pycom01g09260

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
10236743 .. 10238850
2108 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1482 bp
ATGTCCTCTAATCTAATAACGCCAAGACTAAATTTCAATAACCTTGAAGTATCGCATGGAGTATCGCACGGGGTCCAAGACAAGACAATACAATTCCACTTACATCGTGGAAATTTTGGTTTGCAAGTCCCTATTATCCTCAACTTGTACTTTACTTTGAAGCCTTGTGGGAATCATTCATCCTTCCTCTTATCATCCAAAACGACTTTTGACTTTTTGCAATTTGTTTGGAAAATAAATGTGAATTTGTCTCTCAAGAGTTGGGACGTTTTCCTTGCAACTTGTTTGGAAAATAAATGTAAATTTATTTTCTCAACAGTTGAGACAGTTTCCGCGATTTTTAGCTTAGTCCAAATAACAACGAAACAATCAACGCAGAATTGTGTTGATTGTTGCAGGCTTTGTCATTATCTTGGAGAGACGAGTCATCCTCTAATTGCTACACCTACCTACAGAAAAGTAGTTGGTCCACTCACACATGTTACATTTCCACTTGCATCGTGGAAATTTTGGTTTGTAGGTTGTTCTCAAACTTTGGAGAAGAATCATCTATTTCGTGGGAGTCATTCATCCTTCCTCTTATCCTCCAAAACAACTTGCAACTTGCAACATGAATTAGGCATTCTGACTATTTTTAAGACGGTTTCCGTGCTTTTTAGCTTGATCCAAATAACAAACAAAACAAAACAACCAACGCGGAATTGTGTTGATTGTTGTAGGCTTTGTCATTATTTTGAAGGGACAAGTCATCCTCTAATTACTGCACCTACCTACAGAAAAGTAGGGACTCAGTGTGTGGATTGTATTGTGAACTATTGCGTACTCACCCAGCATTGTAATACACTCACAGCTTTAATTGTACACTTCTTCTTCATTCTTCAATCCTGGTGCTTGAAGAAACTCTTTCATAATTCCATTGTGGTGCTACTTTTTCTACAATGTTTCAACCCTTCCCTATCCTCTGGATTCTATAATGTTTCTTTCGGTTGTGTATTTCAATCCTTTTTTGTATTTCAATCCTGTTCTTTTCAGGATACCTCCTTTAAACAACTTTTCCCATTCTTCTATAACATAATGTTTACATCTTCTAAACATAATCTTTCTAGCAATTTTAAACAGAAAACTAATGAAAATGGCCTAAAAACTTTGAGTTTTAACGATAAGGACAAAATAAAGGGTAAAGTGAATGGTATCAAAATTAACTTTTTACTTTTTATTAAAGTTTTTAATTTTAAATCCGCAGTATCGCGCAGACTTTACTTTCTAGTACATACTAGAGAGAGCAAGAGAGAGAATAGTGGGAATCATTCACACGTGTGGAGTTTAATTTGCGGACATATTTTTTTACTGTTTTTAACTTTTTGGAAATATACTTATTCACACCCAACACATTACACTGTCGGTTGTTTTCCATACCCCCTGAGTCCTCACCATTTGAACTACACTTGCAGCTTTCCTTTTGCTCCTAAATCAAAATCCTGA

Protein Analysis

494

Amino Acids

56.63

Weight (kDa)

9.37

Isoelectric Point (pI)

28.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022521)

