pycom01g09370

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
10303943 .. 10304347
405 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 405 bp
ATGGAGAATGACGGAATCATGTGCTTGAAGAAACTCTTTCATACTTCCATTGTGGTGCTACTTTTTCTACAATGTTTCAACCCTTCCCTATCCTCTGGATTCTATAATGTTTCTGTCGATTTCAGAGCAATTAGCCATCGGGTGGTGACGAGGTGCATAGAGAGTGAAAGGGAAGCACTCCTTGCTTTCAAACAAGGCCTGGTGGATGACTATGATCGATCCTCTCCTCGTGGGGAAGAGAAGAACACAAGCAAGATTGTTGCCAATGGCTTGGCGTCCACTGCAGCAATCGAACCAACCATGTTACTCAACTTCATCTTGGATGGTCTTATTTGGATCAAGCTTACGCACTTCAACAGAAAGGACGCCCACAGCATATCTCTTATTATTTGCAAGGTAAGATGA

Protein Analysis

135

Amino Acids

15.1

Weight (kDa)

8.4

Isoelectric Point (pI)

27.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022521)

Species Orthologous Gene IDs
pyrus_communis pycom01g09240 pycom01g09250 pycom01g09260 pycom01g09370

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 142
AclWI GGATC 2 cut(s) 213, 344
AcyI GRCGYC 2 cut(s) 275, 366
AfiI CCNNNNNNNGG 1 cut(s) 142
AgsI TTSAA 4 cut(s) 28, 79, 190, 355
AjnI CCWGG 1 cut(s) 198
AluBI AGCT 1 cut(s) 343
AluI AGCT 1 cut(s) 343
AlwI GGATC 2 cut(s) 213, 344
AoxI GGCC 1 cut(s) 196
ApeKI GCWGC 1 cut(s) 284
AsuHPI GGTGA 1 cut(s) 157
BauI CACGAG 1 cut(s) 228
BbvI GCAGC 1 cut(s) 296
BccI CCATC 2 cut(s) 144, 317
BciT130I CCWGG 1 cut(s) 200
BfmI CTRYAG 1 cut(s) 282
BisI GCNGC 1 cut(s) 285
BlsI GCNGC 1 cut(s) 286
Bme1390I CCNGG 1 cut(s) 200
BmrFI CCNGG 1 cut(s) 200
Bsa29I ATCGAT 1 cut(s) 217
BsaHI GRCGYC 2 cut(s) 275, 366
Bsc4I CCNNNNNNNGG 1 cut(s) 142
BseBI CCWGG 1 cut(s) 200
BseCI ATCGAT 1 cut(s) 217
BseGI GGATG 2 cut(s) 211, 328
BseLI CCNNNNNNNGG 1 cut(s) 142
BseRI GAGGAG 1 cut(s) 216
BseXI GCAGC 1 cut(s) 296
BshFI GGCC 1 cut(s) 198
BshVI ATCGAT 1 cut(s) 217
BslI CCNNNNNNNGG 1 cut(s) 142
BsnI GGCC 1 cut(s) 198
Bsp143I GATC 3 cut(s) 214, 218, 336
BspANI GGCC 1 cut(s) 198
BspDI ATCGAT 1 cut(s) 217
BspMAI CTGCAG 1 cut(s) 286
BspPI GGATC 2 cut(s) 213, 344
BssMI GATC 3 cut(s) 214, 218, 336
BssNI GRCGYC 2 cut(s) 275, 366
BssSI CACGAG 1 cut(s) 228
Bst2BI CACGAG 1 cut(s) 228
Bst2UI CCWGG 1 cut(s) 200
Bst6I CTCTTC 1 cut(s) 231
BstACI GRCGYC 2 cut(s) 275, 366
BstAPI GCANNNNNTGC 1 cut(s) 182
BstF5I GGATG 2 cut(s) 211, 328
BstKTI GATC 3 cut(s) 217, 221, 339
BstMBI GATC 3 cut(s) 214, 218, 336
BstMWI GCNNNNNNNGC 2 cut(s) 182, 281
BstNI CCWGG 1 cut(s) 200
BstSCI CCNGG 1 cut(s) 198
BstSFI CTRYAG 1 cut(s) 282
BstV1I GCAGC 1 cut(s) 296
BstXI CCANNNNNNTGG 1 cut(s) 271
Bsu15I ATCGAT 1 cut(s) 217
BsuRI GGCC 1 cut(s) 198
