Prupe.7G222200_v2.0.a1

SNW SKI-interacting

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
N/A
Physical Location & Seq
Reverse (-)
19827771 .. 19829357
1587 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G222200.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 1587 bp
ATGGGCAGGGACAAGTTGTCCAAACCCGGTACGAACATACTTCCGGTTACAGTTAATGCCAGGGGGAATGTCAGGTATGATGCCATTGTTAAGCAGAACGAGAACTCGAAAAAACTTGTCTACTCACAGCACAAGGATCTTGTGCCGAAAATTTTGAAGAATGAGGATGAGGAGATGGATGATGCGAATGAGAAAGAGGAGAAGTTGCAGAAGGAGATTGAAGAAACAACAGCAGAAACAAAAGCTGCGCTTGAGAAGATTGTGAATGTGAGATTGAGCACTGCACAGCCGAAAAATATAGCCAAGCAGTCGACTGGCTCGAAAATTATCAAGTACATGTCATCGCAGAAGGCAGCGGCGTTTAATTCTGGTGCCAAGGCGAGGATTATCAGGATGGCGGAGATGCCTGTGGACCCACTTGAGCCTCCTAAGTTCAAGCATAAGCGTGTTCCGAGGCCTTCTAGGTCCCCGCCTGTGCCGGTCATGCATTCCCCGCCACGGCCGGTGACTGTGAAAGACCTGAAGGATTGGAAGATTCCACCTTGTATTTCAAATTGGAAGAACCAGAAAGGGTATACGATCCCATTGGACAAACGTCTTGCAGCCGAGGGGAAAATCCTTCAAGATCTTGGTGGTCCGTTTCTTGATAATTTGGCAAAGCTTAATGAGGCTTTGTATGTAGCAGAGCAGAAGGCTAGAGAAGGAATTGCCATGAGAAAAAAAGTTCAGGAGGAAATGTTGACGAAGGAGAAGGAAAAGAAGGAGCAGGACTTGAGGATATTAGCTCAGAGGGCTCGTTCCGAAAGAATGGGTGCTGCAGCCCCTCCATCAATGCCTTCTAACAGAACAGCAATGGACAATGATGCGGGAGGGGATTATGAGCGTCCAACAAGCGAAAAAGAGACTGATTATCCGAAGGAGACGAGAGAGGAAAGAGAAGGGAGGTTGAAGCGGGAGAAGATCCGTGAGGAGCGACGAAGAGAAAGGGAAAGGGAGAGAAGGTTGGAGCCCAAAGATGCACCAATGGGGAAGAAAAGTAAAATTACAAGAGACCGAGATCGGGATATCAGTGAGAAAGTTGCCCTCGGCATGGCTTCTGATGGTGCAAGCAGAGGAGGAGAGGTTATGTATGACCAGAGGCTGTTCAACCAGGAGAAAGGAATGGAATCTGGGTTTGCCACTGATGACCAGTACAACGTTTATGACAAGGGCTTGTCCACTGCTCCGCCTACGCTCTCAACCTTGTACAGGCCTAAGAAGGATGTTGATAATGAAATGTACGGAGGTGCTGATGAGCAGTTGGATAAGATTAAGAAAACTGATCGCTTCAAACCTGACAAAGGATTTGGAGGAGCTGCTGAGAGGGCAGGTCCAAGAGGGCGACCGGTCGAGTTTGAGAAAGATGCTGCTGAAGAAGCCGATCCATTTGGTCTGGACCGGTTCTTGACAGAGGTGAAACAGAGCACGAAAGCCAAGGAAAAGGTTGGAACAGGAGGGGCAATGAGAGCAAGTGCAGGGCCTTCAATGCGAGATGGCTACCAAGGGGGCTCCAGCAGAACCCGTATTGGATTCGAAAGGGGTCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000122 GO:0000350 GO:0000375 GO:0000377 GO:0000393 GO:0000398 GO:0001101 GO:0003006 GO:0003674 GO:0003676 GO:0003712 GO:0003713 GO:0003714 GO:0003723 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005730 GO:0006139 GO:0006355 GO:0006357 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006915 GO:0006950 GO:0006970 GO:0006974 GO:0007154 GO:0007165 GO:0007275 GO:0007399 GO:0008134 GO:0008150 GO:0008152 GO:0008219 GO:0008380 GO:0008630 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009743 GO:0009791 