Species Orthologous Gene IDs
pyrus_communis pycom01g09240 pycom01g09250 pycom01g09260 pycom01g09370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 3 cut(s) 335, 697, 1249
AciI CCGC 4 cut(s) 333, 697, 1239, 1332
AclWI GGATC 1 cut(s) 658
AcsI RAATTY 5 cut(s) 31, 112, 244, 302, 506
AcvI CACGTG 1 cut(s) 1315
AfaI GTAC 4 cut(s) 149, 822, 861, 1269
AflIII ACRYGT 3 cut(s) 478, 1312, 1314
AjnI CCWGG 1 cut(s) 884
AleI CACNNNNGTG 1 cut(s) 1315
AluBI AGCT 4 cut(s) 345, 660, 851, 1452
AluI AGCT 4 cut(s) 345, 660, 851, 1452
Alw26I GTCTC 3 cut(s) 255, 317, 413
AlwI GGATC 1 cut(s) 658
AoxI GGCC 1 cut(s) 1135
ApeKI GCWGC 1 cut(s) 1449
ApoI RAATTY 5 cut(s) 31, 112, 244, 302, 506
AspLEI GCGC 1 cut(s) 1251
AspS9I GGNCC 2 cut(s) 73, 467
AsuHPI GGTGA 2 cut(s) 817, 1421
AvaII GGWCC 2 cut(s) 73, 467
BbrPI CACGTG 1 cut(s) 1315
BbvI GCAGC 1 cut(s) 1461
BciT130I CCWGG 1 cut(s) 886
BciVI GTATCC 1 cut(s) 1027
BcoDI GTCTC 3 cut(s) 255, 317, 413
BfaI CTAG 3 cut(s) 1104, 1265, 1275
BfmI CTRYAG 2 cut(s) 451, 772
BfuI GTATCC 1 cut(s) 1027
BisI GCNGC 1 cut(s) 1450
BlsI GCNGC 1 cut(s) 1451
Bme1390I CCNGG 1 cut(s) 886
Bme18I GGWCC 2 cut(s) 73, 467
BmgT120I GGNCC 2 cut(s) 73, 467
BmiI GGNNCC 1 cut(s) 74
BmrFI CCNGG 1 cut(s) 886
BmsI GCATC 1 cut(s) 506
BplI GAGNNNNNCTC 2 cut(s) 415, 447
BpuEI CTTGAG 1 cut(s) 239
BsaAI YACGTR 1 cut(s) 1315
BseBI CCWGG 1 cut(s) 886
BseGI GGATG 5 cut(s) 179, 194, 427, 569, 748
BseMII CTCAG 2 cut(s) 803, 1412
BseXI GCAGC 1 cut(s) 1461
BseYI CCCAGC 1 cut(s) 828
BsgI GTGCAG 1 cut(s) 747
Bsh1236I CGCG 3 cut(s) 335, 697, 1249
BshFI GGCC 1 cut(s) 1137
BslFI GGGAC 4 cut(s) 113, 278, 754, 799
BsmAI GTCTC 3 cut(s) 255, 317, 413
BsmBI CGTCTC 1 cut(s) 413
BsmFI GGGAC 4 cut(s) 113, 278, 754, 799
BsmI GAATGC 1 cut(s) 621
BsnI GGCC 1 cut(s) 1137
Bsp1407I TGTACA 1 cut(s) 859
Bsp143I GATC 1 cut(s) 663
BspACI CCGC 4 cut(s) 333, 697, 1239, 1332
BspANI GGCC 1 cut(s) 1137
BspCNI CTCAG 2 cut(s) 802, 1413
BspFNI CGCG 3 cut(s) 335, 697, 1249
BspLI GGNNCC 1 cut(s) 74
BspPI GGATC 1 cut(s) 658
BsrGI TGTACA 1 cut(s) 859
BssMI GATC 1 cut(s) 663
Bst2UI CCWGG 1 cut(s) 886
Bst4CI ACNGT 5 cut(s) 319, 328, 643, 1350, 1399
BstAUI TGTACA 1 cut(s) 859
BstBAI YACGTR 1 cut(s) 1315
