Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Forward (+)

21266573 .. 21269051

Gene Structure 2479 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G251700.1_v2.0.a1.CDS.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1056 bp

ATGGCTGGCTTTCTTCTTCCTGCTGAGGCAGCATCATCGTCATCAGTCCCCAATGAGCCCCAACAAATGCTAATTGAAGAGCCCCCACCATCACAATTCATTGTGAAAGAAAGAGCTTTTGGCCCTGTGGAGTCTTCTCCTCCATTAGTTCAGATTCCCATCGTTGATGTCAGTCTGGTCTTCAGCTCACAAGATGAACTGGAGAAGCTAAAGAACGCTCTCAGCTCATGGGGATGCTTCCAGGCAATTGGACATGGGATTTCAAGCTCATTCCTAGATAAGGTGCGCGAAGCAGCAAAACACTTCTTCTCACTTCCAATGGAAGAGAAGCACAAGTGCTTTCGAGCAGTGAAGGAAGCTGAAGGATATGGGAGTGACTTGATAGTTTCCGATAAGCAAATTCTCGACTGGTCCAATCGCCTCTTTCTAATGGTATTTCCGGAAAATCAAAGAAGGCTCAATCTTTGGCCAGAAATGCCAAATGATTTTGGAGAGATCTTGATTGAATATGCTACAAAGATAAGGTCTTTAATGGATCTCTGCTTTAAGGCCATGGCAAAGTCACTGCAACTGGAAGAGGACATCTTCCTGAAGCATTTTGGAGACCAAGCTGTGGTGCAAGCAAGATATAACTTCTACCCACCTTGTCCTAGATCAGATTTGGTTCTTGGCCTCAAATCTCATTCAGATAAATCAGGGGTCACTATCCTCTTGCAGGATCAACAAGTTGAAGGCCTTCAGCTTTTCAAAGATGGTACATGGTTCAGAGTTCCTATAGTACCCCAGGCTCTTATTGTCAATCTAGGTGATCAAATGGAGATAATGAGTAATGGAATATTCAAGAGCCCACTGCACAGAGTCACAACAAACACAGAAAGGATGAGGGCATCTGTGGCCATGCTTATTGAGCCAGCAGCTGAACAAGAGATTGGTCCAGTGGATGACTTGGTGGATGAGAAAAGACCAAGACTCTATCAGAATGTGAAGAATTATGGTGCTTTTAACTATCATTGTTATCAGAAAGGGTTGGTAGCTCTTGATGCAGTGAAAATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0007275 GO:0007568 GO:0008150 GO:0008152 GO:0010150 GO:0016491 GO:0016679 GO:0016682 GO:0032501 GO:0032502 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0055114 GO:0090693 GO:0099402

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

2OG-FeII_Oxy DIOX_N

Protein Analysis

352

Amino Acids

39.61

Weight (kDa)

5.4

Isoelectric Point (pI)

