Prupe.7G151300_v2.0.a1

Membrane protein-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
N/A
Physical Location & Seq
Reverse (-)
16233970 .. 16236461
2492 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G151300.1_v2.0.a1.CDS.3

Sequence Viewer

Length: 1125 bp
ATGGCTCAAACCAAGGTCACTCGGAGGGCAGCTACAATATCAGCAAGAGTAGCATCAATGGCAATAGCATGGGAACTCTTCATTAACATCCTTATGACAATTGAATGGTCAATTTTCTATGGGAGGCTGGAGGTTGGCTCAATAGTTGGATTCTTTGGTGCAGCACTGGGTAGTGTGGGAGGTGTTGGAGGTGGAGGTATTTTTGTACCAATGCTTGCCTTGATCATTGGTTTTGATCCCAAGTCTTCCACTGCCCTTTCCAAAACTGTATGCCATCCTATTGGTCATGCAGGTTCAACAGTATACTTCAATTTGAGACTTAGGCACCCAACACTGGACATGCCCCTTATAGATTATGATCTGGCTTTACTCTTTCAGCCAATGCTCATGCTAGGCATCAGCATAGGAGTTGCCTTCAACGTCATGTTCGCCGACTGGATGGTCACAGTTCTACCTATCATTCTCTTCTTACGTGCAGCAGCAAAAGCTTTAATGAAAGGCGTAGAAACATGGAAGAAAGAGACAATGATGAAGAAGGAAGCAGAAAAGCAGTTGGAGTCGGAGTCCAAACCTGATGGTTCTGGAGAAGACTACAAACCACTACCTGGTGGTCCTGCTTCATTGCAAGATGAGCAGGTGCCTATATCACACAACGTTTACTGGAAGGAGTTATCGATGCTTGTGTATGTCTGGGTGGCTTTTCTTATTGTTCAGATTGTTAAGGTACCAATTGCAGTCTCCGTTACGCTCTTTGAAGCCATATGCTTATGCAAAGGCACCAGGGTGATTGCATCCAAAGGAAAGGAAATCACAAACTGGAAGTTGCATCAGATTTTTCTTTACTGCAGCTGTGGGATAGTAGCTGGTATGGTGGGTGGCCTACTTGGGCTGGGAGGCGGTTTCATCTTGGGACCCCTTTTTCATGAATTGGGAATTCCTCCTCAGGTAGCAAGTGCTACATCCACATTTGCAATGCTATTCTCATCCTCCATGTCAGTTGTACAGTATTACCTTCCCAACTCTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTATAAATGTAGACAGTAGGCAGGTACTAGAAGAGTGCACTGCACTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TauE

Protein Analysis

375

Amino Acids

41.13

Weight (kDa)

7.01

Isoelectric Point (pI)