BstC8I GCNNGC 1 cut(s) 398
BstDEI CTNAG 3 cut(s) 346, 789, 1421
BstF5I GGATG 5 cut(s) 179, 194, 427, 569, 748
BstFNI CGCG 3 cut(s) 335, 697, 1249
BstHHI GCGC 1 cut(s) 1251
BstKTI GATC 1 cut(s) 666
BstMAI GTCTC 3 cut(s) 255, 317, 413
BstMBI GATC 1 cut(s) 663
BstNI CCWGG 1 cut(s) 886
BstNSI RCATGY 1 cut(s) 482
BstSCI CCNGG 1 cut(s) 884
BstSFI CTRYAG 2 cut(s) 451, 772
BstUI CGCG 3 cut(s) 335, 697, 1249
BstV1I GCAGC 1 cut(s) 1461
BsuI GTATCC 1 cut(s) 1027
BsuRI GGCC 1 cut(s) 1137
BtsCI GGATG 5 cut(s) 179, 194, 427, 569, 748
BtsIMutI CAGTG 2 cut(s) 797, 1395
Cac8I GCNNGC 1 cut(s) 398
CfoI GCGC 1 cut(s) 1251
Cfr13I GGNCC 2 cut(s) 73, 467
Csp6I GTAC 4 cut(s) 148, 821, 860, 1268
CviAII CATG 3 cut(s) 56, 479, 611
CviJI RGCY 8 cut(s) 163, 345, 400, 660, 721, 851, 1137, 1452
CviKI_1 RGCY 8 cut(s) 163, 345, 400, 660, 721, 851, 1137, 1452
CviQI GTAC 4 cut(s) 148, 821, 860, 1268
DdeI CTNAG 3 cut(s) 346, 789, 1421
DpnI GATC 1 cut(s) 665
DpnII GATC 1 cut(s) 663
DraI TTTAAA 3 cut(s) 1045, 1114, 1234
Eco47I GGWCC 2 cut(s) 73, 467
Eco72I CACGTG 1 cut(s) 1315
EcoRII CCWGG 1 cut(s) 884
Esp3I CGTCTC 1 cut(s) 413
FaeI CATG 3 cut(s) 59, 482, 614
FalI AAGNNNNNCTT 2 cut(s) 887, 919
FaqI GGGAC 4 cut(s) 113, 278, 754, 799
FatI CATG 3 cut(s) 55, 478, 610
Fnu4HI GCNGC 1 cut(s) 1450
FokI GGATG 5 cut(s) 166, 181, 414, 556, 735
Fsp4HI GCNGC 1 cut(s) 1450
FspBI CTAG 3 cut(s) 1104, 1265, 1275
GlaI GCGC 1 cut(s) 1250
GluI GCNGC 1 cut(s) 1450
GsaI CCCAGC 1 cut(s) 832
HaeIII GGCC 1 cut(s) 1137
HhaI GCGC 1 cut(s) 1251
Hin1II CATG 3 cut(s) 59, 482, 614
Hin6I GCGC 1 cut(s) 1249
HinP1I GCGC 1 cut(s) 1249
HinfI GANTC 8 cut(s) 172, 424, 544, 562, 787, 966, 1303, 1423
HphI GGTGA 2 cut(s) 817, 1421
Hpy166II GTNNAC 4 cut(s) 470, 811, 862, 1080
Hpy188I TCNGA 1 cut(s) 627
Hpy188III TCNNGA 4 cut(s) 256, 963, 1031, 1479
Hpy8I GTNNAC 4 cut(s) 470, 811, 862, 1080
HpyAV CCTTC 4 cut(s) 193, 583, 731, 960
HpyCH4III ACNGT 5 cut(s) 319, 328, 643, 1350, 1399
HpyCH4IV ACGT 2 cut(s) 267, 1314
HpyCH4V TGCA 9 cut(s) 124, 220, 278, 396, 497, 600, 607, 764, 1449
HpyF3I CTNAG 3 cut(s) 346, 789, 1421
HpySE526I ACGT 2 cut(s) 267, 1314
Hsp92II CATG 3 cut(s) 59, 482, 614
HspAI GCGC 1 cut(s) 1249
Kzo9I GATC 1 cut(s) 663