BsuTUI ATCGAT 1 cut(s) 217
BtsCI GGATG 2 cut(s) 211, 328
BtsI GCAGTG 1 cut(s) 279
BtsIMutI CAGTG 1 cut(s) 279
ClaI ATCGAT 1 cut(s) 217
CseI GACGC 2 cut(s) 264, 374
CviAII CATG 2 cut(s) 19, 301
CviJI RGCY 4 cut(s) 135, 198, 270, 343
CviKI_1 RGCY 4 cut(s) 135, 198, 270, 343
DpnI GATC 3 cut(s) 216, 220, 338
DpnII GATC 3 cut(s) 214, 218, 336
Eam1104I CTCTTC 1 cut(s) 231
EarI CTCTTC 1 cut(s) 231
Eco147I AGGCCT 1 cut(s) 198
EcoRII CCWGG 1 cut(s) 198
FaeI CATG 2 cut(s) 22, 304
FaiI YATR 7 cut(s) 20, 42, 105, 158, 213, 302, 377
FalI AAGNNNNNCTT 4 cut(s) 20, 52, 165, 197
FatI CATG 2 cut(s) 18, 300
Fnu4HI GCNGC 1 cut(s) 285
FokI GGATG 2 cut(s) 218, 335
Fsp4HI GCNGC 1 cut(s) 285
GluI GCNGC 1 cut(s) 285
HaeIII GGCC 1 cut(s) 198
HgaI GACGC 2 cut(s) 264, 374
Hin1I GRCGYC 2 cut(s) 275, 366
Hin1II CATG 2 cut(s) 22, 304
HindIII AAGCTT 1 cut(s) 341
HinfI GANTC 2 cut(s) 15, 99
HphI GGTGA 1 cut(s) 157
Hpy166II GTNNAC 1 cut(s) 279
Hpy188I TCNGA 1 cut(s) 125
Hpy188III TCNNGA 1 cut(s) 96
Hpy8I GTNNAC 1 cut(s) 279
HpyAV CCTTC 1 cut(s) 93
HpyCH4V TGCA 3 cut(s) 156, 284, 393
HpyF10VI GCNNNNNNNGC 2 cut(s) 182, 281
Hsp92I GRCGYC 2 cut(s) 275, 366
Hsp92II CATG 2 cut(s) 22, 304
Kzo9I GATC 3 cut(s) 214, 218, 336
LpnPI CCDG 3 cut(s) 81, 185, 212
Lsp1109I GCAGC 1 cut(s) 296
MaeIII GTNAC 2 cut(s) 145, 303
MalI GATC 3 cut(s) 216, 220, 338
MboI GATC 3 cut(s) 214, 218, 336
MboII GAAGA 3 cut(s) 40, 248, 253
MluCI AATT 1 cut(s) 129
MnlI CCTC 4 cut(s) 103, 144, 232, 237
MslI CAYNNNNRTG 1 cut(s) 53
MspR9I CCNGG 1 cut(s) 200
MvaI CCWGG 1 cut(s) 200
MwoI GCNNNNNNNGC 2 cut(s) 182, 281
NdeII GATC 3 cut(s) 214, 218, 336
NlaIII CATG 2 cut(s) 22, 304
NmuCI GTSAC 1 cut(s) 145
PceI AGGCCT 1 cut(s) 198
PfeI GAWTC 2 cut(s) 15, 99
PflMI CCANNNNNTGG 1 cut(s) 142
PkrI GCNGC 1 cut(s) 286
Psp6I CCWGG 1 cut(s) 198
PspGI CCWGG 1 cut(s) 198
PstI CTGCAG 1 cut(s) 286
RseI CAYNNNNRTG 1 cut(s) 53
SatI GCNGC 1 cut(s) 285
Sau3AI GATC 3 cut(s) 214, 218, 336
ScrFI CCNGG 1 cut(s) 200
SetI ASST 3 cut(s) 155, 345, 399
SfcI CTRYAG 1 cut(s) 282
SmiMI CAYNNNNRTG 1 cut(s) 53
Sse9I AATT 1 cut(s) 129
SseBI AGGCCT 1 cut(s) 198
StuI AGGCCT 1 cut(s) 198
StyD4I CCNGG 1 cut(s) 198
TaqI TCGA 3 cut(s) 117, 217, 291
TasI AATT 1 cut(s) 129
TfiI GAWTC 2 cut(s) 15, 99
TscAI CASTG 1 cut(s) 286
TseFI GTSAC 1 cut(s) 145
TseI GCWGC 1 cut(s) 284
Tsp45I GTSAC 1 cut(s) 145
TspDTI ATGAA 2 cut(s) 29, 304
TspGWI ACGGA 1 cut(s) 27
TspRI CASTG 1 cut(s) 286
Van91I CCANNNNNTGG 1 cut(s) 142
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.