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010228 GO:0010467 GO:0010468 GO:0010555 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0010638 GO:0010646 GO:0010647 GO:0010720 GO:0012501 GO:0016043 GO:0016070 GO:0016071 GO:0016363 GO:0017015 GO:0019219 GO:0019222 GO:0022008 GO:0022414 GO:0022607 GO:0022613 GO:0022618 GO:0023051 GO:0023052 GO:0023056 GO:0030154 GO:0030511 GO:0030522 GO:0031056 GO:0031058 GO:0031060 GO:0031062 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031399 GO:0031401 GO:0031974 GO:0031981 GO:0032101 GO:0032104 GO:0032107 GO:0032268 GO:0032270 GO:0032501 GO:0032502 GO:0032991 GO:0033043 GO:0033044 GO:0033120 GO:0033554 GO:0033993 GO:0034399 GO:0034622 GO:0034641 GO:0035257 GO:0035556 GO:0036002 GO:0042221 GO:0042752 GO:0042771 GO:0042809 GO:0042974 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043484 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045595 GO:0045597 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0045944 GO:0046332 GO:0046483 GO:0048024 GO:0048026 GO:0048384 GO:0048385 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048583 GO:0048584 GO:0048608 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050684 GO:0050685 GO:0050767 GO:0050769 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051173 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051252 GO:0051253 GO:0051254 GO:0051427 GO:0051569 GO:0051571 GO:0051716 GO:0051960 GO:0051962 GO:0060255 GO:0060284 GO:0061458 GO:0065003 GO:0065007 GO:0070013 GO:0070562 GO:0071007 GO:0071013 GO:0071014 GO:0071141 GO:0071704 GO:0071826 GO:0071840 GO:0072331 GO:0072332 GO:0080090 GO:0090092 GO:0090100 GO:0090287 GO:0090304 GO:0097159 GO:0097190 GO:0097193 GO:0097305 GO:0140110 GO:1901360 GO:1901363 GO:1901700 GO:1902275 GO:1902494 GO:1902679 GO:1902680 GO:1903311 GO:1903313 GO:1903506 GO:1903507 GO:1903508 GO:1903844 GO:1903846 GO:1905269 GO:1990904 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2001141 GO:2001252
KEGG Pathways
Metabolic & Signaling
ko03040 ko04330 ko05169 ko05203 map03040 map04330 map05169 map05203
Pfam Domains
Protein Families
SKIP_SNW

Protein Analysis

529

Amino Acids

59.46

Weight (kDa)

9.52

Isoelectric Point (pI)

46.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1358
AccB1I GGYRCC 1 cut(s) 371
AccI GTMKAC 3 cut(s) 120, 311, 575
AciI CCGC 7 cut(s) 356, 398, 470, 494, 866, 952, 1226
AclI AACGTT 1 cut(s) 1197
AclWI GGATC 4 cut(s) 144, 574, 955, 1415