34.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1079
AarI CACCTGC 1 cut(s) 625
AasI GACNNNNNNGTC 1 cut(s) 440
Acc36I ACCTGC 3 cut(s) 281, 625, 1087
Acc65I GGTACC 1 cut(s) 724
AccB1I GGYRCC 4 cut(s) 324, 637, 724, 776
AccB7I CCANNNNNTGG 1 cut(s) 605
AccI GTMKAC 2 cut(s) 303, 1086
AciI CCGC 1 cut(s) 897
AclI AACGTT 1 cut(s) 654
AclWI GGATC 1 cut(s) 230
AcsI RAATTY 1 cut(s) 933
AfaI GTAC 4 cut(s) 207, 726, 1002, 1101
AfiI CCNNNNNNNGG 2 cut(s) 334, 605
AgsI TTSAA 5 cut(s) 104, 297, 310, 418, 755
AjnI CCWGG 2 cut(s) 604, 779
AleI CACNNNNGTG 1 cut(s) 782
AluBI AGCT 4 cut(s) 32, 488, 849, 863
AluI AGCT 4 cut(s) 32, 488, 849, 863
Alw21I GWGCWC 1 cut(s) 1115
Alw26I GTCTC 3 cut(s) 310, 515, 742
Alw44I GTGCAC 1 cut(s) 1111
AlwI GGATC 1 cut(s) 230
AoxI GGCC 1 cut(s) 877
ApaLI GTGCAC 1 cut(s) 1111
ApeKI GCWGC 5 cut(s) 29, 161, 476, 479, 846
ApoI RAATTY 1 cut(s) 933
Asp718I GGTACC 1 cut(s) 724
AspS9I GGNCC 2 cut(s) 611, 911
AsuHPI GGTGA 1 cut(s) 796
AvaII GGWCC 2 cut(s) 611, 911
AxyI CCTNAGG 1 cut(s) 942
BaeGI GKGCMC 1 cut(s) 1115
BanI GGYRCC 4 cut(s) 324, 637, 724, 776
BbsI GAAGAC 2 cut(s) 237, 594
Bbv12I GWGCWC 1 cut(s) 1115
BbvI GCAGC 5 cut(s) 41, 173, 488, 491, 858
BccI CCATC 3 cut(s) 282, 433, 569
BciT130I CCWGG 2 cut(s) 606, 781
BclI TGATCA 1 cut(s) 222
BcoDI GTCTC 3 cut(s) 310, 515, 742
BfaI CTAG 2 cut(s) 392, 1103
BfmI CTRYAG 1 cut(s) 844
BfuAI ACCTGC 3 cut(s) 281, 625, 1087
BisI GCNGC 5 cut(s) 30, 162, 477, 480, 847
BlsI GCNGC 5 cut(s) 31, 163, 478, 481, 848
Bme1390I CCNGG 2 cut(s) 606, 781
Bme18I GGWCC 2 cut(s) 611, 911
BmgT120I GGNCC 2 cut(s) 611, 911
BmiI GGNNCC 6 cut(s) 326, 639, 726, 778, 912, 913
BmrFI CCNGG 2 cut(s) 606, 781
BmrI ACTGGG 1 cut(s) 176
BmsI GCATC 5 cut(s) 62, 405, 666, 800, 835
BmuI ACTGGG 1 cut(s) 176
BpiI GAAGAC 2 cut(s) 237, 594
BplI GAGNNNNNCTC 2 cut(s) 122, 154
BpmI CTGGAG 2 cut(s) 149, 603
Bsa29I ATCGAT 1 cut(s) 674
BsaAI YACGTR 1 cut(s) 473
BsaBI GATNNNNATC 1 cut(s) 357
BsaJI CCNNGG 2 cut(s) 12, 780
BsaXI ACNNNNNCTCC 2 cut(s) 548, 578
Bsc4I CCNNNNNNNGG 2 cut(s) 334, 605
Bse1I ACTGG 5 cut(s) 171, 339, 440, 665, 821
Bse21I CCTNAGG 1 cut(s) 942
Bse3DI GCAATG 2 cut(s) 620, 978
Bse8I GATNNNNATC 1 cut(s) 357
BseBI CCWGG 2 cut(s) 606, 781
BseCI ATCGAT 1 cut(s) 674
BseDI CCNNGG 2 cut(s) 12, 780
BseGI GGATG 6 cut(s) 87, 274, 444, 791, 959, 983
BseJI GATNNNNATC 1 cut(s) 357
BseLI CCNNNNNNNGG 2 cut(s) 334, 605
BseMI GCAATG 2 cut(s) 620, 978
