Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

16717916 .. 16718749

Gene Structure 834 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G160900.1_v2.0.a1.CDS.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 360 bp

ATGGTTGATGGGTCTAGCCTCCAGAGTAATTATAATATGGGATCCCTGACATCTTTACCTAAGGATTATCAACATACACCAACTGTGAATCGGCCAAGCAGAAATCCAGGGGAAGGAGATGGCAAGGGGGGACCAAATGATAGGCTTGTCAGGATCCGCAACATATTTACACTCTGTGGAAACTACAGAGAGCTCTCTCAACATGTGACAACTCCAGCACCTACTGTTGCATCAGTTAAATCAGAAAATGAGCAGAAACTGACAGAAGAGATAAACAAAAGTCGAGTATGTGATGAGATGGCATTGGCTTCCAAGGAGAACTACAACCCTTCACTGATGCGGATACTGAAGTGTATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005856 GO:0005871 GO:0005875 GO:0006810 GO:0006928 GO:0007017 GO:0007018 GO:0008017 GO:0008092 GO:0008150 GO:0008574 GO:0009524 GO:0009987 GO:0010970 GO:0015630 GO:0015631 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0030705 GO:0032991 GO:0042623 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0046907 GO:0047496 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0072384 GO:0099111 GO:0099518 GO:1990939

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Kinesin

Protein Analysis

120

Amino Acids

13.23

Weight (kDa)

8.49

Isoelectric Point (pI)