AcoI YGGCCR 1 cut(s) 500
AcsI RAATTY 1 cut(s) 150
AcuI CTGAAG 2 cut(s) 542, 1431
AfaI GTAC 5 cut(s) 31, 335, 1193, 1247, 1280
AfiI CCNNNNNNNGG 6 cut(s) 381, 498, 1060, 1090, 1248, 1340
AflIII ACRYGT 1 cut(s) 336
AgeI ACCGGT 2 cut(s) 1384, 1437
AgsI TTSAA 9 cut(s) 157, 221, 436, 552, 623, 949, 1147, 1330, 1524
AhdI GACNNNNNGTC 1 cut(s) 16
AjnI CCWGG 2 cut(s) 59, 1149
AluBI AGCT 4 cut(s) 245, 661, 785, 1355
AluI AGCT 4 cut(s) 245, 661, 785, 1355
Alw21I GWGCWC 2 cut(s) 281, 1466
Alw26I GTCTC 3 cut(s) 896, 914, 1044
AlwI GGATC 4 cut(s) 144, 574, 955, 1415
AlwNI CAGNNNCTG 1 cut(s) 1141
AoxI GGCC 4 cut(s) 455, 500, 1250, 1517
ApeKI GCWGC 7 cut(s) 245, 353, 602, 815, 818, 1355, 1406
ApoI RAATTY 1 cut(s) 150
ArsI GACNNNNNNTTYG 2 cut(s) 1328, 1360
AsiGI ACCGGT 2 cut(s) 1384, 1437
AspLEI GCGC 1 cut(s) 250
AspS9I GGNCC 6 cut(s) 412, 465, 635, 1370, 1435, 1517
AsuC2I CCSGG 1 cut(s) 27
AsuHPI GGTGA 2 cut(s) 517, 1465
AsuII TTCGAA 1 cut(s) 1572
AvaII GGWCC 5 cut(s) 412, 465, 635, 1370, 1435
BanI GGYRCC 1 cut(s) 371
BanII GRGCYC 3 cut(s) 796, 1011, 1550
Bbv12I GWGCWC 2 cut(s) 281, 1466
BbvI GCAGC 7 cut(s) 232, 365, 614, 802, 830, 1342, 1393
BccI CCATC 5 cut(s) 169, 388, 835, 1094, 1526
BceAI ACGGC 1 cut(s) 515
BciT130I CCWGG 2 cut(s) 61, 1151
BcnI CCSGG 1 cut(s) 27
BcoDI GTCTC 3 cut(s) 896, 914, 1044
BfaI CTAG 2 cut(s) 462, 696
BfmI CTRYAG 1 cut(s) 816
BfuAI ACCTGC 1 cut(s) 1358
BglII AGATCT 1 cut(s) 625
BisI GCNGC 8 cut(s) 246, 354, 357, 603, 816, 819, 1356, 1407
BlsI GCNGC 8 cut(s) 247, 355, 358, 604, 817, 820, 1357, 1408
Bme1390I CCNGG 3 cut(s) 27, 61, 1151
Bme18I GGWCC 5 cut(s) 412, 465, 635, 1370, 1435
BmeRI GACNNNNNGTC 1 cut(s) 16
BmgT120I GGNCC 6 cut(s) 412, 465, 635, 1370, 1435, 1517
BmiI GGNNCC 5 cut(s) 373, 414, 467, 1008, 1549
BmrFI CCNGG 3 cut(s) 27, 61, 1151
BmsI GCATC 6 cut(s) 70, 172, 393, 853, 1006, 1393
BoxI GACNNNNGTC 1 cut(s) 594
BpmI CTGGAG 1 cut(s) 1534
Bpu14I TTCGAA 1 cut(s) 1572
BpuEI CTTGAG 3 cut(s) 272, 440, 793
BpuMI CCSGG 1 cut(s) 27
BsaI GGTCTC 1 cut(s) 1044
BsaJI CCNNGG 8 cut(s) 60, 375, 452, 497, 606, 1084, 1473, 1540
BsaWI WCCGGW 3 cut(s) 43, 1384, 1437
BsaXI ACNNNNNCTCC 6 cut(s) 722, 752, 986, 1016, 1107, 1137
Bsc4I CCNNNNNNNGG 6 cut(s) 381, 498, 1060, 1090, 1248, 1340
Bse118I RCCGGY 4 cut(s) 478, 502, 1384, 1437
Bse1I ACTGG 2 cut(s) 319, 1189
Bse3DI GCAATG 2 cut(s) 858, 1506
BseBI CCWGG 2 cut(s) 61, 1151
BseDI CCNNGG 8 cut(s) 60, 375, 452, 497, 606, 1084, 1473, 1540
