Prupe.7G221800_v2.0.a1

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
N/A
Physical Location & Seq
Reverse (-)
19808945 .. 19811617
2673 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G221800.1_v2.0.a1.CDS.3

Sequence Viewer

Length: 258 bp
ATGGGAAGTAAAAATCCACAGGCAATCCCAATTTCCATATTGATAGTTCTGTTGAGAGACTCATTCTGGGAGGATTGTCTGGTGGGTAATTTATACTTGCTTCGAATTGGTCAGGCATTATGCAAATATCTTACCGGTGCCTTCGATGTGATCAAAACAAGATTGCAAGTACAGGGATCAACCTTGAGGTACAATGGCTGTTATATGCAAAGTAGCATAAGGATGGCTGACGATGCACAGGAGGTTGCTCAGAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

86

Amino Acids

9.57

Weight (kDa)

8.55

Isoelectric Point (pI)

37.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 137
AclWI GGATC 1 cut(s) 184
AfaI GTAC 2 cut(s) 171, 191
AgeI ACCGGT 1 cut(s) 134
Alw26I GTCTC 1 cut(s) 51
AlwI GGATC 1 cut(s) 184
AsiGI ACCGGT 1 cut(s) 134
AsuII TTCGAA 1 cut(s) 103
BanI GGYRCC 1 cut(s) 137
BccI CCATC 1 cut(s) 217
BclI TGATCA 1 cut(s) 150
BcoDI GTCTC 1 cut(s) 51
BmiI GGNNCC 1 cut(s) 139
BmsI GCATC 1 cut(s) 223
Bpu14I TTCGAA 1 cut(s) 103
BpuEI CTTGAG 1 cut(s) 205
BsaWI WCCGGW 1 cut(s) 134
Bse118I RCCGGY 1 cut(s) 134
BseGI GGATG 1 cut(s) 228
BshNI GGYRCC 1 cut(s) 137
BshTI ACCGGT 1 cut(s) 134
BsiSI CCGG 1 cut(s) 135
BsmAI GTCTC 1 cut(s) 51
Bsp119I TTCGAA 1 cut(s) 103
Bsp143I GATC 2 cut(s) 150, 176
BspLI GGNNCC 1 cut(s) 139
BspPI GGATC 1 cut(s) 184
BspT104I TTCGAA 1 cut(s) 103
BspT107I GGYRCC 1 cut(s) 137
BsrFI RCCGGY 1 cut(s) 134
BssAI RCCGGY 1 cut(s) 134
BssMI GATC 2 cut(s) 150, 176
BstBI TTCGAA 1 cut(s) 103
BstDEI CTNAG 1 cut(s) 249
BstF5I GGATG 1 cut(s) 228
BstKTI GATC 2 cut(s) 153, 179
BstMAI GTCTC 1 cut(s) 51
BstMBI GATC 2 cut(s) 150, 176
BstMWI GCNNNNNNNGC 1 cut(s) 233
BtsCI GGATG 1 cut(s) 228
Cfr10I RCCGGY 1 cut(s) 134
Csp6I GTAC 2 cut(s) 170, 190
CspAI ACCGGT 1 cut(s) 134
CviJI RGCY 2 cut(s) 198, 227
CviKI_1 RGCY 2 cut(s) 198, 227
CviQI GTAC 2 cut(s) 170, 190
DdeI CTNAG 1 cut(s) 249
DpnI GATC 2 cut(s) 152, 178
DpnII GATC 2 cut(s) 150, 176
FaiI YATR 6 cut(s) 38, 94, 121, 204, 206, 218
FbaI TGATCA 1 cut(s) 150
FokI GGATG 1 cut(s) 235
HapII CCGG 1 cut(s) 135
HinfI GANTC 1 cut(s) 59
HpaII CCGG 1 cut(s) 135
Hpy188I TCNGA 1 cut(s) 252
HpyAV CCTTC 1 cut(s) 151
HpyCH4V TGCA 4 cut(s) 123, 166, 208, 236
HpyF10VI GCNNNNNNNGC 1 cut(s) 233
HpyF3I CTNAG 1 cut(s) 249
Ksp22I TGATCA 1 cut(s) 150
Kzo9I GATC 2 cut(s) 150, 176
LpnPI CCDG 7 cut(s) 5, 52, 65, 98, 148, 158, 224
LweI GCATC 1 cut(s) 223
MalI GATC 2 cut(s) 152, 178
MboI GATC 2 cut(s) 150, 176
MluCI AATT 3 cut(s) 30, 88, 105
MlyI GAGTC 1 cut(s) 53
MnlI CCTC 4 cut(s) 64, 180, 235, 246
MslI CAYNNNNRTG 1 cut(s) 221
MspI CCGG 1 cut(s) 135
MwoI GCNNNNNNNGC 1 cut(s) 233
NdeII GATC 2 cut(s) 150, 176
NlaIV GGNNCC 1 cut(s) 139
NspV TTCGAA 1 cut(s) 103
PinAI ACCGGT 1 cut(s) 134
PleI GAGTC 1 cut(s) 53
PpsI GAGTC 1 cut(s) 53
PspN4I GGNNCC 1 cut(s) 139
RsaI GTAC 2 cut(s) 171, 191
RsaNI GTAC 2 cut(s) 170, 190
RseI CAYNNNNRTG 1 cut(s) 221
Sau3AI GATC 2 cut(s) 150, 176
SchI GAGTC 1 cut(s) 53
SetI ASST 4 cut(s) 185, 191, 246, 257
SfaNI GCATC 1 cut(s) 223
SfuI TTCGAA 1 cut(s) 103
SmiMI CAYNNNNRTG 1 cut(s) 221
SmlI CTYRAG 1 cut(s) 184
SmoI CTYRAG 1 cut(s) 184
Sse9I AATT 3 cut(s) 30, 88, 105
TaqI TCGA 2 cut(s) 103, 144
TasI AATT 3 cut(s) 30, 88, 105
TatI WGTACW 1 cut(s) 169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.