pycom02g08430
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
N/A
Physical Location & Seq
Forward (+)
5873706 .. 5875572
1867 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 999 bp
ATGAGAGTTGCAGGTGTTCTTCACATTTTCCAATTTGAAACTAAGCAGGGTGAAGAAATTTGTGTTGCTCTTCAAACACACATAAATGATGTCATGTTGAGGCGCTACTCTAAAGCTCGGCCTGCTGCTAGTGGTTCAACAAACGGAGATCTTTCTAACAATGTTAAGCCCTCTGATGATGAAGTTTATGAAAAACGTATACAGGATTTGTCAAAAGCTGTTGAAGAGTCTCAGACGAATGCTGATCAATTGCTGGAAGAATTGCGTGAAAAGCAAAAACAAGAAGCAAACATGCAAGAAGAAATAGAAAGTTTGAAGCAATCCTTGGCATCTGAGAAGCAAAACCTGACAGAAGTTAGATGTGATCATGATAGGCTTAGATCATTGTGTGATGAAAAGGATATGGCACTTCAGGCTGCACTGCTAGAGAAAAAAAGCTTGGAAGCAAGGCTGCAAAACTTGGGTAATCAATTGGCAGATAAAAATAACAAAACACAGCAAGTTGGTGGAATTAACCACGCATTGCAGAAGCTCGAAGACGAGATAAAGCTTCGTGGTGGGGAATTGTTAGCAAAAGAAAAAACTATAAGGAGACTATCTGATGAAAAAATATCATTGGAGCAAAGACTTTCTGGCCTCGAAAAGACTAAATCTGTCGAGATTGATTCTGTCGGGAAAAAGTTTGAGCAAGAGCGCAGAGCGTTAAAACTTCAAGTGTTTGAACTTGAAAAGAAGCTTGAAGGAGTTAACCAAGAATTAGCAGGTCTTAAGTCAACTCTTGCCACCAAAAACTCTGAGGTTGCTGAATTACAAAGTAGCTTAAAGGAATTGGAGGAACTGAGAGAAATGAAAGAGGACATTGATAGAAAGAACGAGCAAACTGCTGCCATCTTGAGGATGCAAGGAGCTCAGCTAGCTGAGATGGAAGTGCTTTACAAGGAAGAACAACTTTTGAGGAAGCGATATTTTAATACTATAGAAGATGAAAGGCAAGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0000226 GO:0000902 GO:0000904 GO:0001578 GO:0003002 GO:0003674 GO:0003774 GO:0003777 GO:0003779 GO:0003824 GO:0005488 GO:0005509 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005819 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005881 GO:0005938 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007154 GO:0007267 GO:0007275 GO:0007389 GO:0008017 GO:0008092 GO:0008150 GO:0008569 GO:0009524 GO:0009653 GO:0009888 GO:0009987 GO:0010026 GO:0010090 GO:0010091 GO:0015630 GO:0015631 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0030154 GO:0030554 GO:0030863 GO:0030865 GO:0030981 GO:0031122 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032989 GO:0032991 GO:0036094 GO:0042623 GO:0042802 GO:0042803 GO:0043167 GO:0043168 GO:0043169 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043531 GO:0043622 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044464 GO:0044877 GO:0045165 GO:0045168 GO:0046872 GO:0046983 GO:0048468 GO:0048629 GO:0048856 GO:0048869 GO:0051015 GO:0055028 GO:0071840 GO:0071944 GO:0072686 GO:0090558 GO:0090626 GO:0097159 GO:0097367 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099568 GO:1901265 GO:1901363 GO:1990939
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FERM_M FERM_N Kinesin MyTH4

Protein Analysis

333

Amino Acids

38.06

Weight (kDa)

5.31

Isoelectric Point (pI)