BseGI GGATG 4 cut(s) 172, 184, 399, 1267
BseLI CCNNNNNNNGG 6 cut(s) 381, 498, 1060, 1090, 1248, 1340
BseMI GCAATG 2 cut(s) 858, 1506
BseMII CTCAG 2 cut(s) 800, 1350
BseNI ACTGG 2 cut(s) 319, 1189
BseRI GAGGAG 6 cut(s) 185, 212, 983, 1128, 1131, 1365
BseX3I CGGCCG 1 cut(s) 500
BseXI GCAGC 7 cut(s) 232, 365, 614, 802, 830, 1342, 1393
BsgI GTGCAG 2 cut(s) 267, 1533
Bsh1285I CGRYCG 3 cut(s) 503, 1385, 1389
BshFI GGCC 4 cut(s) 457, 502, 1252, 1519
BshNI GGYRCC 1 cut(s) 371
BshTI ACCGGT 2 cut(s) 1384, 1437
BsiEI CGRYCG 3 cut(s) 503, 1385, 1389
BsiHKAI GWGCWC 2 cut(s) 281, 1466
BsiSI CCGG 6 cut(s) 27, 44, 479, 503, 1385, 1438
BslFI GGGAC 2 cut(s) 23, 451
BslI CCNNNNNNNGG 6 cut(s) 381, 498, 1060, 1090, 1248, 1340
BsmAI GTCTC 3 cut(s) 896, 914, 1044
BsmBI CGTCTC 1 cut(s) 914
BsmFI GGGAC 2 cut(s) 23, 451
BsmI GAATGC 1 cut(s) 487
BsnI GGCC 4 cut(s) 457, 502, 1252, 1519
Bso31I GGTCTC 1 cut(s) 1044
Bsp119I TTCGAA 1 cut(s) 1572
Bsp1286I GDGCHC 5 cut(s) 281, 796, 1011, 1466, 1550
Bsp1407I TGTACA 1 cut(s) 1245
Bsp143I GATC 7 cut(s) 136, 579, 625, 960, 1057, 1321, 1420
BspACI CCGC 7 cut(s) 356, 398, 470, 494, 866, 952, 1226
BspANI GGCC 4 cut(s) 457, 502, 1252, 1519
BspCNI CTCAG 2 cut(s) 799, 1351
BspLI GGNNCC 5 cut(s) 373, 414, 467, 1008, 1549
BspMAI CTGCAG 1 cut(s) 820
BspMI ACCTGC 1 cut(s) 1358
BspPI GGATC 4 cut(s) 144, 574, 955, 1415
BspT104I TTCGAA 1 cut(s) 1572
BspT107I GGYRCC 1 cut(s) 371
BspTNI GGTCTC 1 cut(s) 1044
BsrDI GCAATG 2 cut(s) 858, 1506
BsrFI RCCGGY 4 cut(s) 478, 502, 1384, 1437
BsrGI TGTACA 1 cut(s) 1245
BsrI ACTGG 2 cut(s) 319, 1189
BssAI RCCGGY 4 cut(s) 478, 502, 1384, 1437
BssECI CCNNGG 8 cut(s) 60, 375, 452, 497, 606, 1084, 1473, 1540
BssMI GATC 7 cut(s) 136, 579, 625, 960, 1057, 1321, 1420
BssNAI GTATAC 1 cut(s) 576
BssT1I CCWWGG 3 cut(s) 375, 1473, 1540
Bst1107I GTATAC 1 cut(s) 576
Bst2UI CCWGG 2 cut(s) 61, 1151
Bst4CI ACNGT 2 cut(s) 52, 511
Bst6I CTCTTC 1 cut(s) 973
BstAUI TGTACA 1 cut(s) 1245
BstBI TTCGAA 1 cut(s) 1572
BstC8I GCNNGC 1 cut(s) 1108
BstDEI CTNAG 4 cut(s) 429, 786, 1254, 1359
BstDSI CCRYGG 1 cut(s) 497
BstENI CCTNNNNNAGG 2 cut(s) 1246, 1338
BstF5I GGATG 4 cut(s) 172, 184, 399, 1267
BstHHI GCGC 1 cut(s) 250
BstKTI GATC 7 cut(s) 139, 582, 628, 963, 1060, 1324, 1423
BstMAI GTCTC 3 cut(s) 896, 914, 1044
BstMBI GATC 7 cut(s) 136, 579, 625, 960, 1057, 1321, 1420
BstMCI CGRYCG 3 cut(s) 503, 1385, 1389
BstMWI GCNNNNNNNGC 7 cut(s) 484, 493, 791, 1364, 1415, 1505, 1525
