pycom01g21230

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
N/A
Physical Location & Seq
Forward (+)
19368494 .. 19368685
192 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 192 bp
ATGAATGAAGTCTTCCGACTGTACCCTTGGGCACCAAATGCACAAAGGCAAACCAAAGCCAACATTCAAGTGAGCGATGACTTGTCCATTCCAAGGGGAACCAACATGTGGATTGACATCGTCGGCATGCACCACGACCTAGCCTTATGGGGCGAGGATGTCAACGAGTTCGCCGGAAAGGTTCAAGGATGA

Protein Analysis

64

Amino Acids

7.18

Weight (kDa)

5.0

Isoelectric Point (pI)

21.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 2 - 57 5.9e-09 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 31
AccB7I CCANNNNNTGG 1 cut(s) 108
AfaI GTAC 1 cut(s) 23
AfiI CCNNNNNNNGG 2 cut(s) 93, 108
AflIII ACRYGT 1 cut(s) 105
AgsI TTSAA 2 cut(s) 68, 185
BaeGI GKGCMC 1 cut(s) 34
BanI GGYRCC 1 cut(s) 31
BbsI GAAGAC 1 cut(s) 4
BfaI CTAG 1 cut(s) 140
BmiI GGNNCC 2 cut(s) 33, 100
BpiI GAAGAC 1 cut(s) 4
BsaBI GATNNNNATC 1 cut(s) 116
BsaJI CCNNGG 2 cut(s) 26, 92
Bsc4I CCNNNNNNNGG 2 cut(s) 93, 108
Bse8I GATNNNNATC 1 cut(s) 116
BseDI CCNNGG 2 cut(s) 26, 92
BseGI GGATG 1 cut(s) 163
BseJI GATNNNNATC 1 cut(s) 116
BseLI CCNNNNNNNGG 2 cut(s) 93, 108
BseSI GKGCMC 1 cut(s) 34
BshNI GGYRCC 1 cut(s) 31
BsiSI CCGG 1 cut(s) 174
BslI CCNNNNNNNGG 2 cut(s) 93, 108
Bsp1286I GDGCHC 1 cut(s) 34
BspLI GGNNCC 2 cut(s) 33, 100
BspT107I GGYRCC 1 cut(s) 31
BssECI CCNNGG 2 cut(s) 26, 92
BssT1I CCWWGG 2 cut(s) 26, 92
Bst4CI ACNGT 1 cut(s) 21
BstAPI GCANNNNNTGC 1 cut(s) 38
BstC8I GCNNGC 1 cut(s) 128
BstF5I GGATG 1 cut(s) 163
BstMWI GCNNNNNNNGC 1 cut(s) 38
BstNSI RCATGY 2 cut(s) 109, 130
BstSLI GKGCMC 1 cut(s) 34
BstV2I GAAGAC 1 cut(s) 4
BtgZI GCGATG 1 cut(s) 90
BtsCI GGATG 1 cut(s) 163
Cac8I GCNNGC 1 cut(s) 128
Csp6I GTAC 1 cut(s) 22
CviAII CATG 2 cut(s) 106, 127
CviJI RGCY 2 cut(s) 59, 143
CviKI_1 RGCY 2 cut(s) 59, 143
CviQI GTAC 1 cut(s) 22
Eco130I CCWWGG 2 cut(s) 26, 92
EcoT14I CCWWGG 2 cut(s) 26, 92
ErhI CCWWGG 2 cut(s) 26, 92
FaeI CATG 2 cut(s) 109, 130
FaiI YATR 3 cut(s) 107, 128, 148
FatI CATG 2 cut(s) 105, 126
FokI GGATG 1 cut(s) 170
FspBI CTAG 1 cut(s) 140
HapII CCGG 1 cut(s) 174
Hin1II CATG 2 cut(s) 109, 130
HincII GTYRAC 1 cut(s) 163
HindII GTYRAC 1 cut(s) 163
HpaII CCGG 1 cut(s) 174
Hpy166II GTNNAC 1 cut(s) 163
Hpy188I TCNGA 1 cut(s) 17
Hpy8I GTNNAC 1 cut(s) 163
Hpy99I CGWCG 1 cut(s) 125
HpyCH4III ACNGT 1 cut(s) 21
HpyCH4V TGCA 2 cut(s) 41, 130
HpyF10VI GCNNNNNNNGC 1 cut(s) 38
Hsp92II CATG 2 cut(s) 109, 130
LpnPI CCDG 1 cut(s) 187
MaeI CTAG 1 cut(s) 140
MboII GAAGA 1 cut(s) 4
MhlI GDGCHC 1 cut(s) 34
MmeI TCCRAC 1 cut(s) 40
MnlI CCTC 1 cut(s) 148
MslI CAYNNNNRTG 1 cut(s) 68
MspI CCGG 1 cut(s) 174
MwoI GCNNNNNNNGC 1 cut(s) 38
NlaIII CATG 2 cut(s) 109, 130
NlaIV GGNNCC 2 cut(s) 33, 100
NspI RCATGY 2 cut(s) 109, 130
PaeI GCATGC 1 cut(s) 130
PciI ACATGT 1 cut(s) 105
PflFI GACNNNGTC 1 cut(s) 119
PflMI CCANNNNNTGG 1 cut(s) 108
PscI ACATGT 1 cut(s) 105
PspN4I GGNNCC 2 cut(s) 33, 100
PsyI GACNNNGTC 1 cut(s) 119
RsaI GTAC 1 cut(s) 23
RsaNI GTAC 1 cut(s) 22
RseI CAYNNNNRTG 1 cut(s) 68
SduI GDGCHC 1 cut(s) 34
SetI ASST 2 cut(s) 141, 183
SmiMI CAYNNNNRTG 1 cut(s) 68
SphI GCATGC 1 cut(s) 130
SspMI CTAG 1 cut(s) 140
StyI CCWWGG 2 cut(s) 26, 92
TaaI ACNGT 1 cut(s) 21
TspDTI ATGAA 2 cut(s) 17, 21
Tth111I GACNNNGTC 1 cut(s) 119
Van91I CCANNNNNTGG 1 cut(s) 108
XceI RCATGY 2 cut(s) 109, 130
XspI CTAG 1 cut(s) 140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.