47.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	613
AccII	CGCG	1 cut(s)	288
AccIII	TCCGGA	1 cut(s)	439
AclWI	GGATC	2 cut(s)	543, 726
AcoI	YGGCCR	2 cut(s)	467, 894
AcsI	RAATTY	1 cut(s)	399
AcuI	CTGAAG	4 cut(s)	166, 381, 611, 722
AfaI	GTAC	2 cut(s)	757, 780
AfiI	CCNNNNNNNGG	3 cut(s)	280, 613, 715
AgsI	TTSAA	6 cut(s)	77, 264, 506, 731, 748, 841
AjnI	CCWGG	2 cut(s)	240, 783
AjuI	GAANNNNNNNTTGG	4 cut(s)	102, 134, 912, 944
Alw26I	GTCTC	1 cut(s)	597
AlwI	GGATC	2 cut(s)	543, 726
AlwNI	CAGNNNCTG	1 cut(s)	917
Aor13HI	TCCGGA	1 cut(s)	439
AoxI	GGCC	6 cut(s)	121, 467, 549, 670, 733, 894
ApeKI	GCWGC	3 cut(s)	29, 293, 914
ApoI	RAATTY	1 cut(s)	399
ArsI	GACNNNNNNTTYG	2 cut(s)	509, 541
Asp700I	GAANNNNTTC	1 cut(s)	735
AspLEI	GCGC	1 cut(s)	288
AspS9I	GGNCC	3 cut(s)	122, 411, 932
AsuHPI	GGTGA	1 cut(s)	818
AvaII	GGWCC	2 cut(s)	411, 932
BalI	TGGCCA	2 cut(s)	469, 896
BanII	GRGCYC	3 cut(s)	60, 84, 848
BbsI	GAAGAC	2 cut(s)	126, 172
BbvCI	CCTCAGC	1 cut(s)	24
BbvI	GCAGC	3 cut(s)	41, 305, 926
BccI	CCATC	3 cut(s)	97, 167, 746
BcgI	CGANNNNNNTGC	2 cut(s)	18, 52
BciT130I	CCWGG	2 cut(s)	242, 785
BclI	TGATCA	1 cut(s)	808
BcoDI	GTCTC	1 cut(s)	597
BfaI	CTAG	3 cut(s)	275, 651, 803
BfmI	CTRYAG	1 cut(s)	774
BglII	AGATCT	1 cut(s)	495
BisI	GCNGC	3 cut(s)	30, 294, 915
BlsI	GCNGC	3 cut(s)	31, 295, 916
Bme1390I	CCNGG	2 cut(s)	242, 785
Bme18I	GGWCC	2 cut(s)	411, 932
BmgT120I	GGNCC	3 cut(s)	122, 411, 932
BmrFI	CCNGG	2 cut(s)	242, 785
BmsI	GCATC	4 cut(s)	41, 224, 896, 1030
BpiI	GAAGAC	2 cut(s)	126, 172
BpmI	CTGGAG	1 cut(s)	221
Bpu10I	CCTNAGC	1 cut(s)	24
BsaBI	GATNNNNATC	1 cut(s)	158
BsaI	GGTCTC	1 cut(s)	597
BsaJI	CCNNGG	2 cut(s)	552, 783
BsaWI	WCCGGW	1 cut(s)	439
Bsc4I	CCNNNNNNNGG	3 cut(s)	280, 613, 715
Bse1I	ACTGG	4 cut(s)	204, 413, 576, 935
Bse8I	GATNNNNATC	1 cut(s)	158
BseAI	TCCGGA	1 cut(s)	439
BseBI	CCWGG	2 cut(s)	242, 785
BseDI	CCNNGG	2 cut(s)	552, 783
BseGI	GGATG	4 cut(s)	239, 885, 946, 958
BseJI	GATNNNNATC	1 cut(s)	158
BseLI	CCNNNNNNNGG	3 cut(s)	280, 613, 715
BseMII	CTCAG	2 cut(s)	15, 235
BseNI	ACTGG	4 cut(s)	204, 413, 576, 935
BseRI	GAGGAG	1 cut(s)	129
BseXI	GCAGC	3 cut(s)	41, 305, 926
BsgI	GTGCAG	1 cut(s)	836
Bsh1236I	CGCG	1 cut(s)	288