BstNI CCWGG 2 cut(s) 61, 1151
BstNSI RCATGY 1 cut(s) 340
BstPAI GACNNNNGTC 1 cut(s) 594
BstSCI CCNGG 3 cut(s) 25, 59, 1149
BstSFI CTRYAG 1 cut(s) 816
BstV1I GCAGC 7 cut(s) 232, 365, 614, 802, 830, 1342, 1393
BstX2I RGATCY 3 cut(s) 136, 625, 960
BstYI RGATCY 3 cut(s) 136, 625, 960
BstZ17I GTATAC 1 cut(s) 576
BstZI CGGCCG 1 cut(s) 500
BsuRI GGCC 4 cut(s) 457, 502, 1252, 1519
BtgI CCRYGG 1 cut(s) 497
BtgZI GCGATG 1 cut(s) 327
BtsCI GGATG 4 cut(s) 172, 184, 399, 1267
BtsI GCAGTG 2 cut(s) 279, 1218
BtsIMutI CAGTG 4 cut(s) 279, 1075, 1179, 1218
BveI ACCTGC 1 cut(s) 1358
Cac8I GCNNGC 1 cut(s) 1108
CaiI CAGNNNCTG 1 cut(s) 1141
CfoI GCGC 1 cut(s) 250
Cfr10I RCCGGY 4 cut(s) 478, 502, 1384, 1437
Cfr13I GGNCC 6 cut(s) 412, 465, 635, 1370, 1435, 1517
CseI GACGC 1 cut(s) 872
Csp6I GTAC 5 cut(s) 30, 334, 1192, 1246, 1279
CspAI ACCGGT 2 cut(s) 1384, 1437
CviAII CATG 4 cut(s) 337, 484, 712, 1090
CviQI GTAC 5 cut(s) 30, 334, 1192, 1246, 1279
DdeI CTNAG 4 cut(s) 429, 786, 1254, 1359
DpnI GATC 7 cut(s) 138, 581, 627, 962, 1059, 1323, 1422
DpnII GATC 7 cut(s) 136, 579, 625, 960, 1057, 1321, 1420
DriI GACNNNNNGTC 1 cut(s) 16
EaeI YGGCCR 1 cut(s) 500
EagI CGGCCG 1 cut(s) 500
Eam1104I CTCTTC 1 cut(s) 973
Eam1105I GACNNNNNGTC 1 cut(s) 16
EarI CTCTTC 1 cut(s) 973
EciI GGCGGA 2 cut(s) 413, 1215
EclXI CGGCCG 1 cut(s) 500
Eco130I CCWWGG 3 cut(s) 375, 1473, 1540
Eco147I AGGCCT 2 cut(s) 457, 1252
Eco24I GRGCYC 3 cut(s) 796, 1011, 1550
Eco31I GGTCTC 1 cut(s) 1044
Eco32I GATATC 1 cut(s) 1066
Eco47I GGWCC 5 cut(s) 412, 465, 635, 1370, 1435
Eco52I CGGCCG 1 cut(s) 500
Eco57I CTGAAG 2 cut(s) 542, 1431
EcoNI CCTNNNNNAGG 2 cut(s) 1246, 1338
EcoO109I RGGNCCY 2 cut(s) 465, 1517
EcoRII CCWGG 2 cut(s) 59, 1149
EcoRV GATATC 1 cut(s) 1066
EcoT14I CCWWGG 3 cut(s) 375, 1473, 1540
EcoT22I ATGCAT 1 cut(s) 489
EcoT38I GRGCYC 3 cut(s) 796, 1011, 1550
ErhI CCWWGG 3 cut(s) 375, 1473, 1540
Esp3I CGTCTC 1 cut(s) 914
FaeI CATG 4 cut(s) 340, 487, 715, 1093
FalI AAGNNNNNCTT 2 cut(s) 234, 266
FaqI GGGAC 2 cut(s) 23, 451
FatI CATG 4 cut(s) 336, 483, 711, 1089
FauI CCCGC 4 cut(s) 477, 501, 859, 945
FblI GTMKAC 3 cut(s) 120, 311, 575
Fnu4HI GCNGC 8 cut(s) 246, 354, 357, 603, 816, 819, 1356, 1407
FokI GGATG 4 cut(s) 179, 191, 406, 1274
FriOI GRGCYC 3 cut(s) 796, 1011, 1550
Fsp4HI GCNGC 8 cut(s) 246, 354, 357, 603, 816, 819, 1356, 1407
FspBI CTAG 2 cut(s) 462, 696
GlaI GCGC 1 cut(s) 249
GluI GCNGC 8 cut(s) 246, 354, 357, 603, 816, 819, 1356, 1407
