pycom02g04480

Belongs to the enoyl-CoA hydratase isomerase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
N/A
Physical Location & Seq
Reverse (-)
2917931 .. 2918298
368 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 195 bp
ATGGATGTGAAATACAAGAGCTATCTGGATGAATGGGAATCTCACCCAAATGTGAAGTGTGTTCTTGTTGATAGCCGATCGGCTCGTGCCTTTTGTGGTGGAAAGGATATTAAAGTGGTTGTTGCCAAAATTCAAAAGGACAAAAACACACCTCTTGTGGCGAAGGTTTCTACATTACGCTTTGCTTTGAACTAA

Protein Analysis

65

Amino Acids

7.21

Weight (kDa)

9.47

Isoelectric Point (pI)

14.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ECH_2 PF16113 4 - 50 3e-09 Enoyl-CoA hydratase/isomerase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 129
AgsI TTSAA 2 cut(s) 134, 190
AluBI AGCT 1 cut(s) 21
AluI AGCT 1 cut(s) 21
ApoI RAATTY 1 cut(s) 129
AsuHPI GGTGA 1 cut(s) 35
BauI CACGAG 1 cut(s) 84
BseGI GGATG 2 cut(s) 10, 34
Bsh1285I CGRYCG 1 cut(s) 80
BsiEI CGRYCG 1 cut(s) 80
Bsp143I GATC 1 cut(s) 77
BssMI GATC 1 cut(s) 77
BssSI CACGAG 1 cut(s) 84
Bst2BI CACGAG 1 cut(s) 84
BstF5I GGATG 2 cut(s) 10, 34
BstKTI GATC 1 cut(s) 80
BstMBI GATC 1 cut(s) 77
BstMCI CGRYCG 1 cut(s) 80
BtsCI GGATG 2 cut(s) 10, 34
CviJI RGCY 3 cut(s) 21, 75, 83
CviKI_1 RGCY 3 cut(s) 21, 75, 83
DpnI GATC 1 cut(s) 79
DpnII GATC 1 cut(s) 77
FokI GGATG 2 cut(s) 17, 41
HinfI GANTC 1 cut(s) 38
HphI GGTGA 1 cut(s) 35
Hpy188III TCNNGA 1 cut(s) 26
HpyAV CCTTC 1 cut(s) 157
Kzo9I GATC 1 cut(s) 77
LpnPI CCDG 1 cut(s) 11
MalI GATC 1 cut(s) 79
MboI GATC 1 cut(s) 77
MluCI AATT 1 cut(s) 129
MnlI CCTC 1 cut(s) 162
MseI TTAA 1 cut(s) 111
MslI CAYNNNNRTG 1 cut(s) 48
NdeII GATC 1 cut(s) 77
PfeI GAWTC 1 cut(s) 38
Ple19I CGATCG 1 cut(s) 80
PvuI CGATCG 1 cut(s) 80
RseI CAYNNNNRTG 1 cut(s) 48
SaqAI TTAA 1 cut(s) 111
Sau3AI GATC 1 cut(s) 77
SetI ASST 3 cut(s) 23, 154, 168
SgeI CNNG 6 cut(s) 28, 38, 77, 96, 98, 167
SmiMI CAYNNNNRTG 1 cut(s) 48
Sse9I AATT 1 cut(s) 129
TasI AATT 1 cut(s) 129
TfiI GAWTC 1 cut(s) 38
Tru1I TTAA 1 cut(s) 111
Tru9I TTAA 1 cut(s) 111
TspDTI ATGAA 1 cut(s) 45
XapI RAATTY 1 cut(s) 129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.