BshFI	GGCC	6 cut(s)	123, 469, 551, 672, 735, 896
BsiSI	CCGG	1 cut(s)	440
BslFI	GGGAC	1 cut(s)	32
BslI	CCNNNNNNNGG	3 cut(s)	280, 613, 715
BsmAI	GTCTC	1 cut(s)	597
BsmFI	GGGAC	1 cut(s)	32
BsnI	GGCC	6 cut(s)	123, 469, 551, 672, 735, 896
Bso31I	GGTCTC	1 cut(s)	597
Bsp1286I	GDGCHC	3 cut(s)	60, 84, 848
Bsp13I	TCCGGA	1 cut(s)	439
Bsp143I	GATC	5 cut(s)	495, 535, 653, 718, 808
Bsp19I	CCATGG	1 cut(s)	552
BspANI	GGCC	6 cut(s)	123, 469, 551, 672, 735, 896
BspCNI	CTCAG	2 cut(s)	16, 234
BspEI	TCCGGA	1 cut(s)	439
BspFNI	CGCG	1 cut(s)	288
BspPI	GGATC	2 cut(s)	543, 726
BspQI	GCTCTTC	1 cut(s)	72
BspTNI	GGTCTC	1 cut(s)	597
BsrI	ACTGG	4 cut(s)	204, 413, 576, 935
BssECI	CCNNGG	2 cut(s)	552, 783
BssMI	GATC	5 cut(s)	495, 535, 653, 718, 808
BssT1I	CCWWGG	1 cut(s)	552
Bst2UI	CCWGG	2 cut(s)	242, 785
Bst6I	CTCTTC	3 cut(s)	72, 318, 570
BstC8I	GCNNGC	3 cut(s)	7, 621, 912
BstDEI	CTNAG	2 cut(s)	24, 221
BstDSI	CCRYGG	1 cut(s)	552
BstENI	CCTNNNNNAGG	2 cut(s)	278, 713
BstF5I	GGATG	4 cut(s)	239, 885, 946, 958
BstFNI	CGCG	1 cut(s)	288
BstHHI	GCGC	1 cut(s)	288
BstKTI	GATC	5 cut(s)	498, 538, 656, 721, 811
BstMAI	GTCTC	1 cut(s)	597
BstMBI	GATC	5 cut(s)	495, 535, 653, 718, 808
BstMWI	GCNNNNNNNGC	5 cut(s)	29, 475, 893, 907, 1040
BstNI	CCWGG	2 cut(s)	242, 785
BstSCI	CCNGG	2 cut(s)	240, 783
BstSFI	CTRYAG	1 cut(s)	774
BstUI	CGCG	1 cut(s)	288
BstV1I	GCAGC	3 cut(s)	41, 305, 926
BstV2I	GAAGAC	2 cut(s)	126, 172
BstX2I	RGATCY	2 cut(s)	495, 535
BstXI	CCANNNNNNTGG	1 cut(s)	248
BstYI	RGATCY	2 cut(s)	495, 535
BsuRI	GGCC	6 cut(s)	123, 469, 551, 672, 735, 896
BtgI	CCRYGG	1 cut(s)	552
BtsCI	GGATG	4 cut(s)	239, 885, 946, 958
BtsI	GCAGTG	4 cut(s)	354, 563, 848, 1050
BtsIMutI	CAGTG	5 cut(s)	354, 563, 848, 942, 1050
Cac8I	GCNNGC	3 cut(s)	7, 621, 912
CaiI	CAGNNNCTG	1 cut(s)	917
CfoI	GCGC	1 cut(s)	288
Cfr13I	GGNCC	3 cut(s)	122, 411, 932
Csp6I	GTAC	2 cut(s)	756, 779
CviAII	CATG	5 cut(s)	228, 254, 553, 759, 898
CviQI	GTAC	2 cut(s)	756, 779
DdeI	CTNAG	2 cut(s)	24, 221
DpnI	GATC	5 cut(s)	497, 537, 655, 720, 810
DpnII	GATC	5 cut(s)	495, 535, 653, 718, 808
EaeI	YGGCCR	2 cut(s)	467, 894
Eam1104I	CTCTTC	3 cut(s)	72, 318, 570
EarI	CTCTTC	3 cut(s)	72, 318, 570
Eco130I	CCWWGG	1 cut(s)	552