GsuI CTGGAG 1 cut(s) 1534
HaeIII GGCC 4 cut(s) 457, 502, 1252, 1519
HapII CCGG 6 cut(s) 27, 44, 479, 503, 1385, 1438
HgaI GACGC 1 cut(s) 872
HhaI GCGC 1 cut(s) 250
Hin1II CATG 4 cut(s) 340, 487, 715, 1093
Hin6I GCGC 1 cut(s) 248
HinP1I GCGC 1 cut(s) 248
HincII GTYRAC 2 cut(s) 312, 741
HindII GTYRAC 2 cut(s) 312, 741
HindIII AAGCTT 1 cut(s) 659
HinfI GANTC 3 cut(s) 535, 1166, 1569
HpaII CCGG 6 cut(s) 27, 44, 479, 503, 1385, 1438
HphI GGTGA 2 cut(s) 517, 1465
Hpy166II GTNNAC 6 cut(s) 121, 312, 412, 576, 741, 1218
Hpy188I TCNGA 5 cut(s) 453, 789, 802, 915, 1099
Hpy188III TCNNGA 7 cut(s) 391, 623, 644, 728, 1061, 1433, 1444
Hpy8I GTNNAC 6 cut(s) 121, 312, 412, 576, 741, 1218
Hpy99I CGWCG 1 cut(s) 978
HpyCH4III ACNGT 2 cut(s) 52, 511
HpyCH4IV ACGT 2 cut(s) 595, 1197
HpyCH4V TGCA 8 cut(s) 208, 284, 487, 602, 818, 1019, 1106, 1514
HpyF10VI GCNNNNNNNGC 7 cut(s) 484, 493, 791, 1364, 1415, 1505, 1525
HpyF3I CTNAG 4 cut(s) 429, 786, 1254, 1359
HpySE526I ACGT 2 cut(s) 595, 1197
Hsp92II CATG 4 cut(s) 340, 487, 715, 1093
HspAI GCGC 1 cut(s) 248
Kzo9I GATC 7 cut(s) 136, 579, 625, 960, 1057, 1321, 1420
LmnI GCTCC 6 cut(s) 763, 970, 1006, 1228, 1352, 1553
Lsp1109I GCAGC 7 cut(s) 232, 365, 614, 802, 830, 1342, 1393
LweI GCATC 6 cut(s) 70, 172, 393, 853, 1006, 1393
MaeI CTAG 2 cut(s) 462, 696
MaeII ACGT 2 cut(s) 595, 1197
MaeIII GTNAC 2 cut(s) 46, 505
MalI GATC 7 cut(s) 138, 581, 627, 962, 1059, 1323, 1422
MboI GATC 7 cut(s) 136, 579, 625, 960, 1057, 1321, 1420
MboII GAAGA 9 cut(s) 169, 233, 268, 544, 571, 970, 990, 1042, 1424
MflI RGATCY 3 cut(s) 136, 625, 960
MhlI GDGCHC 5 cut(s) 281, 796, 1011, 1466, 1550
MluCI AATT 7 cut(s) 150, 324, 364, 553, 649, 705, 1041
MmeI TCCRAC 4 cut(s) 911, 984, 1281, 1465
Mph1103I ATGCAT 1 cut(s) 489
MseI TTAA 5 cut(s) 54, 90, 363, 663, 1311
MslI CAYNNNNRTG 1 cut(s) 444
MspA1I CMGCKG 1 cut(s) 356
MspI CCGG 6 cut(s) 27, 44, 479, 503, 1385, 1438
MspR9I CCNGG 3 cut(s) 27, 61, 1151
Mva1269I GAATGC 1 cut(s) 487
MvaI CCWGG 2 cut(s) 61, 1151
MwoI GCNNNNNNNGC 7 cut(s) 484, 493, 791, 1364, 1415, 1505, 1525
NciI CCSGG 1 cut(s) 27
NdeII GATC 7 cut(s) 136, 579, 625, 960, 1057, 1321, 1420
NlaIII CATG 4 cut(s) 340, 487, 715, 1093
NlaIV GGNNCC 5 cut(s) 373, 414, 467, 1008, 1549
NmeAIII GCCGAG 2 cut(s) 631, 1065
NmuCI GTSAC 1 cut(s) 505
NsiI ATGCAT 1 cut(s) 489
NspI RCATGY 1 cut(s) 340
NspV TTCGAA 1 cut(s) 1572
PceI AGGCCT 2 cut(s) 457, 1252
PciI ACATGT 1 cut(s) 336
PcsI WCGNNNNNNNCGW 1 cut(s) 317
