pycom01g02550
HSP70 Family

Heat shock cognate 70 kDa

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
N/A
Physical Location & Seq
Forward (+)
2064993 .. 2065571
579 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g02550.3

Sequence Viewer

Length: 366 bp
ATGGTTTTTGGGCAAGTGGTGATCGGCCTGCCTGAGTTAGGAAAGACCACTTATTGCAATGGCATGTCTGAGTTCCTCCAGCTCATCGGAAGGAAGGTCGTTGTGGTAAATTTGGATCATTCCACCGATGCATTGCTGTATCCAATGTCGTATGTTGAGGTTCAAAGCCGATTTGGGGACTTTGAAATGGTGGATGCCGGGCCAGTTACACTACTTCAGGTACTTCAATTCCAATGCCAAGATTGTGCATTTCTTTTGCGTAATTTTTATCTTCTGCTGATTTCGATTGAATTCCAAGAAATTTTTTATTTGCTTAGTTTAATTTGTAGTTGTCTAATTGTTATGAAGATCTGTGAATGTGTGTGA
Functional Annotation

Protein Analysis

122

Amino Acids

13.73

Weight (kDa)

4.45

Isoelectric Point (pI)

49.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 123
AcsI RAATTY 3 cut(s) 109, 290, 300
AcuI CTGAAG 1 cut(s) 200
AfaI GTAC 1 cut(s) 222
AfiI CCNNNNNNNGG 2 cut(s) 38, 175
AgsI TTSAA 4 cut(s) 164, 185, 227, 290
AluBI AGCT 1 cut(s) 82
AluI AGCT 1 cut(s) 82
AlwI GGATC 1 cut(s) 123
AoxI GGCC 2 cut(s) 25, 200
ApoI RAATTY 3 cut(s) 109, 290, 300
AspS9I GGNCC 1 cut(s) 200
AsuC2I CCSGG 1 cut(s) 199
AsuHPI GGTGA 1 cut(s) 31
BciVI GTATCC 1 cut(s) 150
BcnI CCSGG 1 cut(s) 199
BfuI GTATCC 1 cut(s) 150
BglII AGATCT 1 cut(s) 348
Bme1390I CCNGG 1 cut(s) 199
BmgT120I GGNCC 1 cut(s) 200
BmrFI CCNGG 1 cut(s) 199
BmsI GCATC 2 cut(s) 118, 184
BpmI CTGGAG 1 cut(s) 62
BpuMI CCSGG 1 cut(s) 199
Bsc4I CCNNNNNNNGG 2 cut(s) 38, 175
Bse1I ACTGG 1 cut(s) 203
Bse3DI GCAATG 2 cut(s) 64, 131
BseGI GGATG 1 cut(s) 199
BseLI CCNNNNNNNGG 2 cut(s) 38, 175
BseMI GCAATG 2 cut(s) 64, 131
BseMII CTCAG 2 cut(s) 24, 60
BseNI ACTGG 1 cut(s) 203
BshFI GGCC 2 cut(s) 27, 202
BsiSI CCGG 1 cut(s) 198
BslFI GGGAC 1 cut(s) 191
BslI CCNNNNNNNGG 2 cut(s) 38, 175
BsmFI GGGAC 1 cut(s) 191
BsnI GGCC 2 cut(s) 27, 202
Bsp143I GATC 3 cut(s) 21, 115, 348
BspANI GGCC 2 cut(s) 27, 202
BspCNI CTCAG 2 cut(s) 25, 61
BspPI GGATC 1 cut(s) 123
BsrDI GCAATG 2 cut(s) 64, 131
BsrI ACTGG 1 cut(s) 203
BssMI GATC 3 cut(s) 21, 115, 348
BstC8I GCNNGC 1 cut(s) 29
BstDEI CTNAG 3 cut(s) 33, 69, 314
BstENI CCTNNNNNAGG 1 cut(s) 36
BstF5I GGATG 1 cut(s) 199
BstKTI GATC 3 cut(s) 24, 118, 351
BstMBI GATC 3 cut(s) 21, 115, 348
BstNSI RCATGY 1 cut(s) 67
