pycom01g09400

anion transporter 2

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
N/A
Physical Location & Seq
Forward (+)
10320947 .. 10322404
1458 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 342 bp
ATGGCGATCGGAGGTTTGATATCGAACCGGAATTTCGGTTCTTTTATCGGTTCAGGAAAGGTACGTCAAACAAACCACGCCATTGTGCATCACAAGGGAGAGCGTCTGTATTATCAGGGGAAAACAGTTTACCCAACTTTATGTACTCCCAGGGCTAGTGGTTCTATATCTGGATATTCGCACAGCCCTTATCAGCGTGCAATTGATTCTTCATATACAAACGTTCTGAAGGCAACAGGTAGGGTGCGTGATGAAGGCAATAACCCTTATCTAATGTCTTTGCAATCTGGTATAAGGTCTCAGAGCACCATTACAAAACAAATACTTAGAGGAAGATGTTAA

Protein Analysis

114

Amino Acids

12.44

Weight (kDa)

10.29

Isoelectric Point (pI)

39.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclI AACGTT 1 cut(s) 222
AcsI RAATTY 1 cut(s) 31
AcuI CTGAAG 1 cut(s) 248
AfaI GTAC 2 cut(s) 63, 145
AjnI CCWGG 1 cut(s) 149
AloI GAACNNNNNNTCC 2 cut(s) 22, 54
Alw21I GWGCWC 1 cut(s) 308
Alw26I GTCTC 1 cut(s) 303
ApoI RAATTY 1 cut(s) 31
Bbv12I GWGCWC 1 cut(s) 308
BciT130I CCWGG 1 cut(s) 151
BcoDI GTCTC 1 cut(s) 303
BfaI CTAG 1 cut(s) 156
Bme1390I CCNGG 1 cut(s) 151
BmrFI CCNGG 1 cut(s) 151
BmsI GCATC 1 cut(s) 97
BsaI GGTCTC 1 cut(s) 303
BsaJI CCNNGG 2 cut(s) 149, 150
BsaWI WCCGGW 1 cut(s) 27
BseBI CCWGG 1 cut(s) 151
BseDI CCNNGG 2 cut(s) 149, 150
BseMII CTCAG 1 cut(s) 314
Bsh1285I CGRYCG 1 cut(s) 9
BsiEI CGRYCG 1 cut(s) 9
BsiHKAI GWGCWC 1 cut(s) 308
BsiSI CCGG 1 cut(s) 28
BsmAI GTCTC 1 cut(s) 303
Bso31I GGTCTC 1 cut(s) 303
Bsp1286I GDGCHC 1 cut(s) 308
Bsp143I GATC 1 cut(s) 6
BspCNI CTCAG 1 cut(s) 313
BspTNI GGTCTC 1 cut(s) 303
BssECI CCNNGG 2 cut(s) 149, 150
BssMI GATC 1 cut(s) 6
Bst2UI CCWGG 1 cut(s) 151
Bst4CI ACNGT 1 cut(s) 127
BstC8I GCNNGC 1 cut(s) 198
BstDEI CTNAG 2 cut(s) 300, 326
BstKTI GATC 1 cut(s) 9
BstMAI GTCTC 1 cut(s) 303
BstMBI GATC 1 cut(s) 6
BstMCI CGRYCG 1 cut(s) 9
BstNI CCWGG 1 cut(s) 151
BstSCI CCNGG 1 cut(s) 149
Cac8I GCNNGC 1 cut(s) 198
CseI GACGC 1 cut(s) 92
Csp6I GTAC 2 cut(s) 62, 144
CviJI RGCY 2 cut(s) 155, 186
CviKI_1 RGCY 2 cut(s) 155, 186
CviQI GTAC 2 cut(s) 62, 144
DdeI CTNAG 2 cut(s) 300, 326
DpnI GATC 1 cut(s) 8
DpnII GATC 1 cut(s) 6
Eco31I GGTCTC 1 cut(s) 303
Eco32I GATATC 1 cut(s) 21
Eco57I CTGAAG 1 cut(s) 248
EcoRII CCWGG 1 cut(s) 149
EcoRV GATATC 1 cut(s) 21
FaiI YATR 5 cut(s) 142, 167, 214, 216, 293
FspBI CTAG 1 cut(s) 156
HapII CCGG 1 cut(s) 28
HgaI GACGC 1 cut(s) 92
HinfI GANTC 1 cut(s) 206
HpaII CCGG 1 cut(s) 28
Hpy166II GTNNAC 1 cut(s) 130
Hpy188I TCNGA 3 cut(s) 11, 228, 303
Hpy188III TCNNGA 2 cut(s) 54, 171
Hpy8I GTNNAC 1 cut(s) 130
HpyAV CCTTC 2 cut(s) 223, 248
HpyCH4III ACNGT 1 cut(s) 127
HpyCH4IV ACGT 2 cut(s) 64, 222
HpyCH4V TGCA 3 cut(s) 88, 200, 283
HpyF3I CTNAG 2 cut(s) 300, 326
HpySE526I ACGT 2 cut(s) 64, 222
Kzo9I GATC 1 cut(s) 6
LpnPI CCDG 8 cut(s) 39, 41, 101, 136, 156, 163, 222, 273
LweI GCATC 1 cut(s) 97
MaeI CTAG 1 cut(s) 156
MaeII ACGT 2 cut(s) 64, 222
MalI GATC 1 cut(s) 8
MboI GATC 1 cut(s) 6
MboII GAAGA 1 cut(s) 201
MfeI CAATTG 1 cut(s) 201
MhlI GDGCHC 1 cut(s) 308
MluCI AATT 2 cut(s) 31, 201
MnlI CCTC 2 cut(s) 5, 323
MseI TTAA 1 cut(s) 340
MspI CCGG 1 cut(s) 28
MspR9I CCNGG 1 cut(s) 151
MunI CAATTG 1 cut(s) 201
MvaI CCWGG 1 cut(s) 151
NdeII GATC 1 cut(s) 6
PasI CCCWGGG 1 cut(s) 150
PfeI GAWTC 1 cut(s) 206
Ple19I CGATCG 1 cut(s) 9
Psp1406I AACGTT 1 cut(s) 222
Psp6I CCWGG 1 cut(s) 149
PspGI CCWGG 1 cut(s) 149
PvuI CGATCG 1 cut(s) 9
RsaI GTAC 2 cut(s) 63, 145
RsaNI GTAC 2 cut(s) 62, 144
SaqAI TTAA 1 cut(s) 340
Sau3AI GATC 1 cut(s) 6
ScrFI CCNGG 1 cut(s) 151
SduI GDGCHC 1 cut(s) 308
SetI ASST 6 cut(s) 16, 63, 67, 225, 241, 299
SfaNI GCATC 1 cut(s) 97
Sse9I AATT 2 cut(s) 31, 201
SspMI CTAG 1 cut(s) 156
StyD4I CCNGG 1 cut(s) 149
TaaI ACNGT 1 cut(s) 127
TaiI ACGT 2 cut(s) 67, 225
TaqI TCGA 1 cut(s) 23
TasI AATT 2 cut(s) 31, 201
TatI WGTACW 1 cut(s) 143
TfiI GAWTC 1 cut(s) 206
Tru1I TTAA 1 cut(s) 340
Tru9I TTAA 1 cut(s) 340
TspDTI ATGAA 2 cut(s) 201, 267
XapI RAATTY 1 cut(s) 31
XspI CTAG 1 cut(s) 156
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.