PctI GAATGC 1 cut(s) 487
PfeI GAWTC 3 cut(s) 535, 1166, 1569
PinAI ACCGGT 2 cut(s) 1384, 1437
PkrI GCNGC 8 cut(s) 247, 355, 358, 604, 817, 820, 1357, 1408
PpuMI RGGWCCY 1 cut(s) 465
PscI ACATGT 1 cut(s) 336
PshAI GACNNNNGTC 1 cut(s) 594
Psp1406I AACGTT 1 cut(s) 1197
Psp5II RGGWCCY 1 cut(s) 465
Psp6I CCWGG 2 cut(s) 59, 1149
PspGI CCWGG 2 cut(s) 59, 1149
PspN4I GGNNCC 5 cut(s) 373, 414, 467, 1008, 1549
PspPI GGNCC 6 cut(s) 412, 465, 635, 1370, 1435, 1517
PspPPI RGGWCCY 1 cut(s) 465
PstI CTGCAG 1 cut(s) 820
PstNI CAGNNNCTG 1 cut(s) 1141
PsuI RGATCY 3 cut(s) 136, 625, 960
RsaI GTAC 5 cut(s) 31, 335, 1193, 1247, 1280
RsaNI GTAC 5 cut(s) 30, 334, 1192, 1246, 1279
RseI CAYNNNNRTG 1 cut(s) 444
SalI GTCGAC 1 cut(s) 310
SaqAI TTAA 5 cut(s) 54, 90, 363, 663, 1311
SatI GCNGC 8 cut(s) 246, 354, 357, 603, 816, 819, 1356, 1407
Sau3AI GATC 7 cut(s) 136, 579, 625, 960, 1057, 1321, 1420
Sau96I GGNCC 6 cut(s) 412, 465, 635, 1370, 1435, 1517
ScrFI CCNGG 3 cut(s) 27, 61, 1151
SduI GDGCHC 5 cut(s) 281, 796, 1011, 1466, 1550
SfaNI GCATC 6 cut(s) 70, 172, 393, 853, 1006, 1393
SfcI CTRYAG 1 cut(s) 816
SfuI TTCGAA 1 cut(s) 1572
SinI GGWCC 5 cut(s) 412, 465, 635, 1370, 1435
SmiMI CAYNNNNRTG 1 cut(s) 444
SmlI CTYRAG 3 cut(s) 251, 419, 772
SmoI CTYRAG 3 cut(s) 251, 419, 772
Sse9I AATT 7 cut(s) 150, 324, 364, 553, 649, 705, 1041
SseBI AGGCCT 2 cut(s) 457, 1252
SsiI CCGC 7 cut(s) 356, 398, 470, 494, 866, 952, 1226
SspMI CTAG 2 cut(s) 462, 696
StuI AGGCCT 2 cut(s) 457, 1252
StyD4I CCNGG 3 cut(s) 25, 59, 1149
StyI CCWWGG 3 cut(s) 375, 1473, 1540
TaaI ACNGT 2 cut(s) 52, 511
TaiI ACGT 2 cut(s) 598, 1200
TaqI TCGA 5 cut(s) 107, 311, 320, 1389, 1572
TaqII GACCGA 1 cut(s) 1068
TasI AATT 7 cut(s) 150, 324, 364, 553, 649, 705, 1041
TatI WGTACW 3 cut(s) 333, 1191, 1245
TauI GCSGC 1 cut(s) 359
TfiI GAWTC 3 cut(s) 535, 1166, 1569
Tru1I TTAA 5 cut(s) 54, 90, 363, 663, 1311
Tru9I TTAA 5 cut(s) 54, 90, 363, 663, 1311
TscAI CASTG 4 cut(s) 286, 1075, 1186, 1225
TseFI GTSAC 1 cut(s) 505
TseI GCWGC 7 cut(s) 245, 353, 602, 815, 818, 1355, 1406
Tsp45I GTSAC 1 cut(s) 505
TspDTI ATGAA 1 cut(s) 1287
TspGWI ACGGA 3 cut(s) 627, 953, 1296
TspRI CASTG 4 cut(s) 286, 1075, 1186, 1225
VpaK11BI GGWCC 5 cut(s) 412, 465, 635, 1370, 1435
XagI CCTNNNNNAGG 2 cut(s) 1246, 1338
XapI RAATTY 1 cut(s) 150
XceI RCATGY 1 cut(s) 340
XmiI GTMKAC 3 cut(s) 120, 311, 575
XspI CTAG 2 cut(s) 462, 696
Zsp2I ATGCAT 1 cut(s) 489
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.