pycom02g13180

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
N/A
Physical Location & Seq
Forward (+)
9711537 .. 9712681
1145 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 249 bp
ATGGTCAATGTGATTAGATCGTTTAGTTACACTTCTTATTGCAGACAAAACCATTGGGATGACAACCTTGCATTTACGTTCTTTCGAAGCAATCCATATGTCCATATATTGAACGAGCAAGCCACTTTCTTGGAGGATTTGAAGGATCACGATTTTGTTAATGCTACTTGCTTCAAGACCACCGTGCAAAAGGTAATTTTGCATTCGTTTTTAGTTCTTTGGAATGTCAAAGAGTTGTCGCAGGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

83

Amino Acids

9.73

Weight (kDa)

6.38

Isoelectric Point (pI)

40.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 153
AgsI TTSAA 3 cut(s) 112, 142, 175
AlwI GGATC 1 cut(s) 153
AsuII TTCGAA 1 cut(s) 85
Bpu14I TTCGAA 1 cut(s) 85
BseGI GGATG 1 cut(s) 64
BsmI GAATGC 1 cut(s) 202
Bsp119I TTCGAA 1 cut(s) 85
Bsp143I GATC 2 cut(s) 17, 145
BspPI GGATC 1 cut(s) 153
BspT104I TTCGAA 1 cut(s) 85
BssMI GATC 2 cut(s) 17, 145
Bst4CI ACNGT 1 cut(s) 184
BstBI TTCGAA 1 cut(s) 85
BstC8I GCNNGC 1 cut(s) 120
BstF5I GGATG 1 cut(s) 64
BstKTI GATC 2 cut(s) 20, 148
BstMBI GATC 2 cut(s) 17, 145
BstXI CCANNNNNNTGG 1 cut(s) 130
BtsCI GGATG 1 cut(s) 64
Cac8I GCNNGC 1 cut(s) 120
CviJI RGCY 1 cut(s) 122
CviKI_1 RGCY 1 cut(s) 122
DpnI GATC 2 cut(s) 19, 147
DpnII GATC 2 cut(s) 17, 145
FaiI YATR 4 cut(s) 97, 99, 105, 107
FauNDI CATATG 1 cut(s) 97
FokI GGATG 1 cut(s) 71
Hpy188III TCNNGA 2 cut(s) 149, 175
HpyAV CCTTC 1 cut(s) 136
HpyCH4III ACNGT 1 cut(s) 184
HpyCH4IV ACGT 1 cut(s) 77
HpyCH4V TGCA 4 cut(s) 42, 71, 187, 202
HpySE526I ACGT 1 cut(s) 77
Kzo9I GATC 2 cut(s) 17, 145
LpnPI CCDG 1 cut(s) 227
MaeII ACGT 1 cut(s) 77
MaeIII GTNAC 1 cut(s) 26
MalI GATC 2 cut(s) 19, 147
MboI GATC 2 cut(s) 17, 145
MluCI AATT 1 cut(s) 195
MnlI CCTC 1 cut(s) 127
MseI TTAA 1 cut(s) 159
MslI CAYNNNNRTG 1 cut(s) 57
Mva1269I GAATGC 1 cut(s) 202
NdeI CATATG 1 cut(s) 97
NdeII GATC 2 cut(s) 17, 145
NspV TTCGAA 1 cut(s) 85
PctI GAATGC 1 cut(s) 202
RseI CAYNNNNRTG 1 cut(s) 57
SaqAI TTAA 1 cut(s) 159
Sau3AI GATC 2 cut(s) 17, 145
SetI ASST 3 cut(s) 69, 80, 195
SfuI TTCGAA 1 cut(s) 85
SgeI CNNG 8 cut(s) 80, 127, 131, 142, 161, 180, 187, 196
SmiMI CAYNNNNRTG 1 cut(s) 57
Sse9I AATT 1 cut(s) 195
TaaI ACNGT 1 cut(s) 184
TaiI ACGT 1 cut(s) 80
TaqI TCGA 1 cut(s) 85
TasI AATT 1 cut(s) 195
Tru1I TTAA 1 cut(s) 159
Tru9I TTAA 1 cut(s) 159
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.