47.33

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	33
AciI	CCGC	2 cut(s)	157, 340
AclWI	GGATC	4 cut(s)	36, 49, 148, 161
AcoI	YGGCCR	1 cut(s)	92
AdeI	CACNNNGTG	1 cut(s)	176
AfiI	CCNNNNNNNGG	1 cut(s)	113
AflIII	ACRYGT	1 cut(s)	202
AjnI	CCWGG	1 cut(s)	106
AluBI	AGCT	1 cut(s)	193
AluI	AGCT	1 cut(s)	193
Alw21I	GWGCWC	1 cut(s)	195
AlwI	GGATC	4 cut(s)	36, 49, 148, 161
AlwNI	CAGNNNCTG	1 cut(s)	259
AoxI	GGCC	1 cut(s)	92
AspS9I	GGNCC	1 cut(s)	131
AvaII	GGWCC	1 cut(s)	131
AxyI	CCTNAGG	1 cut(s)	60
BaeI	ACNNNNGTAYC	1 cut(s)	335
BamHI	GGATCC	2 cut(s)	41, 153
BanII	GRGCYC	1 cut(s)	195
Bbv12I	GWGCWC	1 cut(s)	195
BccI	CCATC	3 cut(s)	2, 113, 292
BciT130I	CCWGG	1 cut(s)	108
BciVI	GTATCC	1 cut(s)	336
BfaI	CTAG	1 cut(s)	15
BfmI	CTRYAG	1 cut(s)	184
BfuI	GTATCC	1 cut(s)	336
Bme1390I	CCNGG	1 cut(s)	108
Bme18I	GGWCC	1 cut(s)	131
BmgT120I	GGNCC	1 cut(s)	131
BmiI	GGNNCC	3 cut(s)	43, 132, 155
BmrFI	CCNGG	1 cut(s)	108
BmsI	GCATC	2 cut(s)	239, 327
BpmI	CTGGAG	2 cut(s)	5, 198
BsaJI	CCNNGG	2 cut(s)	107, 312
Bsc4I	CCNNNNNNNGG	1 cut(s)	113
Bse21I	CCTNAGG	1 cut(s)	60
BseBI	CCWGG	1 cut(s)	108
BseDI	CCNNGG	2 cut(s)	107, 312
BseLI	CCNNNNNNNGG	1 cut(s)	113
BshFI	GGCC	1 cut(s)	94
BsiHKAI	GWGCWC	1 cut(s)	195
BslFI	GGGAC	1 cut(s)	144
BslI	CCNNNNNNNGG	1 cut(s)	113
BsmFI	GGGAC	1 cut(s)	144
BsnI	GGCC	1 cut(s)	94
Bsp1286I	GDGCHC	1 cut(s)	195
Bsp143I	GATC	2 cut(s)	41, 153
BspACI	CCGC	2 cut(s)	157, 340
BspANI	GGCC	1 cut(s)	94
BspLI	GGNNCC	3 cut(s)	43, 132, 155
BspPI	GGATC	4 cut(s)	36, 49, 148, 161
BssECI	CCNNGG	2 cut(s)	107, 312
BssMI	GATC	2 cut(s)	41, 153
BssT1I	CCWWGG	1 cut(s)	312
Bst2UI	CCWGG	1 cut(s)	108
Bst4CI	ACNGT	2 cut(s)	85, 226
Bst6I	CTCTTC	1 cut(s)	261
BstDEI	CTNAG	1 cut(s)	60
BstKTI	GATC	2 cut(s)	44, 156
BstMBI	GATC	2 cut(s)	41, 153
BstNI	CCWGG	1 cut(s)	108
BstNSI	RCATGY	1 cut(s)	206
BstSCI	CCNGG	1 cut(s)	106
BstSFI	CTRYAG	1 cut(s)	184
BstX2I	RGATCY	2 cut(s)	41, 153
BstYI	RGATCY	2 cut(s)	41, 153
Bsu36I	CCTNAGG	1 cut(s)	60
BsuI	GTATCC	1 cut(s)	336
BsuRI	GGCC	1 cut(s)	94
BtsIMutI	CAGTG	1 cut(s)	332
CaiI	CAGNNNCTG	1 cut(s)	259
Cfr13I	GGNCC	1 cut(s)	131
CviAII	CATG	1 cut(s)	203
CviJI	RGCY	5 cut(s)	18, 94, 145, 193, 308
CviKI_1	RGCY	5 cut(s)	18, 94, 145, 193, 308
DdeI	CTNAG	1 cut(s)	60
DpnI	GATC	2 cut(s)	43, 155
DpnII	GATC	2 cut(s)	41, 153
DraIII	CACNNNGTG	1 cut(s)	176
EaeI	YGGCCR	1 cut(s)	92
Eam1104I	CTCTTC	1 cut(s)	261
EarI	CTCTTC	1 cut(s)	261
Ecl136II	GAGCTC	1 cut(s)	193
Eco130I	CCWWGG	1 cut(s)	312
Eco24I	GRGCYC	1 cut(s)	195
Eco47I	GGWCC	1 cut(s)	131
Eco53kI	GAGCTC	1 cut(s)	193
Eco81I	CCTNAGG	1 cut(s)	60
EcoICRI	GAGCTC	1 cut(s)	193
EcoRII	CCWGG	1 cut(s)	106
EcoT14I	CCWWGG	1 cut(s)	312
EcoT38I	GRGCYC	1 cut(s)	195
ErhI	CCWWGG	1 cut(s)	312
FaeI	CATG	1 cut(s)	206
FaiI	YATR	7 cut(s)	33, 38, 75, 164, 204, 289, 356
FaqI	GGGAC	1 cut(s)	144
FatI	CATG	1 cut(s)	202
FriOI	GRGCYC	1 cut(s)	195
FspBI	CTAG	1 cut(s)	15
GsuI	CTGGAG	2 cut(s)	5, 198
HaeIII	GGCC	1 cut(s)	94
Hin1II	CATG	1 cut(s)	206
HinfI	GANTC	1 cut(s)	88
Hpy188I	TCNGA	1 cut(s)	244
Hpy188III	TCNNGA	2 cut(s)	22, 151
HpyAV	CCTTC	2 cut(s)	107, 339
HpyCH4III	ACNGT	2 cut(s)	85, 226
HpyCH4V	TGCA	1 cut(s)	230
HpyF3I	CTNAG	1 cut(s)	60
Hsp92II	CATG	1 cut(s)	206
Kzo9I	GATC	2 cut(s)	41, 153
LpnPI	CCDG	6 cut(s)	35, 59, 93, 120, 136, 228
LweI	GCATC	2 cut(s)	239, 327
MaeI	CTAG	1 cut(s)	15
MaeIII	GTNAC	1 cut(s)	205
MalI	GATC	2 cut(s)	43, 155
MboI	GATC	2 cut(s)	41, 153
MboII	GAAGA	1 cut(s)	278
MflI	RGATCY	2 cut(s)	41, 153
MhlI	GDGCHC	1 cut(s)	195
MluCI	AATT	1 cut(s)	28
MnlI	CCTC	1 cut(s)	29
MseI	TTAA	1 cut(s)	237
MspR9I	CCNGG	1 cut(s)	108
MvaI	CCWGG	1 cut(s)	108
NdeII	GATC	2 cut(s)	41, 153
NlaIII	CATG	1 cut(s)	206
NlaIV	GGNNCC	3 cut(s)	43, 132, 155
NmuCI	GTSAC	1 cut(s)	205
NspI	RCATGY	1 cut(s)	206
PciI	ACATGT	1 cut(s)	202
PfeI	GAWTC	1 cut(s)	88
PscI	ACATGT	1 cut(s)	202
PsiI	TTATAA	1 cut(s)	33
Psp124BI	GAGCTC	1 cut(s)	195
Psp6I	CCWGG	1 cut(s)	106
PspGI	CCWGG	1 cut(s)	106
PspN4I	GGNNCC	3 cut(s)	43, 132, 155
PspPI	GGNCC	1 cut(s)	131
PstNI	CAGNNNCTG	1 cut(s)	259
PsuI	RGATCY	2 cut(s)	41, 153
SacI	GAGCTC	1 cut(s)	195
SaqAI	TTAA	1 cut(s)	237
Sau3AI	GATC	2 cut(s)	41, 153
Sau96I	GGNCC	1 cut(s)	131
ScrFI	CCNGG	1 cut(s)	108
SduI	GDGCHC	1 cut(s)	195
SetI	ASST	3 cut(s)	61, 195, 223
SfaNI	GCATC	2 cut(s)	239, 327
SfcI	CTRYAG	1 cut(s)	184
SinI	GGWCC	1 cut(s)	131
Sse9I	AATT	1 cut(s)	28
SsiI	CCGC	2 cut(s)	157, 340
SspMI	CTAG	1 cut(s)	15
SstI	GAGCTC	1 cut(s)	195
StyD4I	CCNGG	1 cut(s)	106
StyI	CCWWGG	1 cut(s)	312
TaaI	ACNGT	2 cut(s)	85, 226
TaqI	TCGA	1 cut(s)	283
TasI	AATT	1 cut(s)	28
TfiI	GAWTC	1 cut(s)	88
Tru1I	TTAA	1 cut(s)	237
Tru9I	TTAA	1 cut(s)	237
TscAI	CASTG	1 cut(s)	339
TseFI	GTSAC	1 cut(s)	205
Tsp45I	GTSAC	1 cut(s)	205
TspRI	CASTG	1 cut(s)	339
VpaK11BI	GGWCC	1 cut(s)	131
XceI	RCATGY	1 cut(s)	206
XspI	CTAG	1 cut(s)	15

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.