pycom02g13530
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
N/A
Physical Location & Seq
Forward (+)
10035323 .. 10035568
246 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 246 bp
ATGATTTGCTTTCGGCTTTTGGTTTTCTGTCATTTATTGCTGGGTTTATGGAATTGTGAAGTTGGTGCAAGGTGGTTGTCAAGTAGATCATTTACAACGTTTTCTGACCGACCGTTTAGAACAGTCATGCAAACCTCCATGTCCATCGAAATATTGAGGACCCGTGTAAAAGGTTGCTGGGTACAACTTAGAATGGGCAGTGGACCTGAAGTTACTATCAAACCTTCGGAATCTGCAAACATATGA

Protein Analysis

82

Amino Acids

9.3

Weight (kDa)

9.68

Isoelectric Point (pI)

71.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclI AACGTT 1 cut(s) 98
AcuI CTGAAG 1 cut(s) 228
AfaI GTAC 1 cut(s) 183
AspS9I GGNCC 2 cut(s) 159, 203
AvaII GGWCC 2 cut(s) 159, 203
BccI CCATC 1 cut(s) 152
Bme18I GGWCC 2 cut(s) 159, 203
BmgT120I GGNCC 2 cut(s) 159, 203
BmiI GGNNCC 1 cut(s) 161
BseYI CCCAGC 2 cut(s) 40, 177
Bsh1285I CGRYCG 1 cut(s) 113
BsiEI CGRYCG 1 cut(s) 113
Bsp143I GATC 1 cut(s) 86
BspLI GGNNCC 1 cut(s) 161
BssMI GATC 1 cut(s) 86
Bst4CI ACNGT 2 cut(s) 114, 124
BstDEI CTNAG 1 cut(s) 188
BstKTI GATC 1 cut(s) 89
BstMBI GATC 1 cut(s) 86
BstMCI CGRYCG 1 cut(s) 113
BtsI GCAGTG 1 cut(s) 205
BtsIMutI CAGTG 1 cut(s) 205
Cfr13I GGNCC 2 cut(s) 159, 203
Csp6I GTAC 1 cut(s) 182
CviAII CATG 2 cut(s) 127, 139
CviJI RGCY 1 cut(s) 16
CviKI_1 RGCY 1 cut(s) 16
CviQI GTAC 1 cut(s) 182
DdeI CTNAG 1 cut(s) 188
DpnI GATC 1 cut(s) 88
DpnII GATC 1 cut(s) 86
Eco47I GGWCC 2 cut(s) 159, 203
Eco57I CTGAAG 1 cut(s) 228
EcoO109I RGGNCCY 1 cut(s) 159
FaeI CATG 2 cut(s) 130, 142
FaiI YATR 5 cut(s) 49, 128, 140, 242, 244
FatI CATG 2 cut(s) 126, 138
FauNDI CATATG 1 cut(s) 242
GsaI CCCAGC 2 cut(s) 44, 181
Hin1II CATG 2 cut(s) 130, 142
HinfI GANTC 1 cut(s) 230
Hpy166II GTNNAC 1 cut(s) 203
Hpy188I TCNGA 2 cut(s) 106, 229
Hpy8I GTNNAC 1 cut(s) 203
HpyAV CCTTC 1 cut(s) 234
HpyCH4III ACNGT 2 cut(s) 114, 124
HpyCH4IV ACGT 1 cut(s) 98
HpyCH4V TGCA 3 cut(s) 68, 130, 236
HpyF3I CTNAG 1 cut(s) 188
HpySE526I ACGT 1 cut(s) 98
Hsp92II CATG 2 cut(s) 130, 142
Kzo9I GATC 1 cut(s) 86
LpnPI CCDG 3 cut(s) 26, 163, 219
MaeII ACGT 1 cut(s) 98
MaeIII GTNAC 1 cut(s) 211
MalI GATC 1 cut(s) 88
MboI GATC 1 cut(s) 86
MluCI AATT 1 cut(s) 52
MnlI CCTC 2 cut(s) 145, 150
NdeI CATATG 1 cut(s) 242
NdeII GATC 1 cut(s) 86
NlaIII CATG 2 cut(s) 130, 142
NlaIV GGNNCC 1 cut(s) 161
PfeI GAWTC 1 cut(s) 230
PpuMI RGGWCCY 1 cut(s) 159
Psp1406I AACGTT 1 cut(s) 98
Psp5II RGGWCCY 1 cut(s) 159
PspFI CCCAGC 2 cut(s) 40, 177
PspN4I GGNNCC 1 cut(s) 161
PspPI GGNCC 2 cut(s) 159, 203
PspPPI RGGWCCY 1 cut(s) 159
RsaI GTAC 1 cut(s) 183
RsaNI GTAC 1 cut(s) 182
Sau3AI GATC 1 cut(s) 86
Sau96I GGNCC 2 cut(s) 159, 203
SetI ASST 6 cut(s) 74, 101, 137, 175, 208, 226
SgeI CNNG 9 cut(s) 53, 81, 93, 139, 151, 174, 176, 190, 218
SinI GGWCC 2 cut(s) 159, 203
Sse9I AATT 1 cut(s) 52
SspI AATATT 1 cut(s) 153
TaaI ACNGT 2 cut(s) 114, 124
TaiI ACGT 1 cut(s) 101
TaqI TCGA 1 cut(s) 147
TaqII GACCGA 1 cut(s) 123
TasI AATT 1 cut(s) 52
TfiI GAWTC 1 cut(s) 230
TscAI CASTG 1 cut(s) 205
TspRI CASTG 1 cut(s) 205
VpaK11BI GGWCC 2 cut(s) 159, 203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.