pycom02g12200

Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser Thr consensus motif in nascent polypeptide chains

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
N/A
Physical Location & Seq
Forward (+)
8771205 .. 8771770
566 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 261 bp
ATGAATTATATATATATATATCACCTATCTAGACACAATAAACTTGGAGAAACTAATGAACCTGCAATCTATAGGATTAACGATGACCTGGAGTATTATATTGAGATAATGAGTGATCTCAAAAGAGCTAGGAACCATACGTATGTCGCAAATGGTGTCCGAGTGCAGTTCTCCGTGATTAGCCCTGATGTGATAATAACTCTAGAGACAGATACTGTCCATTGCTTGTCGTGGGAGGTTGTTACGGTGCTCAACTGCTAA

Protein Analysis

87

Amino Acids

10.09

Weight (kDa)

5.39

Isoelectric Point (pI)

38.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OST48_MD PF23358 12 - 71 4e-06 OST48 middle domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 70
AjnI CCWGG 1 cut(s) 87
AluBI AGCT 1 cut(s) 128
AluI AGCT 1 cut(s) 128
Alw21I GWGCWC 1 cut(s) 252
Alw26I GTCTC 1 cut(s) 200
AlwNI CAGNNNCTG 1 cut(s) 215
AsuHPI GGTGA 1 cut(s) 14
Bbv12I GWGCWC 1 cut(s) 252
BciT130I CCWGG 1 cut(s) 89
BcoDI GTCTC 1 cut(s) 200
BfaI CTAG 3 cut(s) 30, 129, 203
BfmI CTRYAG 1 cut(s) 70
BfuAI ACCTGC 1 cut(s) 70
Bme1390I CCNGG 1 cut(s) 89
BmiI GGNNCC 1 cut(s) 134
BmrFI CCNGG 1 cut(s) 89
BpmI CTGGAG 1 cut(s) 110
BsaAI YACGTR 1 cut(s) 141
Bse3DI GCAATG 1 cut(s) 220
BseBI CCWGG 1 cut(s) 89
BseMI GCAATG 1 cut(s) 220
BsgI GTGCAG 1 cut(s) 185
BsiHKAI GWGCWC 1 cut(s) 252
BsmAI GTCTC 1 cut(s) 200
Bsp1286I GDGCHC 1 cut(s) 252
Bsp143I GATC 1 cut(s) 115
BspLI GGNNCC 1 cut(s) 134
BspMI ACCTGC 1 cut(s) 70
BsrDI GCAATG 1 cut(s) 220
BssMI GATC 1 cut(s) 115
Bst2UI CCWGG 1 cut(s) 89
Bst4CI ACNGT 2 cut(s) 217, 247
BstBAI YACGTR 1 cut(s) 141
BstKTI GATC 1 cut(s) 118
BstMAI GTCTC 1 cut(s) 200
BstMBI GATC 1 cut(s) 115
BstNI CCWGG 1 cut(s) 89
BstSCI CCNGG 1 cut(s) 87
BstSFI CTRYAG 1 cut(s) 70
BstSNI TACGTA 1 cut(s) 141
BveI ACCTGC 1 cut(s) 70
CaiI CAGNNNCTG 1 cut(s) 215
CviJI RGCY 2 cut(s) 128, 183
CviKI_1 RGCY 2 cut(s) 128, 183
DpnI GATC 1 cut(s) 117
DpnII GATC 1 cut(s) 115
Eco105I TACGTA 1 cut(s) 141
EcoRII CCWGG 1 cut(s) 87
FspBI CTAG 3 cut(s) 30, 129, 203
GsuI CTGGAG 1 cut(s) 110
HphI GGTGA 1 cut(s) 14
Hpy188I TCNGA 1 cut(s) 161
Hpy188III TCNNGA 2 cut(s) 30, 203
HpyCH4III ACNGT 2 cut(s) 217, 247
HpyCH4IV ACGT 1 cut(s) 140
HpyCH4V TGCA 2 cut(s) 65, 166
HpySE526I ACGT 1 cut(s) 140
Kzo9I GATC 1 cut(s) 115
LpnPI CCDG 4 cut(s) 74, 75, 101, 198
MaeI CTAG 3 cut(s) 30, 129, 203
MaeII ACGT 1 cut(s) 140
MaeIII GTNAC 1 cut(s) 241
MalI GATC 1 cut(s) 117
MboI GATC 1 cut(s) 115
MhlI GDGCHC 1 cut(s) 252
MluCI AATT 1 cut(s) 4
MnlI CCTC 1 cut(s) 229
MseI TTAA 1 cut(s) 78
MslI CAYNNNNRTG 1 cut(s) 141
MspR9I CCNGG 1 cut(s) 89
MvaI CCWGG 1 cut(s) 89
NdeII GATC 1 cut(s) 115
NlaIV GGNNCC 1 cut(s) 134
Ppu21I YACGTR 1 cut(s) 141
Psp6I CCWGG 1 cut(s) 87
PspGI CCWGG 1 cut(s) 87
PspN4I GGNNCC 1 cut(s) 134
PstNI CAGNNNCTG 1 cut(s) 215
RseI CAYNNNNRTG 1 cut(s) 141
SaqAI TTAA 1 cut(s) 78
Sau3AI GATC 1 cut(s) 115
ScrFI CCNGG 1 cut(s) 89
SduI GDGCHC 1 cut(s) 252
SetI ASST 6 cut(s) 27, 64, 90, 130, 143, 240
SfcI CTRYAG 1 cut(s) 70
SmiMI CAYNNNNRTG 1 cut(s) 141
SnaBI TACGTA 1 cut(s) 141
Sse9I AATT 1 cut(s) 4
SspMI CTAG 3 cut(s) 30, 129, 203
StyD4I CCNGG 1 cut(s) 87
TaaI ACNGT 2 cut(s) 217, 247
TaiI ACGT 1 cut(s) 143
TasI AATT 1 cut(s) 4
Tru1I TTAA 1 cut(s) 78
Tru9I TTAA 1 cut(s) 78
TspDTI ATGAA 2 cut(s) 17, 72
TspGWI ACGGA 1 cut(s) 163
XbaI TCTAGA 2 cut(s) 29, 202
XspI CTAG 3 cut(s) 30, 129, 203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.