BseMII CTCAG 2 cut(s) 956, 1014
BseNI ACTGG 5 cut(s) 171, 339, 440, 665, 821
BseRI GAGGAG 1 cut(s) 930
BseSI GKGCMC 1 cut(s) 1115
BseXI GCAGC 5 cut(s) 41, 173, 488, 491, 858
BseYI CCCAGC 1 cut(s) 889
BsgI GTGCAG 3 cut(s) 180, 495, 1101
BshFI GGCC 1 cut(s) 879
BshNI GGYRCC 4 cut(s) 324, 637, 724, 776
BshVI ATCGAT 1 cut(s) 674
BsiHKAI GWGCWC 1 cut(s) 1115
BslFI GGGAC 1 cut(s) 924
BslI CCNNNNNNNGG 2 cut(s) 334, 605
BsmAI GTCTC 3 cut(s) 310, 515, 742
BsmFI GGGAC 1 cut(s) 924
BsnI GGCC 1 cut(s) 879
Bsp1286I GDGCHC 1 cut(s) 1115
Bsp1407I TGTACA 1 cut(s) 1000
Bsp143I GATC 3 cut(s) 222, 235, 358
BspACI CCGC 1 cut(s) 897
BspANI GGCC 1 cut(s) 879
BspCNI CTCAG 2 cut(s) 955, 1015
BspDI ATCGAT 1 cut(s) 674
BspHI TCATGA 1 cut(s) 922
BspLI GGNNCC 6 cut(s) 326, 639, 726, 778, 912, 913
BspMAI CTGCAG 1 cut(s) 848
BspMI ACCTGC 3 cut(s) 281, 625, 1087
BspPI GGATC 1 cut(s) 230
BspT107I GGYRCC 4 cut(s) 324, 637, 724, 776
BsrDI GCAATG 2 cut(s) 620, 978
BsrGI TGTACA 1 cut(s) 1000
BsrI ACTGG 5 cut(s) 171, 339, 440, 665, 821
BssECI CCNNGG 2 cut(s) 12, 780
BssMI GATC 3 cut(s) 222, 235, 358
BssNAI GTATAC 1 cut(s) 304
BssT1I CCWWGG 1 cut(s) 12
Bst1107I GTATAC 1 cut(s) 304
Bst2UI CCWGG 2 cut(s) 606, 781
Bst4CI ACNGT 5 cut(s) 268, 301, 448, 1005, 1091
Bst6I CTCTTC 3 cut(s) 83, 470, 1101
BstAUI TGTACA 1 cut(s) 1000
BstBAI YACGTR 1 cut(s) 473
BstC8I GCNNGC 1 cut(s) 216
BstDEI CTNAG 3 cut(s) 320, 942, 1023
BstF5I GGATG 6 cut(s) 87, 274, 444, 791, 959, 983
BstKTI GATC 3 cut(s) 225, 238, 361
BstMAI GTCTC 3 cut(s) 310, 515, 742
BstMBI GATC 3 cut(s) 222, 235, 358
BstMWI GCNNNNNNNGC 4 cut(s) 50, 59, 485, 631
BstNI CCWGG 2 cut(s) 606, 781
BstNSI RCATGY 1 cut(s) 343
BstSCI CCNGG 2 cut(s) 604, 779
BstSFI CTRYAG 1 cut(s) 844
BstSLI GKGCMC 1 cut(s) 1115
BstV1I GCAGC 5 cut(s) 41, 173, 488, 491, 858
BstV2I GAAGAC 2 cut(s) 237, 594
BstXI CCANNNNNNTGG 1 cut(s) 281
BstZ17I GTATAC 1 cut(s) 304
Bsu15I ATCGAT 1 cut(s) 674
Bsu36I CCTNAGG 1 cut(s) 942
BsuRI GGCC 1 cut(s) 879
BsuTUI ATCGAT 1 cut(s) 674
BtsCI GGATG 6 cut(s) 87, 274, 444, 791, 959, 983
BtsI GCAGTG 2 cut(s) 249, 1113
BtsIMutI CAGTG 4 cut(s) 164, 249, 332, 1113
BveI ACCTGC 3 cut(s) 281, 625, 1087
Cac8I GCNNGC 1 cut(s) 216
CciI TCATGA 1 cut(s) 922
Cfr13I GGNCC 2 cut(s) 611, 911
ClaI ATCGAT 1 cut(s) 674
CsiI ACCWGGT 1 cut(s) 604
Csp6I GTAC 4 cut(s) 206, 725, 1001, 1100
CviAII CATG 8 cut(s) 69, 287, 340, 388, 424, 510, 923, 991