Eco147I	AGGCCT	1 cut(s)	735
Eco24I	GRGCYC	3 cut(s)	60, 84, 848
Eco31I	GGTCTC	1 cut(s)	597
Eco47I	GGWCC	2 cut(s)	411, 932
Eco57I	CTGAAG	4 cut(s)	166, 381, 611, 722
EcoNI	CCTNNNNNAGG	2 cut(s)	278, 713
EcoRII	CCWGG	2 cut(s)	240, 783
EcoT14I	CCWWGG	1 cut(s)	552
EcoT38I	GRGCYC	3 cut(s)	60, 84, 848
ErhI	CCWWGG	1 cut(s)	552
FaeI	CATG	5 cut(s)	231, 257, 556, 762, 901
FaqI	GGGAC	1 cut(s)	32
FatI	CATG	5 cut(s)	227, 253, 552, 758, 897
FbaI	TGATCA	1 cut(s)	808
Fnu4HI	GCNGC	3 cut(s)	30, 294, 915
FokI	GGATG	4 cut(s)	246, 892, 953, 965
FriOI	GRGCYC	3 cut(s)	60, 84, 848
Fsp4HI	GCNGC	3 cut(s)	30, 294, 915
FspBI	CTAG	3 cut(s)	275, 651, 803
GlaI	GCGC	1 cut(s)	287
GluI	GCNGC	3 cut(s)	30, 294, 915
GsuI	CTGGAG	1 cut(s)	221
HaeIII	GGCC	6 cut(s)	123, 469, 551, 672, 735, 896
HapII	CCGG	1 cut(s)	440
HhaI	GCGC	1 cut(s)	288
Hin1II	CATG	5 cut(s)	231, 257, 556, 762, 901
Hin6I	GCGC	1 cut(s)	286
HinP1I	GCGC	1 cut(s)	286
HinfI	GANTC	4 cut(s)	131, 154, 858, 969
HpaII	CCGG	1 cut(s)	440
HphI	GGTGA	1 cut(s)	818
Hpy188I	TCNGA	7 cut(s)	153, 391, 658, 688, 767, 978, 1020
Hpy188III	TCNNGA	6 cut(s)	404, 440, 499, 589, 841, 1037
HpyAV	CCTTC	5 cut(s)	346, 356, 447, 725, 746
HpyCH4V	TGCA	5 cut(s)	568, 619, 715, 853, 1043
HpyF10VI	GCNNNNNNNGC	5 cut(s)	29, 475, 893, 907, 1040
HpyF3I	CTNAG	2 cut(s)	24, 221
Hsp92II	CATG	5 cut(s)	231, 257, 556, 762, 901
HspAI	GCGC	1 cut(s)	286
Kpn2I	TCCGGA	1 cut(s)	439
Ksp22I	TGATCA	1 cut(s)	808
Kzo9I	GATC	5 cut(s)	495, 535, 653, 718, 808
LguI	GCTCTTC	1 cut(s)	72
Lsp1109I	GCAGC	3 cut(s)	41, 305, 926
LweI	GCATC	4 cut(s)	41, 224, 896, 1030
MaeI	CTAG	3 cut(s)	275, 651, 803
MaeIII	GTNAC	4 cut(s)	374, 561, 700, 859
MalI	GATC	5 cut(s)	497, 537, 655, 720, 810
MboI	GATC	5 cut(s)	495, 535, 653, 718, 808
MfeI	CAATTG	1 cut(s)	246
MflI	RGATCY	2 cut(s)	495, 535
MhlI	GDGCHC	3 cut(s)	60, 84, 848
MlsI	TGGCCA	2 cut(s)	469, 896
MluCI	AATT	5 cut(s)	72, 95, 246, 399, 988
MluNI	TGGCCA	2 cut(s)	469, 896
MlyI	GAGTC	3 cut(s)	140, 867, 963
MnlI	CCTC	7 cut(s)	19, 150, 431, 571, 683, 719, 876
Mox20I	TGGCCA	2 cut(s)	469, 896
MroI	TCCGGA	1 cut(s)	439
MroXI	GAANNNNTTC	1 cut(s)	735
MscI	TGGCCA	2 cut(s)	469, 896
MseI	TTAA	3 cut(s)	530, 546, 1002
MslI	CAYNNNNRTG	1 cut(s)	232