55.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2
Acc36I ACCTGC 2 cut(s) 2, 752
AccI GTMKAC 1 cut(s) 199
AcsI RAATTY 1 cut(s) 57
AcuI CTGAAG 1 cut(s) 395
AfiI CCNNNNNNNGG 1 cut(s) 894
AflII CTTAAG 1 cut(s) 767
AgsI TTSAA 9 cut(s) 38, 74, 138, 224, 316, 713, 722, 728, 740
AjuI GAANNNNNNNTTGG 4 cut(s) 308, 340, 422, 454
Alw21I GWGCWC 1 cut(s) 910
Alw26I GTCTC 2 cut(s) 234, 586
AoxI GGCC 2 cut(s) 119, 634
ApeKI GCWGC 4 cut(s) 125, 416, 451, 884
ApoI RAATTY 1 cut(s) 57
AspLEI GCGC 2 cut(s) 105, 696
AsuHPI GGTGA 1 cut(s) 62
AsuNHI GCTAGC 1 cut(s) 913
BanII GRGCYC 1 cut(s) 910
BbsI GAAGAC 1 cut(s) 543
Bbv12I GWGCWC 1 cut(s) 910
BbvI GCAGC 4 cut(s) 112, 403, 438, 871
BccI CCATC 2 cut(s) 896, 916
BcgI CGANNNNNNTGC 2 cut(s) 863, 897
BclI TGATCA 2 cut(s) 244, 364
BcoDI GTCTC 2 cut(s) 234, 586
BfaI CTAG 3 cut(s) 129, 425, 914
BfmI CTRYAG 1 cut(s) 975
BfoI RGCGCY 1 cut(s) 106
BfrI CTTAAG 1 cut(s) 767
BfuAI ACCTGC 2 cut(s) 2, 752
BglII AGATCT 1 cut(s) 148
BisI GCNGC 4 cut(s) 126, 417, 452, 885
BlpI GCTNAGC 1 cut(s) 909
BlsI GCNGC 4 cut(s) 127, 418, 453, 886
BmsI GCATC 2 cut(s) 338, 888
BmtI GCTAGC 1 cut(s) 917
BpiI GAAGAC 1 cut(s) 543
Bpu1102I GCTNAGC 1 cut(s) 909
BpuEI CTTGAG 1 cut(s) 913
BsaJI CCNNGG 1 cut(s) 324
Bsc4I CCNNNNNNNGG 1 cut(s) 894
Bse3DI GCAATG 1 cut(s) 521
BseDI CCNNGG 1 cut(s) 324
BseGI GGATG 1 cut(s) 903
BseLI CCNNNNNNNGG 1 cut(s) 894
BseMI GCAATG 1 cut(s) 521
BseMII CTCAG 6 cut(s) 245, 324, 786, 830, 909, 923
BseXI GCAGC 4 cut(s) 112, 403, 438, 871
BsgI GTGCAG 1 cut(s) 402
BshFI GGCC 2 cut(s) 121, 636
BsiHKAI GWGCWC 1 cut(s) 910
BslI CCNNNNNNNGG 1 cut(s) 894
BsmAI GTCTC 2 cut(s) 234, 586
BsmI GAATGC 1 cut(s) 244
BsnI GGCC 2 cut(s) 121, 636
Bsp1286I GDGCHC 1 cut(s) 910
Bsp143I GATC 4 cut(s) 148, 244, 364, 380
Bsp1720I GCTNAGC 1 cut(s) 909
BspANI GGCC 2 cut(s) 121, 636
BspCNI CTCAG 6 cut(s) 244, 325, 787, 831, 910, 922
BspHI TCATGA 1 cut(s) 367
BspMI ACCTGC 2 cut(s) 2, 752
BspOI GCTAGC 1 cut(s) 917
BspQI GCTCTTC 1 cut(s) 75
BspTI CTTAAG 1 cut(s) 767
BsrDI GCAATG 1 cut(s) 521
BssECI CCNNGG 1 cut(s) 324
BssMI GATC 4 cut(s) 148, 244, 364, 380
BssNAI GTATAC 1 cut(s) 200
BssT1I CCWWGG 1 cut(s) 324
Bst1107I GTATAC 1 cut(s) 200
Bst6I CTCTTC 2 cut(s) 75, 219
BstAFI CTTAAG 1 cut(s) 767
BstC8I GCNNGC 2 cut(s) 123, 915
BstDEI CTNAG 8 cut(s) 42, 231, 333, 377, 795, 839, 909, 918
BstF5I GGATG 1 cut(s) 903