CviQI GTAC 4 cut(s) 206, 725, 1001, 1100
DdeI CTNAG 3 cut(s) 320, 942, 1023
DpnI GATC 3 cut(s) 224, 237, 360
DpnII GATC 3 cut(s) 222, 235, 358
DrdI GACNNNNNNGTC 1 cut(s) 440
DseDI GACNNNNNNGTC 1 cut(s) 440
Eam1104I CTCTTC 3 cut(s) 83, 470, 1101
EarI CTCTTC 3 cut(s) 83, 470, 1101
Eco130I CCWWGG 1 cut(s) 12
Eco47I GGWCC 2 cut(s) 611, 911
Eco81I CCTNAGG 1 cut(s) 942
EcoO109I RGGNCCY 1 cut(s) 911
EcoRI GAATTC 1 cut(s) 933
EcoRII CCWGG 2 cut(s) 604, 779
EcoT14I CCWWGG 1 cut(s) 12
ErhI CCWWGG 1 cut(s) 12
FaeI CATG 8 cut(s) 72, 290, 343, 391, 427, 513, 926, 994
FaqI GGGAC 1 cut(s) 924
FatI CATG 8 cut(s) 68, 286, 339, 387, 423, 509, 922, 990
FauNDI CATATG 1 cut(s) 761
FbaI TGATCA 1 cut(s) 222
FblI GTMKAC 2 cut(s) 303, 1086
Fnu4HI GCNGC 5 cut(s) 30, 162, 477, 480, 847
FokI GGATG 6 cut(s) 74, 261, 451, 778, 946, 970
Fsp4HI GCNGC 5 cut(s) 30, 162, 477, 480, 847
FspBI CTAG 2 cut(s) 392, 1103
GluI GCNGC 5 cut(s) 30, 162, 477, 480, 847
GsaI CCCAGC 1 cut(s) 893
GsuI CTGGAG 2 cut(s) 149, 603
HaeIII GGCC 1 cut(s) 879
Hin1II CATG 8 cut(s) 72, 290, 343, 391, 427, 513, 926, 994
HindIII AAGCTT 1 cut(s) 486
HinfI GANTC 3 cut(s) 150, 557, 563
HphI GGTGA 1 cut(s) 796
Hpy166II GTNNAC 4 cut(s) 304, 658, 1087, 1113
Hpy188I TCNGA 5 cut(s) 24, 562, 714, 831, 1024
Hpy188III TCNNGA 2 cut(s) 582, 923
Hpy8I GTNNAC 4 cut(s) 304, 658, 1087, 1113
HpyAV CCTTC 4 cut(s) 424, 529, 658, 1022
HpyCH4III ACNGT 5 cut(s) 268, 301, 448, 1005, 1091
HpyCH4IV ACGT 3 cut(s) 420, 472, 654
HpyF10VI GCNNNNNNNGC 4 cut(s) 50, 59, 485, 631
HpyF3I CTNAG 3 cut(s) 320, 942, 1023
HpySE526I ACGT 3 cut(s) 420, 472, 654
Hsp92II CATG 8 cut(s) 72, 290, 343, 391, 427, 513, 926, 994
KflI GGGWCCC 1 cut(s) 911
KpnI GGTACC 1 cut(s) 728
Ksp22I TGATCA 1 cut(s) 222
Kzo9I GATC 3 cut(s) 222, 235, 358
Lsp1109I GCAGC 5 cut(s) 41, 173, 488, 491, 858
LweI GCATC 5 cut(s) 62, 405, 666, 800, 835
MabI ACCWGGT 1 cut(s) 604
MaeI CTAG 2 cut(s) 392, 1103
MaeII ACGT 3 cut(s) 420, 472, 654
MaeIII GTNAC 3 cut(s) 16, 442, 742
MalI GATC 3 cut(s) 224, 237, 360
MboI GATC 3 cut(s) 222, 235, 358
MboII GAAGA 7 cut(s) 70, 237, 457, 526, 544, 599, 1118
MfeI CAATTG 2 cut(s) 99, 729
MhlI GDGCHC 1 cut(s) 1115
MluCI AATT 6 cut(s) 99, 111, 310, 729, 926, 933
MlyI GAGTC 2 cut(s) 566, 572
MmeI TCCRAC 4 cut(s) 127, 166, 534, 540
MseI TTAA 4 cut(s) 84, 491, 720, 1123
MslI CAYNNNNRTG 2 cut(s) 92, 782
MspA1I CMGCKG 1 cut(s) 849
MspR9I CCNGG 2 cut(s) 606, 781
