Prupe.7G179800_v2.0.a1

Protein of unknown function, DUF538

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
N/A
Physical Location & Seq
Forward (+)
17651225 .. 17654856
3632 bp
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UTR
Exon/CDS
Intron
Prupe.7G179800.1_v2.0.a1.CDS.2

Sequence Viewer

Length: 213 bp
ATGGACGAAATCAGAGTCGATTTGCCGCCTTCTTATAGCATTTACTTCATGGTGGGAATCATTAACAAGAAGCTCGATGTGGATCAGTTCCAAAAATGTCCATTCTTGCCGCAGTGGGCTATCGGGTTCTTGTCTCGGATCGTTGAAACGGGGCATCCAGTGGTCGTCACGAGTGACGTACTCAAGAAGTGGCTCCAGTATGCCGTCGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

71

Amino Acids

8.08

Weight (kDa)

6.52

Isoelectric Point (pI)

33.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 26, 110
AclWI GGATC 2 cut(s) 90, 146
AfaI GTAC 1 cut(s) 180
AgsI TTSAA 1 cut(s) 146
AluBI AGCT 1 cut(s) 73
AluI AGCT 1 cut(s) 73
Alw26I GTCTC 1 cut(s) 138
AlwI GGATC 2 cut(s) 90, 146
ArsI GACNNNNNNTTYG 1 cut(s) 32
BauI CACGAG 1 cut(s) 169
BceAI ACGGC 1 cut(s) 188
BcoDI GTCTC 1 cut(s) 138
BisI GCNGC 2 cut(s) 26, 110
BlsI GCNGC 2 cut(s) 27, 111
BmiI GGNNCC 1 cut(s) 194
BmsI GCATC 1 cut(s) 163
BpmI CTGGAG 1 cut(s) 179
BpuEI CTTGAG 1 cut(s) 167
BsaBI GATNNNNATC 1 cut(s) 81
Bse1I ACTGG 2 cut(s) 158, 196
Bse8I GATNNNNATC 1 cut(s) 81
BseGI GGATG 1 cut(s) 154
BseJI GATNNNNATC 1 cut(s) 81
BseNI ACTGG 2 cut(s) 158, 196
BsmAI GTCTC 1 cut(s) 138
Bsp143I GATC 2 cut(s) 82, 138
BspACI CCGC 2 cut(s) 26, 110
BspLI GGNNCC 1 cut(s) 194
BspPI GGATC 2 cut(s) 90, 146
BsrI ACTGG 2 cut(s) 158, 196
BssMI GATC 2 cut(s) 82, 138
BssSI CACGAG 1 cut(s) 169
Bst2BI CACGAG 1 cut(s) 169
BstF5I GGATG 1 cut(s) 154
BstKTI GATC 2 cut(s) 85, 141
BstMAI GTCTC 1 cut(s) 138
BstMBI GATC 2 cut(s) 82, 138
BtsCI GGATG 1 cut(s) 154
BtsI GCAGTG 1 cut(s) 119
BtsIMutI CAGTG 2 cut(s) 119, 165
Csp6I GTAC 1 cut(s) 179
CviAII CATG 1 cut(s) 49
CviJI RGCY 3 cut(s) 73, 119, 193
CviKI_1 RGCY 3 cut(s) 73, 119, 193
CviQI GTAC 1 cut(s) 179
DpnI GATC 2 cut(s) 84, 140
DpnII GATC 2 cut(s) 82, 138
FaeI CATG 1 cut(s) 52
FaiI YATR 3 cut(s) 36, 50, 201
FatI CATG 1 cut(s) 48
Fnu4HI GCNGC 2 cut(s) 26, 110
FokI GGATG 1 cut(s) 141
Fsp4HI GCNGC 2 cut(s) 26, 110
GluI GCNGC 2 cut(s) 26, 110
GsuI CTGGAG 1 cut(s) 179
Hin1II CATG 1 cut(s) 52
HinfI GANTC 2 cut(s) 15, 57
Hpy188I TCNGA 2 cut(s) 14, 138
Hpy188III TCNNGA 2 cut(s) 169, 184
Hpy99I CGWCG 1 cut(s) 209
HpyAV CCTTC 1 cut(s) 39
HpyCH4IV ACGT 1 cut(s) 177
HpySE526I ACGT 1 cut(s) 177
Hsp92II CATG 1 cut(s) 52
Kzo9I GATC 2 cut(s) 82, 138
LmnI GCTCC 1 cut(s) 198
LpnPI CCDG 2 cut(s) 171, 209
LweI GCATC 1 cut(s) 163
MaeII ACGT 1 cut(s) 177
MaeIII GTNAC 2 cut(s) 166, 173
MalI GATC 2 cut(s) 84, 140
MboI GATC 2 cut(s) 82, 138
MlyI GAGTC 1 cut(s) 24
MseI TTAA 1 cut(s) 63
NdeII GATC 2 cut(s) 82, 138
NlaIII CATG 1 cut(s) 52
NlaIV GGNNCC 1 cut(s) 194
NmuCI GTSAC 2 cut(s) 166, 173
PfeI GAWTC 1 cut(s) 57
PkrI GCNGC 2 cut(s) 27, 111
PleI GAGTC 1 cut(s) 23
PpsI GAGTC 1 cut(s) 23
PspN4I GGNNCC 1 cut(s) 194
RsaI GTAC 1 cut(s) 180
RsaNI GTAC 1 cut(s) 179
SaqAI TTAA 1 cut(s) 63
SatI GCNGC 2 cut(s) 26, 110
Sau3AI GATC 2 cut(s) 82, 138
SchI GAGTC 1 cut(s) 24
SetI ASST 2 cut(s) 75, 180
SfaNI GCATC 1 cut(s) 163
SmlI CTYRAG 1 cut(s) 182
SmoI CTYRAG 1 cut(s) 182
SsiI CCGC 2 cut(s) 26, 110
TaiI ACGT 1 cut(s) 180
TaqI TCGA 2 cut(s) 18, 75
TauI GCSGC 2 cut(s) 28, 112
TfiI GAWTC 1 cut(s) 57
Tru1I TTAA 1 cut(s) 63
Tru9I TTAA 1 cut(s) 63
TscAI CASTG 2 cut(s) 119, 165
TseFI GTSAC 2 cut(s) 166, 173
Tsp45I GTSAC 2 cut(s) 166, 173
TspDTI ATGAA 1 cut(s) 37
TspRI CASTG 2 cut(s) 119, 165
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.