BstH2I RGCGCY 1 cut(s) 106
BstHHI GCGC 2 cut(s) 105, 696
BstKTI GATC 4 cut(s) 151, 247, 367, 383
BstMAI GTCTC 2 cut(s) 234, 586
BstMBI GATC 4 cut(s) 148, 244, 364, 380
BstMWI GCNNNNNNNGC 4 cut(s) 122, 271, 413, 914
BstNSI RCATGY 1 cut(s) 295
BstSFI CTRYAG 1 cut(s) 975
BstV1I GCAGC 4 cut(s) 112, 403, 438, 871
BstV2I GAAGAC 1 cut(s) 543
BstX2I RGATCY 1 cut(s) 148
BstYI RGATCY 1 cut(s) 148
BstZ17I GTATAC 1 cut(s) 200
BsuRI GGCC 2 cut(s) 121, 636
BtsCI GGATG 1 cut(s) 903
BtsI GCAGTG 1 cut(s) 419
BtsIMutI CAGTG 1 cut(s) 419
BveI ACCTGC 2 cut(s) 2, 752
Cac8I GCNNGC 2 cut(s) 123, 915
CciI TCATGA 1 cut(s) 367
CfoI GCGC 2 cut(s) 105, 696
CviAII CATG 3 cut(s) 94, 292, 368
DdeI CTNAG 8 cut(s) 42, 231, 333, 377, 795, 839, 909, 918
DpnI GATC 4 cut(s) 150, 246, 366, 382
DpnII GATC 4 cut(s) 148, 244, 364, 380
Eam1104I CTCTTC 2 cut(s) 75, 219
EarI CTCTTC 2 cut(s) 75, 219
Ecl136II GAGCTC 1 cut(s) 908
Eco130I CCWWGG 1 cut(s) 324
Eco24I GRGCYC 1 cut(s) 910
Eco53kI GAGCTC 1 cut(s) 908
Eco57I CTGAAG 1 cut(s) 395
EcoICRI GAGCTC 1 cut(s) 908
EcoT14I CCWWGG 1 cut(s) 324
EcoT38I GRGCYC 1 cut(s) 910
ErhI CCWWGG 1 cut(s) 324
FaeI CATG 3 cut(s) 97, 295, 371
FaiI YATR 9 cut(s) 83, 95, 189, 200, 293, 369, 404, 587, 977
FalI AAGNNNNNCTT 4 cut(s) 308, 340, 933, 965
FatI CATG 3 cut(s) 93, 291, 367
FbaI TGATCA 2 cut(s) 244, 364
FblI GTMKAC 1 cut(s) 199
Fnu4HI GCNGC 4 cut(s) 126, 417, 452, 885
FokI GGATG 1 cut(s) 910
FriOI GRGCYC 1 cut(s) 910
Fsp4HI GCNGC 4 cut(s) 126, 417, 452, 885
FspBI CTAG 3 cut(s) 129, 425, 914
GlaI GCGC 2 cut(s) 104, 695
GluI GCNGC 4 cut(s) 126, 417, 452, 885
HaeII RGCGCY 1 cut(s) 106
HaeIII GGCC 2 cut(s) 121, 636
HhaI GCGC 2 cut(s) 105, 696
Hin1II CATG 3 cut(s) 97, 295, 371
Hin6I GCGC 2 cut(s) 103, 694
HinP1I GCGC 2 cut(s) 103, 694
HincII GTYRAC 2 cut(s) 748, 774
HindII GTYRAC 2 cut(s) 748, 774
HindIII AAGCTT 3 cut(s) 436, 548, 734
HinfI GANTC 2 cut(s) 227, 665
HpaI GTTAAC 1 cut(s) 748
HphI GGTGA 1 cut(s) 62
Hpy166II GTNNAC 3 cut(s) 200, 748, 774
Hpy188I TCNGA 5 cut(s) 175, 234, 334, 601, 796
Hpy188III TCNNGA 4 cut(s) 368, 658, 673, 892
Hpy8I GTNNAC 3 cut(s) 200, 748, 774
HpyAV CCTTC 1 cut(s) 734
HpyCH4IV ACGT 1 cut(s) 196
HpyCH4V TGCA 6 cut(s) 11, 295, 419, 454, 526, 901
HpyF10VI GCNNNNNNNGC 4 cut(s) 122, 271, 413, 914
HpyF3I CTNAG 8 cut(s) 42, 231, 333, 377, 795, 839, 909, 918
HpySE526I ACGT 1 cut(s) 196