BstSCI CCNGG 1 cut(s) 197
BstX2I RGATCY 1 cut(s) 348
BstYI RGATCY 1 cut(s) 348
BsuI GTATCC 1 cut(s) 150
BsuRI GGCC 2 cut(s) 27, 202
BtsCI GGATG 1 cut(s) 199
Cac8I GCNNGC 1 cut(s) 29
Cfr13I GGNCC 1 cut(s) 200
Csp6I GTAC 1 cut(s) 221
CviAII CATG 1 cut(s) 64
CviJI RGCY 4 cut(s) 27, 82, 168, 202
CviKI_1 RGCY 4 cut(s) 27, 82, 168, 202
CviQI GTAC 1 cut(s) 221
DdeI CTNAG 3 cut(s) 33, 69, 314
DpnI GATC 3 cut(s) 23, 117, 350
DpnII GATC 3 cut(s) 21, 115, 348
Eco57I CTGAAG 1 cut(s) 200
EcoNI CCTNNNNNAGG 1 cut(s) 36
EcoRI GAATTC 1 cut(s) 290
EcoT22I ATGCAT 1 cut(s) 133
FaeI CATG 1 cut(s) 67
FaiI YATR 3 cut(s) 65, 153, 344
FaqI GGGAC 1 cut(s) 191
FatI CATG 1 cut(s) 63
FokI GGATG 1 cut(s) 206
GsuI CTGGAG 1 cut(s) 62
HaeIII GGCC 2 cut(s) 27, 202
HapII CCGG 1 cut(s) 198
Hin1II CATG 1 cut(s) 67
HpaII CCGG 1 cut(s) 198
HphI GGTGA 1 cut(s) 31
Hpy188I TCNGA 2 cut(s) 70, 89
HpyAV CCTTC 2 cut(s) 84, 88
HpyCH4V TGCA 3 cut(s) 57, 131, 248
HpyF3I CTNAG 3 cut(s) 33, 69, 314
Hsp92II CATG 1 cut(s) 67
Kzo9I GATC 3 cut(s) 21, 115, 348
LpnPI CCDG 6 cut(s) 41, 45, 92, 203, 211, 216
LweI GCATC 2 cut(s) 118, 184
MaeIII GTNAC 1 cut(s) 205
MalI GATC 3 cut(s) 23, 117, 350
MboI GATC 3 cut(s) 21, 115, 348
MboII GAAGA 2 cut(s) 263, 358
MflI RGATCY 1 cut(s) 348
MluCI AATT 7 cut(s) 109, 227, 262, 290, 300, 321, 336
MnlI CCTC 2 cut(s) 86, 151
Mph1103I ATGCAT 1 cut(s) 133
MseI TTAA 1 cut(s) 320
MspI CCGG 1 cut(s) 198
MspR9I CCNGG 1 cut(s) 199
NciI CCSGG 1 cut(s) 199
NdeII GATC 3 cut(s) 21, 115, 348
NlaIII CATG 1 cut(s) 67
NsiI ATGCAT 1 cut(s) 133
NspI RCATGY 1 cut(s) 67
PspPI GGNCC 1 cut(s) 200
PsuI RGATCY 1 cut(s) 348
RsaI GTAC 1 cut(s) 222
RsaNI GTAC 1 cut(s) 221
SaqAI TTAA 1 cut(s) 320
Sau3AI GATC 3 cut(s) 21, 115, 348
Sau96I GGNCC 1 cut(s) 200
ScrFI CCNGG 1 cut(s) 199
SetI ASST 4 cut(s) 84, 99, 162, 222
SfaNI GCATC 2 cut(s) 118, 184
Sse9I AATT 7 cut(s) 109, 227, 262, 290, 300, 321, 336
StyD4I CCNGG 1 cut(s) 197
TaqI TCGA 1 cut(s) 284
TasI AATT 7 cut(s) 109, 227, 262, 290, 300, 321, 336
Tru1I TTAA 1 cut(s) 320
Tru9I TTAA 1 cut(s) 320
TspDTI ATGAA 1 cut(s) 359
XagI CCTNNNNNAGG 1 cut(s) 36
XapI RAATTY 3 cut(s) 109, 290, 300
XceI RCATGY 1 cut(s) 67
Zsp2I ATGCAT 1 cut(s) 133
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.