Prupe.7G146500_v2.0.a1

The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
N/A
Physical Location & Seq
Forward (+)
15953747 .. 15955318
1572 bp
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UTR
Exon/CDS
Intron
Prupe.7G146500.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 453 bp
ATGTCGATCTTCGAGTACAATGGGAGTGCCCTGATCGCAATGGTGGGCAAGAACTGCTTCGCCATTGCAAGCGATCGAAGGCTCGGTGTTCAGCTCCAGACAATCGCCACCGATTTCCAGAGAATTCATAGAGTTCACGATGGGCTCTTTATCGGCCTCTCTGGTTTCAGAGGCTTTTGTTTCGGCACAAGCTGTACCAGCTTCCCTGTAATTGCTGGATTGGGAGATGAAGGTAAGCCATTCTTCTGCACTATGGATTCAACTGGAGCCAACCAAGATTTTGTTGTTGCTGGCACTGCATCAGAGTCCCTTTATGGTGCTTGTGAGGCAATGTTCAAGTCTGAGATGGAACTGGAACCAGAGGAATTCTTTGAGATTGTTTCTCAAGCATTGCTATCATCAGATGATCAAGATTGTCTGAGTGGGTGGGGAGGCCATGTCTATGTAGTGTAA

Protein Analysis

151

Amino Acids

16.23

Weight (kDa)

4.41

Isoelectric Point (pI)