Hsp92II CATG 3 cut(s) 97, 295, 371
HspAI GCGC 2 cut(s) 103, 694
Ksp22I TGATCA 2 cut(s) 244, 364
KspAI GTTAAC 1 cut(s) 748
Kzo9I GATC 4 cut(s) 148, 244, 364, 380
LguI GCTCTTC 1 cut(s) 75
LmnI GCTCC 2 cut(s) 619, 905
LpnPI CCDG 8 cut(s) 32, 135, 188, 239, 359, 398, 618, 747
Lsp1109I GCAGC 4 cut(s) 112, 403, 438, 871
LweI GCATC 2 cut(s) 338, 888
MaeI CTAG 3 cut(s) 129, 425, 914
MaeII ACGT 1 cut(s) 196
MalI GATC 4 cut(s) 150, 246, 366, 382
MboI GATC 4 cut(s) 148, 244, 364, 380
MboII GAAGA 9 cut(s) 11, 62, 65, 236, 269, 311, 548, 953, 992
MfeI CAATTG 2 cut(s) 248, 470
MflI RGATCY 1 cut(s) 148
MhlI GDGCHC 1 cut(s) 910
MlyI GAGTC 1 cut(s) 236
MnlI CCTC 8 cut(s) 93, 181, 647, 790, 826, 847, 888, 948
MseI TTAA 7 cut(s) 165, 513, 704, 747, 768, 821, 969
MslI CAYNNNNRTG 1 cut(s) 84
MspCI CTTAAG 1 cut(s) 767
MunI CAATTG 2 cut(s) 248, 470
Mva1269I GAATGC 1 cut(s) 244
MwoI GCNNNNNNNGC 4 cut(s) 122, 271, 413, 914
NdeII GATC 4 cut(s) 148, 244, 364, 380
NheI GCTAGC 1 cut(s) 913
NlaIII CATG 3 cut(s) 97, 295, 371
NmeAIII GCCGAG 1 cut(s) 97
NspI RCATGY 1 cut(s) 295
PagI TCATGA 1 cut(s) 367
PaqCI CACCTGC 1 cut(s) 2
PciSI GCTCTTC 1 cut(s) 75
PctI GAATGC 1 cut(s) 244
PfeI GAWTC 1 cut(s) 665
PkrI GCNGC 4 cut(s) 127, 418, 453, 886
PleI GAGTC 1 cut(s) 235
PpsI GAGTC 1 cut(s) 235
Psp124BI GAGCTC 1 cut(s) 910
PsuI RGATCY 1 cut(s) 148
RseI CAYNNNNRTG 1 cut(s) 84
SacI GAGCTC 1 cut(s) 910
SapI GCTCTTC 1 cut(s) 75
SaqAI TTAA 7 cut(s) 165, 513, 704, 747, 768, 821, 969
SatI GCNGC 4 cut(s) 126, 417, 452, 885
Sau3AI GATC 4 cut(s) 148, 244, 364, 380
SchI GAGTC 1 cut(s) 236
SduI GDGCHC 1 cut(s) 910
SfaNI GCATC 2 cut(s) 338, 888
SfcI CTRYAG 1 cut(s) 975
SmiMI CAYNNNNRTG 1 cut(s) 84
SmlI CTYRAG 2 cut(s) 767, 892
SmoI CTYRAG 2 cut(s) 767, 892
SspMI CTAG 3 cut(s) 129, 425, 914
SstI GAGCTC 1 cut(s) 910
StyI CCWWGG 1 cut(s) 324
TaiI ACGT 1 cut(s) 199
TaqI TCGA 3 cut(s) 534, 639, 657
TfiI GAWTC 1 cut(s) 665
Tru1I TTAA 7 cut(s) 165, 513, 704, 747, 768, 821, 969
Tru9I TTAA 7 cut(s) 165, 513, 704, 747, 768, 821, 969
TscAI CASTG 1 cut(s) 426
TseI GCWGC 4 cut(s) 125, 416, 451, 884
TspDTI ATGAA 6 cut(s) 195, 204, 408, 618, 863, 999
TspGWI ACGGA 1 cut(s) 159
TspRI CASTG 1 cut(s) 426
Vha464I CTTAAG 1 cut(s) 767
XapI RAATTY 1 cut(s) 57
XceI RCATGY 1 cut(s) 295
XmiI GTMKAC 1 cut(s) 199
XspI CTAG 3 cut(s) 129, 425, 914
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.