pycom01g09230

Protein of unknown function (DUF1681)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
N/A
Physical Location & Seq
Forward (+)
10227906 .. 10228320
415 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 243 bp
ATGCTCGCGCACCCTCATCCAGTGGAACCTGTAACTGATAGCTGCAGATATTTTGTTCTATGTGTAGAGGGGAACATTGGTGAGCTTATATACTCTCTCATTGTTGCAATCTCTAATGATTTAGTGAATCCTATTATCCTATCGTTGGAACAATTCAAAGAGTGTTTTAGCCTGTATTTCCTTCCGTTATTGGCTCCTAAGGTAGATTTTTTCCCCTTACCCAGTTTACTGTTGTGCATTTAA

Protein Analysis

81

Amino Acids

8.99

Weight (kDa)

4.54

Isoelectric Point (pI)

36.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 8
AfiI CCNNNNNNNGG 1 cut(s) 145
AgsI TTSAA 1 cut(s) 157
AluBI AGCT 2 cut(s) 42, 85
AluI AGCT 2 cut(s) 42, 85
ApeKI GCWGC 1 cut(s) 42
AspLEI GCGC 1 cut(s) 10
AsuHPI GGTGA 1 cut(s) 92
AxyI CCTNAGG 1 cut(s) 198
BbvI GCAGC 1 cut(s) 29
BfmI CTRYAG 1 cut(s) 43
BisI GCNGC 1 cut(s) 43
BlsI GCNGC 1 cut(s) 44
BmiI GGNNCC 2 cut(s) 27, 195
BmrI ACTGGG 1 cut(s) 216
BmuI ACTGGG 1 cut(s) 216
Bsc4I CCNNNNNNNGG 1 cut(s) 145
Bse1I ACTGG 2 cut(s) 20, 222
Bse21I CCTNAGG 1 cut(s) 198
BseGI GGATG 1 cut(s) 16
BseLI CCNNNNNNNGG 1 cut(s) 145
BseNI ACTGG 2 cut(s) 20, 222
BseXI GCAGC 1 cut(s) 29
Bsh1236I CGCG 1 cut(s) 8
BslI CCNNNNNNNGG 1 cut(s) 145
BspFNI CGCG 1 cut(s) 8
BspLI GGNNCC 2 cut(s) 27, 195
BspMAI CTGCAG 1 cut(s) 47
BsrI ACTGG 2 cut(s) 20, 222
Bst4CI ACNGT 1 cut(s) 231
BstC8I GCNNGC 1 cut(s) 6
BstDEI CTNAG 1 cut(s) 198
BstF5I GGATG 1 cut(s) 16
BstFNI CGCG 1 cut(s) 8
BstHHI GCGC 1 cut(s) 10
BstSFI CTRYAG 1 cut(s) 43
BstUI CGCG 1 cut(s) 8
BstV1I GCAGC 1 cut(s) 29
Bsu36I CCTNAGG 1 cut(s) 198
BtsCI GGATG 1 cut(s) 16
BtsIMutI CAGTG 1 cut(s) 27
Cac8I GCNNGC 1 cut(s) 6
CfoI GCGC 1 cut(s) 10
CviJI RGCY 4 cut(s) 42, 85, 171, 194
CviKI_1 RGCY 4 cut(s) 42, 85, 171, 194
DdeI CTNAG 1 cut(s) 198
Eco81I CCTNAGG 1 cut(s) 198
FaiI YATR 3 cut(s) 61, 89, 91
Fnu4HI GCNGC 1 cut(s) 43
FokI GGATG 1 cut(s) 3
Fsp4HI GCNGC 1 cut(s) 43
GlaI GCGC 1 cut(s) 9
GluI GCNGC 1 cut(s) 43
HhaI GCGC 1 cut(s) 10
Hin6I GCGC 1 cut(s) 8
HinP1I GCGC 1 cut(s) 8
HinfI GANTC 1 cut(s) 127
HphI GGTGA 1 cut(s) 92
Hpy166II GTNNAC 1 cut(s) 227
Hpy8I GTNNAC 1 cut(s) 227
HpyAV CCTTC 1 cut(s) 191
HpyCH4III ACNGT 1 cut(s) 231
HpyCH4V TGCA 3 cut(s) 45, 107, 237
HpyF3I CTNAG 1 cut(s) 198
HspAI GCGC 1 cut(s) 8
LmnI GCTCC 1 cut(s) 199
LpnPI CCDG 4 cut(s) 33, 42, 185, 235
Lsp1109I GCAGC 1 cut(s) 29
MaeIII GTNAC 1 cut(s) 31
MluCI AATT 1 cut(s) 152
MmeI TCCRAC 1 cut(s) 126
MnlI CCTC 2 cut(s) 24, 61
MseI TTAA 1 cut(s) 241
MvnI CGCG 1 cut(s) 8
NlaIV GGNNCC 2 cut(s) 27, 195
PfeI GAWTC 1 cut(s) 127
PkrI GCNGC 1 cut(s) 44
PspN4I GGNNCC 2 cut(s) 27, 195
PstI CTGCAG 1 cut(s) 47
SaqAI TTAA 1 cut(s) 241
SatI GCNGC 1 cut(s) 43
SetI ASST 4 cut(s) 31, 44, 87, 204
SfcI CTRYAG 1 cut(s) 43
SgeI CNNG 6 cut(s) 17, 19, 32, 41, 184, 234
Sse9I AATT 1 cut(s) 152
TaaI ACNGT 1 cut(s) 231
TasI AATT 1 cut(s) 152
TfiI GAWTC 1 cut(s) 127
Tru1I TTAA 1 cut(s) 241
Tru9I TTAA 1 cut(s) 241
TscAI CASTG 1 cut(s) 27
TseI GCWGC 1 cut(s) 42
TspGWI ACGGA 1 cut(s) 174
TspRI CASTG 1 cut(s) 27
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.