pycom02g09190

phosphatase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
N/A
Physical Location & Seq
Reverse (-)
6324838 .. 6325644
807 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 390 bp
ATGTCTGCGGTGTGGGCTAATCATGGGGATGATGTAAGCATTCAGTATTCTGGAACTCCTGCTTTGAAGGGGGATTTTGTAAGATGCGGACAGCGGACAATGCAAGGGATCGCTAAGGATGGAGTCAGTGCTCTCCTACGTTATTACTATAATAACTTTTGCGATGGAACAAAACAGGTTGGTACACAAGTGTTGGATCTCTTTGATGCAATTGACCTTCTCCAAGGACATTACATCGTCTCGGTCAGCAGAGATATGACACCGTCATCACAAAAAGGAGGACTTGAGGCTGTTGCTTCATTTCCACTGGCTTTGTTTTTCGTTTTGATGGGGTTCTTTTTTGCGACATTGTCATTGAGGCAAGGTAAATATAAACATGTCATGTTGTGA

Protein Analysis

130

Amino Acids

14.21

Weight (kDa)

7.79

Isoelectric Point (pI)

25.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 8, 87, 94
AclWI GGATC 2 cut(s) 116, 204
AfaI GTAC 1 cut(s) 184
AflIII ACRYGT 1 cut(s) 376
AgsI TTSAA 1 cut(s) 67
Alw21I GWGCWC 1 cut(s) 133
Alw26I GTCTC 1 cut(s) 244
AlwI GGATC 2 cut(s) 116, 204
BaeI ACNNNNGTAYC 2 cut(s) 174, 207
Bbv12I GWGCWC 1 cut(s) 133
BccI CCATC 3 cut(s) 113, 158, 322
BcoDI GTCTC 1 cut(s) 244
BmsI GCATC 2 cut(s) 74, 196
Bpu10I CCTNAGC 1 cut(s) 114
BpuEI CTTGAG 1 cut(s) 305
BsaJI CCNNGG 1 cut(s) 223
Bse1I ACTGG 1 cut(s) 312
BseDI CCNNGG 1 cut(s) 223
BseGI GGATG 2 cut(s) 34, 124
BseNI ACTGG 1 cut(s) 312
BsiHKAI GWGCWC 1 cut(s) 133
BsmAI GTCTC 1 cut(s) 244
BsmBI CGTCTC 1 cut(s) 244
BsmI GAATGC 1 cut(s) 39
Bsp1286I GDGCHC 1 cut(s) 133
Bsp143I GATC 2 cut(s) 108, 196
BspACI CCGC 3 cut(s) 8, 87, 94
BspPI GGATC 2 cut(s) 116, 204
BsrI ACTGG 1 cut(s) 312
BssECI CCNNGG 1 cut(s) 223
BssMI GATC 2 cut(s) 108, 196
BssT1I CCWWGG 1 cut(s) 223
Bst4CI ACNGT 1 cut(s) 264
BstDEI CTNAG 1 cut(s) 114
BstF5I GGATG 2 cut(s) 34, 124
BstKTI GATC 2 cut(s) 111, 199
BstMAI GTCTC 1 cut(s) 244
BstMBI GATC 2 cut(s) 108, 196
BstMWI GCNNNNNNNGC 2 cut(s) 14, 100
BstNSI RCATGY 1 cut(s) 380
BstX2I RGATCY 1 cut(s) 196
BstYI RGATCY 1 cut(s) 196
BtgZI GCGATG 1 cut(s) 177
BtsCI GGATG 2 cut(s) 34, 124
BtsIMutI CAGTG 2 cut(s) 133, 305
Csp6I GTAC 1 cut(s) 183
CspCI CAANNNNNGTGG 2 cut(s) 294, 329
CviAII CATG 3 cut(s) 23, 377, 382
CviJI RGCY 3 cut(s) 17, 290, 311
CviKI_1 RGCY 3 cut(s) 17, 290, 311
CviQI GTAC 1 cut(s) 183
DdeI CTNAG 1 cut(s) 114