MunI CAATTG 2 cut(s) 99, 729
MvaI CCWGG 2 cut(s) 606, 781
MwoI GCNNNNNNNGC 4 cut(s) 50, 59, 485, 631
NdeI CATATG 1 cut(s) 761
NdeII GATC 3 cut(s) 222, 235, 358
NlaIII CATG 8 cut(s) 72, 290, 343, 391, 427, 513, 926, 994
NlaIV GGNNCC 6 cut(s) 326, 639, 726, 778, 912, 913
NmuCI GTSAC 2 cut(s) 16, 442
NspI RCATGY 1 cut(s) 343
OliI CACNNNNGTG 1 cut(s) 782
PagI TCATGA 1 cut(s) 922
PaqCI CACCTGC 1 cut(s) 625
PfeI GAWTC 1 cut(s) 150
PflMI CCANNNNNTGG 1 cut(s) 605
PkrI GCNGC 5 cut(s) 31, 163, 478, 481, 848
PleI GAGTC 2 cut(s) 565, 571
PpsI GAGTC 2 cut(s) 565, 571
Ppu21I YACGTR 1 cut(s) 473
PpuMI RGGWCCY 1 cut(s) 911
PsiI TTATAA 1 cut(s) 1079
Psp1406I AACGTT 1 cut(s) 654
Psp5II RGGWCCY 1 cut(s) 911
Psp6I CCWGG 2 cut(s) 604, 779
PspFI CCCAGC 1 cut(s) 889
PspGI CCWGG 2 cut(s) 604, 779
PspN4I GGNNCC 6 cut(s) 326, 639, 726, 778, 912, 913
PspPI GGNCC 2 cut(s) 611, 911
PspPPI RGGWCCY 1 cut(s) 911
PstI CTGCAG 1 cut(s) 848
PvuII CAGCTG 1 cut(s) 849
RsaI GTAC 4 cut(s) 207, 726, 1002, 1101
RsaNI GTAC 4 cut(s) 206, 725, 1001, 1100
RseI CAYNNNNRTG 2 cut(s) 92, 782
SaqAI TTAA 4 cut(s) 84, 491, 720, 1123
SatI GCNGC 5 cut(s) 30, 162, 477, 480, 847
Sau3AI GATC 3 cut(s) 222, 235, 358
Sau96I GGNCC 2 cut(s) 611, 911
SchI GAGTC 2 cut(s) 566, 572
ScrFI CCNGG 2 cut(s) 606, 781
SduI GDGCHC 1 cut(s) 1115
SexAI ACCWGGT 1 cut(s) 604
SfaNI GCATC 5 cut(s) 62, 405, 666, 800, 835
SfcI CTRYAG 1 cut(s) 844
SinI GGWCC 2 cut(s) 611, 911
SmiMI CAYNNNNRTG 2 cut(s) 92, 782
Sse9I AATT 6 cut(s) 99, 111, 310, 729, 926, 933
SsiI CCGC 1 cut(s) 897
SspMI CTAG 2 cut(s) 392, 1103
StyD4I CCNGG 2 cut(s) 604, 779
StyI CCWWGG 1 cut(s) 12
TaaI ACNGT 5 cut(s) 268, 301, 448, 1005, 1091
TaiI ACGT 3 cut(s) 423, 475, 657
TaqI TCGA 1 cut(s) 674
TasI AATT 6 cut(s) 99, 111, 310, 729, 926, 933
TatI WGTACW 1 cut(s) 1000
TfiI GAWTC 1 cut(s) 150
Tru1I TTAA 4 cut(s) 84, 491, 720, 1123
Tru9I TTAA 4 cut(s) 84, 491, 720, 1123
TscAI CASTG 4 cut(s) 171, 256, 339, 1120
TseFI GTSAC 2 cut(s) 16, 442
TseI GCWGC 5 cut(s) 29, 161, 476, 479, 846
Tsp45I GTSAC 2 cut(s) 16, 442
TspDTI ATGAA 7 cut(s) 70, 509, 545, 609, 892, 911, 939
TspGWI ACGGA 1 cut(s) 730
TspRI CASTG 4 cut(s) 171, 256, 339, 1120
Van91I CCANNNNNTGG 1 cut(s) 605
VneI GTGCAC 1 cut(s) 1111
VpaK11BI GGWCC 2 cut(s) 611, 911
XapI RAATTY 1 cut(s) 933
XceI RCATGY 1 cut(s) 343
XmiI GTMKAC 2 cut(s) 303, 1086
XspI CTAG 2 cut(s) 392, 1103
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.