Msp20I	TGGCCA	2 cut(s)	469, 896
MspA1I	CMGCKG	1 cut(s)	917
MspI	CCGG	1 cut(s)	440
MspR9I	CCNGG	2 cut(s)	242, 785
MunI	CAATTG	1 cut(s)	246
MvaI	CCWGG	2 cut(s)	242, 785
MvnI	CGCG	1 cut(s)	288
MwoI	GCNNNNNNNGC	5 cut(s)	29, 475, 893, 907, 1040
NcoI	CCATGG	1 cut(s)	552
NdeII	GATC	5 cut(s)	495, 535, 653, 718, 808
NlaIII	CATG	5 cut(s)	231, 257, 556, 762, 901
NmuCI	GTSAC	4 cut(s)	374, 561, 700, 859
PceI	AGGCCT	1 cut(s)	735
PciSI	GCTCTTC	1 cut(s)	72
PdmI	GAANNNNTTC	1 cut(s)	735
PfeI	GAWTC	1 cut(s)	154
PflMI	CCANNNNNTGG	1 cut(s)	613
PkrI	GCNGC	3 cut(s)	31, 295, 916
PleI	GAGTC	3 cut(s)	139, 866, 963
PpsI	GAGTC	3 cut(s)	139, 866, 963
Psp6I	CCWGG	2 cut(s)	240, 783
PspGI	CCWGG	2 cut(s)	240, 783
PspPI	GGNCC	3 cut(s)	122, 411, 932
PstNI	CAGNNNCTG	1 cut(s)	917
PsuI	RGATCY	2 cut(s)	495, 535
PvuII	CAGCTG	1 cut(s)	917
RsaI	GTAC	2 cut(s)	757, 780
RsaNI	GTAC	2 cut(s)	756, 779
RseI	CAYNNNNRTG	1 cut(s)	232
SapI	GCTCTTC	1 cut(s)	72
SaqAI	TTAA	3 cut(s)	530, 546, 1002
SatI	GCNGC	3 cut(s)	30, 294, 915
Sau3AI	GATC	5 cut(s)	495, 535, 653, 718, 808
Sau96I	GGNCC	3 cut(s)	122, 411, 932
SchI	GAGTC	3 cut(s)	140, 867, 963
ScrFI	CCNGG	2 cut(s)	242, 785
SduI	GDGCHC	3 cut(s)	60, 84, 848
SfaNI	GCATC	4 cut(s)	41, 224, 896, 1030
SfcI	CTRYAG	1 cut(s)	774
SinI	GGWCC	2 cut(s)	411, 932
SmiMI	CAYNNNNRTG	1 cut(s)	232
Sse9I	AATT	5 cut(s)	72, 95, 246, 399, 988
SseBI	AGGCCT	1 cut(s)	735
SspI	AATATT	1 cut(s)	837
SspMI	CTAG	3 cut(s)	275, 651, 803
StuI	AGGCCT	1 cut(s)	735
StyD4I	CCNGG	2 cut(s)	240, 783
StyI	CCWWGG	1 cut(s)	552
TaqI	TCGA	2 cut(s)	343, 405
TasI	AATT	5 cut(s)	72, 95, 246, 399, 988
TfiI	GAWTC	1 cut(s)	154
Tru1I	TTAA	3 cut(s)	530, 546, 1002
Tru9I	TTAA	3 cut(s)	530, 546, 1002
TscAI	CASTG	5 cut(s)	354, 570, 855, 942, 1050
TseFI	GTSAC	4 cut(s)	374, 561, 700, 859
TseI	GCWGC	3 cut(s)	29, 293, 914
Tsp45I	GTSAC	4 cut(s)	374, 561, 700, 859
TspDTI	ATGAA	2 cut(s)	88, 210
TspRI	CASTG	5 cut(s)	354, 570, 855, 942, 1050
Van91I	CCANNNNNTGG	1 cut(s)	613
VpaK11BI	GGWCC	2 cut(s)	411, 932
XagI	CCTNNNNNAGG	2 cut(s)	278, 713
XapI	RAATTY	1 cut(s)	399
XmnI	GAANNNNTTC	1 cut(s)	735
XspI	CTAG	3 cut(s)	275, 651, 803

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.