pycom02g01040

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
N/A
Physical Location & Seq
Reverse (-)
592612 .. 593124
513 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 318 bp
ATGAAGAGGAATTTGGACTGGAATGTTACCGGTGCTCATGCTGCTTTATACGATCCTTTGAGTTATCTTAACACCAACTATGGTATAAGGCAATGGTTAAACTACTCGTTTCCTGCTAGCAAACTTGTTTTGGGTTTGCCTTACCACAGCTATGTTGGTTTCGATGATGTGGAAGTTATTAGAGTTAAGATTGCATTTGCCAAGGAAAAGAAGCTAATCGGTACCAATGTGTTTCATCAAGTCAGCAATGACAATCAAAATTGGGCGCTTTCTTGGGCACGTAGGCATTACTTATCCCACACGAGAGTTCAATTGTGA

Protein Analysis

106

Amino Acids

12.25

Weight (kDa)

9.64

Isoelectric Point (pI)

21.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 221
AccB1I GGYRCC 1 cut(s) 221
AclWI GGATC 1 cut(s) 47
AcsI RAATTY 1 cut(s) 10
AfaI GTAC 1 cut(s) 223
AgeI ACCGGT 1 cut(s) 29
AgsI TTSAA 1 cut(s) 311
AjuI GAANNNNNNNTTGG 1 cut(s) 28
AluBI AGCT 2 cut(s) 150, 214
AluI AGCT 2 cut(s) 150, 214
Alw21I GWGCWC 1 cut(s) 37
AlwI GGATC 1 cut(s) 47
ApeKI GCWGC 1 cut(s) 41
ApoI RAATTY 1 cut(s) 10
AsiGI ACCGGT 1 cut(s) 29
Asp718I GGTACC 1 cut(s) 221
AspLEI GCGC 1 cut(s) 268
AsuNHI GCTAGC 1 cut(s) 116
BaeGI GKGCMC 1 cut(s) 280
BaeI ACNNNNGTAYC 2 cut(s) 213, 246
BanI GGYRCC 1 cut(s) 221
BauI CACGAG 1 cut(s) 301
Bbv12I GWGCWC 1 cut(s) 37
BbvI GCAGC 1 cut(s) 28
BfaI CTAG 1 cut(s) 117
BfoI RGCGCY 1 cut(s) 269
BisI GCNGC 1 cut(s) 42
BlsI GCNGC 1 cut(s) 43
BmiI GGNNCC 1 cut(s) 223
BmtI GCTAGC 1 cut(s) 120
BsaAI YACGTR 1 cut(s) 281
BsaJI CCNNGG 1 cut(s) 201
BsaWI WCCGGW 1 cut(s) 29
Bse118I RCCGGY 1 cut(s) 29
Bse1I ACTGG 1 cut(s) 23
Bse3DI GCAATG 2 cut(s) 98, 253
BseDI CCNNGG 1 cut(s) 201
BseMI GCAATG 2 cut(s) 98, 253
BseNI ACTGG 1 cut(s) 23
BseSI GKGCMC 1 cut(s) 280
BseXI GCAGC 1 cut(s) 28
BshNI GGYRCC 1 cut(s) 221
BshTI ACCGGT 1 cut(s) 29
BsiHKAI GWGCWC 1 cut(s) 37
BsiSI CCGG 1 cut(s) 30
Bsp1286I GDGCHC 2 cut(s) 37, 280
Bsp143I GATC 1 cut(s) 52
BspLI GGNNCC 1 cut(s) 223
BspOI GCTAGC 1 cut(s) 120
BspPI GGATC 1 cut(s) 47
BspT107I GGYRCC 1 cut(s) 221
BsrDI GCAATG 2 cut(s) 98, 253
BsrFI RCCGGY 1 cut(s) 29
BsrI ACTGG 1 cut(s) 23
BssAI RCCGGY 1 cut(s) 29
BssECI CCNNGG 1 cut(s) 201
BssMI GATC 1 cut(s) 52
BssSI CACGAG 1 cut(s) 301
BssT1I CCWWGG 1 cut(s) 201
Bst2BI CACGAG 1 cut(s) 301
BstBAI YACGTR 1 cut(s) 281
BstC8I GCNNGC 1 cut(s) 118
BstH2I RGCGCY 1 cut(s) 269
BstHHI GCGC 1 cut(s) 268
BstKTI GATC 1 cut(s) 55