DpnI GATC 2 cut(s) 110, 198
DpnII GATC 2 cut(s) 108, 196
Eco130I CCWWGG 1 cut(s) 223
EcoT14I CCWWGG 1 cut(s) 223
ErhI CCWWGG 1 cut(s) 223
Esp3I CGTCTC 1 cut(s) 244
FaeI CATG 3 cut(s) 26, 380, 385
FaiI YATR 6 cut(s) 24, 150, 257, 372, 378, 383
FalI AAGNNNNNCTT 2 cut(s) 267, 299
FatI CATG 3 cut(s) 22, 376, 381
FokI GGATG 2 cut(s) 41, 131
Hin1II CATG 3 cut(s) 26, 380, 385
HinfI GANTC 1 cut(s) 123
Hpy166II GTNNAC 1 cut(s) 185
Hpy188III TCNNGA 1 cut(s) 51
Hpy8I GTNNAC 1 cut(s) 185
HpyAV CCTTC 2 cut(s) 61, 227
HpyCH4III ACNGT 1 cut(s) 264
HpyCH4IV ACGT 1 cut(s) 139
HpyCH4V TGCA 2 cut(s) 103, 209
HpyF10VI GCNNNNNNNGC 2 cut(s) 14, 100
HpyF3I CTNAG 1 cut(s) 114
HpySE526I ACGT 1 cut(s) 139
Hsp92II CATG 3 cut(s) 26, 380, 385
Kzo9I GATC 2 cut(s) 108, 196
LpnPI CCDG 4 cut(s) 36, 72, 161, 293
LweI GCATC 2 cut(s) 74, 196
MaeII ACGT 1 cut(s) 139
MalI GATC 2 cut(s) 110, 198
MboI GATC 2 cut(s) 108, 196
MfeI CAATTG 1 cut(s) 210
MflI RGATCY 1 cut(s) 196
MhlI GDGCHC 1 cut(s) 133
MluCI AATT 1 cut(s) 210
MlyI GAGTC 1 cut(s) 132
MmeI TCCRAC 1 cut(s) 174
MnlI CCTC 3 cut(s) 272, 280, 351
MslI CAYNNNNRTG 1 cut(s) 27
MspA1I CMGCKG 1 cut(s) 94
MunI CAATTG 1 cut(s) 210
Mva1269I GAATGC 1 cut(s) 39
MwoI GCNNNNNNNGC 2 cut(s) 14, 100
NdeII GATC 2 cut(s) 108, 196
NlaIII CATG 3 cut(s) 26, 380, 385
NspI RCATGY 1 cut(s) 380
PciI ACATGT 1 cut(s) 376
PctI GAATGC 1 cut(s) 39
PflFI GACNNNGTC 2 cut(s) 262, 349
PleI GAGTC 1 cut(s) 131
PpsI GAGTC 1 cut(s) 131
PscI ACATGT 1 cut(s) 376
PsuI RGATCY 1 cut(s) 196
PsyI GACNNNGTC 2 cut(s) 262, 349
RsaI GTAC 1 cut(s) 184
RsaNI GTAC 1 cut(s) 183
RseI CAYNNNNRTG 1 cut(s) 27
Sau3AI GATC 2 cut(s) 108, 196
SchI GAGTC 1 cut(s) 132
SduI GDGCHC 1 cut(s) 133
SetI ASST 4 cut(s) 142, 180, 219, 367
SfaNI GCATC 2 cut(s) 74, 196
SmiMI CAYNNNNRTG 1 cut(s) 27
SmlI CTYRAG 1 cut(s) 284
SmoI CTYRAG 1 cut(s) 284
Sse9I AATT 1 cut(s) 210
SsiI CCGC 3 cut(s) 8, 87, 94
StyI CCWWGG 1 cut(s) 223
TaaI ACNGT 1 cut(s) 264
TaiI ACGT 1 cut(s) 142
TaqII GACCGA 1 cut(s) 232
TasI AATT 1 cut(s) 210
TscAI CASTG 2 cut(s) 133, 312
TspDTI ATGAA 1 cut(s) 288
TspRI CASTG 2 cut(s) 133, 312
Tth111I GACNNNGTC 2 cut(s) 262, 349
XceI RCATGY 1 cut(s) 380
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.