39.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 123, 365
AfaI GTAC 2 cut(s) 17, 196
AgsI TTSAA 2 cut(s) 261, 337
AluBI AGCT 3 cut(s) 94, 192, 201
AluI AGCT 3 cut(s) 94, 192, 201
AoxI GGCC 2 cut(s) 154, 433
ApoI RAATTY 2 cut(s) 123, 365
Asp700I GAANNNNTTC 1 cut(s) 56
BaeGI GKGCMC 1 cut(s) 31
BanII GRGCYC 1 cut(s) 147
BccI CCATC 2 cut(s) 134, 340
BclI TGATCA 1 cut(s) 406
BmiI GGNNCC 2 cut(s) 268, 357
BmsI GCATC 1 cut(s) 308
BpmI CTGGAG 2 cut(s) 80, 285
BpuEI CTTGAG 1 cut(s) 369
BsaXI ACNNNNNCTCC 2 cut(s) 423, 453
Bse1I ACTGG 2 cut(s) 268, 357
Bse3DI GCAATG 4 cut(s) 45, 63, 336, 389
BseMI GCAATG 4 cut(s) 45, 63, 336, 389
BseMII CTCAG 2 cut(s) 333, 410
BseNI ACTGG 2 cut(s) 268, 357
BseSI GKGCMC 1 cut(s) 31
BsgI GTGCAG 1 cut(s) 232
Bsh1285I CGRYCG 1 cut(s) 76
BshFI GGCC 2 cut(s) 156, 435
BsiEI CGRYCG 1 cut(s) 76
BslFI GGGAC 1 cut(s) 292
BsmFI GGGAC 1 cut(s) 292
BsnI GGCC 2 cut(s) 156, 435
Bsp1286I GDGCHC 2 cut(s) 31, 147
Bsp143I GATC 4 cut(s) 6, 33, 73, 406
BspANI GGCC 2 cut(s) 156, 435
BspCNI CTCAG 2 cut(s) 334, 411
BspLI GGNNCC 2 cut(s) 268, 357
BsrDI GCAATG 4 cut(s) 45, 63, 336, 389
BsrI ACTGG 2 cut(s) 268, 357
BssMI GATC 4 cut(s) 6, 33, 73, 406
BstAPI GCANNNNNTGC 1 cut(s) 54
BstC8I GCNNGC 2 cut(s) 70, 292
BstDEI CTNAG 2 cut(s) 342, 419
BstKTI GATC 4 cut(s) 9, 36, 76, 409
BstMBI GATC 4 cut(s) 6, 33, 73, 406
BstMCI CGRYCG 1 cut(s) 76
BstMWI GCNNNNNNNGC 5 cut(s) 35, 54, 198, 296, 326
BstSLI GKGCMC 1 cut(s) 31
BsuRI GGCC 2 cut(s) 156, 435
BtsI GCAGTG 1 cut(s) 294
BtsIMutI CAGTG 1 cut(s) 294
Cac8I GCNNGC 2 cut(s) 70, 292
Csp6I GTAC 2 cut(s) 16, 195
CviAII CATG 1 cut(s) 437
CviQI GTAC 2 cut(s) 16, 195
DdeI CTNAG 2 cut(s) 342, 419
DpnI GATC 4 cut(s) 8, 35, 75, 408
DpnII GATC 4 cut(s) 6, 33, 73, 406
Eco24I GRGCYC 1 cut(s) 147
EcoRI GAATTC 2 cut(s) 123, 365
EcoT38I GRGCYC 1 cut(s) 147
FaeI CATG 1 cut(s) 440
FaiI YATR 5 cut(s) 129, 254, 315, 438, 444
FalI AAGNNNNNCTT 4 cut(s) 41, 73, 227, 259
FaqI GGGAC 1 cut(s) 292
FatI CATG 1 cut(s) 436
FbaI TGATCA 1 cut(s) 406
FriOI GRGCYC 1 cut(s) 147
GsuI CTGGAG 2 cut(s) 80, 285
HaeIII GGCC 2 cut(s) 156, 435
Hin1II CATG 1 cut(s) 440
HinfI GANTC 2 cut(s) 257, 305
Hpy166II GTNNAC 1 cut(s) 136
Hpy188I TCNGA 5 cut(s) 170, 304, 343, 403, 420
Hpy188III TCNNGA 4 cut(s) 97, 118, 137, 410
Hpy8I GTNNAC 1 cut(s) 136
HpyAV CCTTC 2 cut(s) 72, 224
HpyCH4V TGCA 3 cut(s) 68, 249, 299
HpyF10VI GCNNNNNNNGC 5 cut(s) 35, 54, 198, 296, 326
HpyF3I CTNAG 2 cut(s) 342, 419
Hsp92II CATG 1 cut(s) 440
Ksp22I TGATCA 1 cut(s) 406
Kzo9I GATC 4 cut(s) 6, 33, 73, 406
LmnI GCTCC 2 cut(s) 99, 266
LweI GCATC 1 cut(s) 308
MalI GATC 4 cut(s) 8, 35, 75, 408
MboI GATC 4 cut(s) 6, 33, 73, 406
MboII GAAGA 1 cut(s) 235
MhlI GDGCHC 2 cut(s) 31, 147
MluCI AATT 3 cut(s) 123, 210, 365
MlyI GAGTC 1 cut(s) 314
MnlI CCTC 5 cut(s) 164, 167, 319, 355, 425
MroXI GAANNNNTTC 1 cut(s) 56
MslI CAYNNNNRTG 1 cut(s) 441
MwoI GCNNNNNNNGC 5 cut(s) 35, 54, 198, 296, 326
NdeII GATC 4 cut(s) 6, 33, 73, 406
NlaIII CATG 1 cut(s) 440
NlaIV GGNNCC 2 cut(s) 268, 357
PdmI GAANNNNTTC 1 cut(s) 56
PfeI GAWTC 1 cut(s) 257
Ple19I CGATCG 1 cut(s) 76
PleI GAGTC 1 cut(s) 313
PpsI GAGTC 1 cut(s) 313
PspN4I GGNNCC 2 cut(s) 268, 357
PvuI CGATCG 1 cut(s) 76
RsaI GTAC 2 cut(s) 17, 196
RsaNI GTAC 2 cut(s) 16, 195
RseI CAYNNNNRTG 1 cut(s) 441
Sau3AI GATC 4 cut(s) 6, 33, 73, 406
SchI GAGTC 1 cut(s) 314
SduI GDGCHC 2 cut(s) 31, 147
SetI ASST 4 cut(s) 96, 194, 203, 235
SfaNI GCATC 1 cut(s) 308
SmiMI CAYNNNNRTG 1 cut(s) 441
SmlI CTYRAG 1 cut(s) 384
SmoI CTYRAG 1 cut(s) 384
Sse9I AATT 3 cut(s) 123, 210, 365
TaqI TCGA 3 cut(s) 5, 12, 76
TasI AATT 3 cut(s) 123, 210, 365
TatI WGTACW 1 cut(s) 15
TfiI GAWTC 1 cut(s) 257
TscAI CASTG 1 cut(s) 301
TspDTI ATGAA 2 cut(s) 116, 243
TspRI CASTG 1 cut(s) 301
XapI RAATTY 2 cut(s) 123, 365
XmnI GAANNNNTTC 1 cut(s) 56
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.