LmnI GCTCC 1 cut(s) 1468
LpnPI CCDG 8 cut(s) 382, 842, 871, 898, 948, 1016, 1033, 1433
Lsp1109I GCAGC 1 cut(s) 1461
LweI GCATC 1 cut(s) 506
MaeI CTAG 3 cut(s) 1104, 1265, 1275
MaeII ACGT 2 cut(s) 267, 1314
MaeIII GTNAC 1 cut(s) 481
MalI GATC 1 cut(s) 665
MboI GATC 1 cut(s) 663
MboII GAAGA 7 cut(s) 553, 859, 862, 869, 907, 1054, 1077
MlyI GAGTC 4 cut(s) 433, 571, 781, 1432
MslI CAYNNNNRTG 2 cut(s) 920, 1315
MspR9I CCNGG 1 cut(s) 886
Mva1269I GAATGC 1 cut(s) 621
MvaI CCWGG 1 cut(s) 886
MvnI CGCG 3 cut(s) 335, 697, 1249
NdeII GATC 1 cut(s) 663
NlaIII CATG 3 cut(s) 59, 482, 614
NlaIV GGNNCC 1 cut(s) 74
NspI RCATGY 1 cut(s) 482
OliI CACNNNNGTG 1 cut(s) 1315
PciI ACATGT 1 cut(s) 478
PctI GAATGC 1 cut(s) 621
PfeI GAWTC 4 cut(s) 172, 544, 966, 1303
PkrI GCNGC 1 cut(s) 1451
PleI GAGTC 4 cut(s) 432, 570, 781, 1431
PmaCI CACGTG 1 cut(s) 1315
PmlI CACGTG 1 cut(s) 1315
PpsI GAGTC 4 cut(s) 432, 570, 781, 1431
Ppu21I YACGTR 1 cut(s) 1315
PscI ACATGT 1 cut(s) 478
Psp6I CCWGG 1 cut(s) 884
PspCI CACGTG 1 cut(s) 1315
PspFI CCCAGC 1 cut(s) 828
PspGI CCWGG 1 cut(s) 884
PspN4I GGNNCC 1 cut(s) 74
PspPI GGNCC 2 cut(s) 73, 467
RsaI GTAC 4 cut(s) 149, 822, 861, 1269
RsaNI GTAC 4 cut(s) 148, 821, 860, 1268
RseI CAYNNNNRTG 2 cut(s) 920, 1315
SatI GCNGC 1 cut(s) 1450
Sau3AI GATC 1 cut(s) 663
Sau96I GGNCC 2 cut(s) 73, 467
SchI GAGTC 4 cut(s) 433, 571, 781, 1432
ScrFI CCNGG 1 cut(s) 886
SfaNI GCATC 1 cut(s) 506
SfcI CTRYAG 2 cut(s) 451, 772
SinI GGWCC 2 cut(s) 73, 467
SmiMI CAYNNNNRTG 2 cut(s) 920, 1315
SmlI CTYRAG 1 cut(s) 254
SmoI CTYRAG 1 cut(s) 254
SsiI CCGC 4 cut(s) 333, 697, 1239, 1332
SspMI CTAG 3 cut(s) 1104, 1265, 1275
StyD4I CCNGG 1 cut(s) 884
TaaI ACNGT 5 cut(s) 319, 328, 643, 1350, 1399
TaiI ACGT 2 cut(s) 270, 1317
TatI WGTACW 3 cut(s) 147, 859, 1267
TfiI GAWTC 4 cut(s) 172, 544, 966, 1303
TscAI CASTG 2 cut(s) 797, 1402
TseI GCWGC 1 cut(s) 1449
TspDTI ATGAA 6 cut(s) 168, 558, 627, 862, 896, 1143
TspGWI ACGGA 1 cut(s) 637
TspRI CASTG 2 cut(s) 797, 1402
VpaK11BI GGWCC 2 cut(s) 73, 467
XapI RAATTY 5 cut(s) 31, 112, 244, 302, 506
XceI RCATGY 1 cut(s) 482
XcmI CCANNNNNNNNNTGG 2 cut(s) 104, 498
XspI CTAG 3 cut(s) 1104, 1265, 1275
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.