BstMBI GATC 1 cut(s) 52
BstMWI GCNNNNNNNGC 1 cut(s) 41
BstSLI GKGCMC 1 cut(s) 280
BstV1I GCAGC 1 cut(s) 28
Cac8I GCNNGC 1 cut(s) 118
CfoI GCGC 1 cut(s) 268
Cfr10I RCCGGY 1 cut(s) 29
Csp6I GTAC 1 cut(s) 222
CspAI ACCGGT 1 cut(s) 29
CviAII CATG 1 cut(s) 38
CviJI RGCY 2 cut(s) 150, 214
CviKI_1 RGCY 2 cut(s) 150, 214
CviQI GTAC 1 cut(s) 222
DpnI GATC 1 cut(s) 54
DpnII GATC 1 cut(s) 52
Eco130I CCWWGG 1 cut(s) 201
EcoT14I CCWWGG 1 cut(s) 201
ErhI CCWWGG 1 cut(s) 201
FaeI CATG 1 cut(s) 41
FaiI YATR 5 cut(s) 39, 49, 81, 86, 153
FatI CATG 1 cut(s) 37
Fnu4HI GCNGC 1 cut(s) 42
Fsp4HI GCNGC 1 cut(s) 42
FspBI CTAG 1 cut(s) 117
GlaI GCGC 1 cut(s) 267
GluI GCNGC 1 cut(s) 42
HaeII RGCGCY 1 cut(s) 269
HapII CCGG 1 cut(s) 30
HhaI GCGC 1 cut(s) 268
Hin1II CATG 1 cut(s) 41
Hin6I GCGC 1 cut(s) 266
HinP1I GCGC 1 cut(s) 266
HpaII CCGG 1 cut(s) 30
HpyCH4IV ACGT 1 cut(s) 280
HpyCH4V TGCA 1 cut(s) 194
HpyF10VI GCNNNNNNNGC 1 cut(s) 41
HpySE526I ACGT 1 cut(s) 280
Hsp92II CATG 1 cut(s) 41
HspAI GCGC 1 cut(s) 266
KpnI GGTACC 1 cut(s) 225
Kzo9I GATC 1 cut(s) 52
LpnPI CCDG 3 cut(s) 4, 43, 126
Lsp1109I GCAGC 1 cut(s) 28
MaeI CTAG 1 cut(s) 117
MaeII ACGT 1 cut(s) 280
MaeIII GTNAC 1 cut(s) 25
MalI GATC 1 cut(s) 54
MboI GATC 1 cut(s) 52
MboII GAAGA 1 cut(s) 16
MfeI CAATTG 1 cut(s) 311
MhlI GDGCHC 2 cut(s) 37, 280
MluCI AATT 3 cut(s) 10, 259, 311
MseI TTAA 3 cut(s) 69, 98, 186
MslI CAYNNNNRTG 1 cut(s) 150
MspI CCGG 1 cut(s) 30
MunI CAATTG 1 cut(s) 311
MwoI GCNNNNNNNGC 1 cut(s) 41
NdeII GATC 1 cut(s) 52
NheI GCTAGC 1 cut(s) 116
NlaIII CATG 1 cut(s) 41
NlaIV GGNNCC 1 cut(s) 223
PinAI ACCGGT 1 cut(s) 29
PkrI GCNGC 1 cut(s) 43
Ppu21I YACGTR 1 cut(s) 281
PspN4I GGNNCC 1 cut(s) 223
RsaI GTAC 1 cut(s) 223
RsaNI GTAC 1 cut(s) 222
RseI CAYNNNNRTG 1 cut(s) 150
SaqAI TTAA 3 cut(s) 69, 98, 186
SatI GCNGC 1 cut(s) 42
Sau3AI GATC 1 cut(s) 52
SduI GDGCHC 2 cut(s) 37, 280
SetI ASST 3 cut(s) 152, 216, 283
SmiMI CAYNNNNRTG 1 cut(s) 150
Sse9I AATT 3 cut(s) 10, 259, 311
SspMI CTAG 1 cut(s) 117
StyI CCWWGG 1 cut(s) 201
TaiI ACGT 1 cut(s) 283
TaqI TCGA 1 cut(s) 162
TasI AATT 3 cut(s) 10, 259, 311
Tru1I TTAA 3 cut(s) 69, 98, 186
Tru9I TTAA 3 cut(s) 69, 98, 186
TseI GCWGC 1 cut(s) 41
TspDTI ATGAA 2 cut(s) 17, 224
XapI RAATTY 1 cut(s) 10
XcmI CCANNNNNNNNNTGG 1 cut(s) 152
XspI CTAG 1 cut(s) 117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.