pycom02g15220

Amino-acid acetyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
N/A
Physical Location & Seq
Reverse (-)
11885610 .. 11885968
359 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 318 bp
ATGGCTACTTTAAGATCAATGCCCTGGAATCAAACGTACCGCGGCCATGACCACACTTGGCCTTCATGTCCCTGTGAAGTACCCAAAAATTTCAGTTACGCGTTCGGTTTGATGAAGGCGAAAAGTCGTCGGAGAGTTGGGGGTGTTGCGTTGGCTCCTAAATGGCAGCTGCTGGAAATGGGAATTAAAAGAAAGGGAATTAGGGTAACGGTGGCGAAAGGGTACGATGGTCGTGACCCTGCAGCGGGTGTCAATATTCCGGCGGAGGAAGATGAGAAGTTTGTGGAGCACTACATTTGTTGTGGTCATAGCCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00220 ko01100 ko01110 ko01130 ko01210 ko01230 map00220 map01100 map01110 map01130 map01210 map01230
Pfam Domains
Protein Families
AA_kinase Acetyltransf_1

Protein Analysis

106

Amino Acids

11.82

Weight (kDa)

9.35

Isoelectric Point (pI)

56.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 42, 101
AciI CCGC 4 cut(s) 40, 42, 245, 263
AcoI YGGCCR 1 cut(s) 43
AcsI RAATTY 1 cut(s) 88
AfaI GTAC 3 cut(s) 38, 81, 224
AfiI CCNNNNNNNGG 2 cut(s) 244, 245
AflIII ACRYGT 1 cut(s) 99
AjnI CCWGG 1 cut(s) 23
AluBI AGCT 1 cut(s) 169
AluI AGCT 1 cut(s) 169
Alw21I GWGCWC 1 cut(s) 291
AlwNI CAGNNNCTG 1 cut(s) 172
AoxI GGCC 2 cut(s) 43, 59
ApeKI GCWGC 3 cut(s) 166, 169, 242
ApoI RAATTY 1 cut(s) 88
BaeI ACNNNNGTAYC 2 cut(s) 214, 247
Bbv12I GWGCWC 1 cut(s) 291
BbvI GCAGC 3 cut(s) 156, 178, 254
BccI CCATC 1 cut(s) 221
BciT130I CCWGG 1 cut(s) 25
BfmI CTRYAG 1 cut(s) 240
BisI GCNGC 4 cut(s) 43, 167, 170, 243
BlsI GCNGC 4 cut(s) 44, 168, 171, 244
Bme1390I CCNGG 1 cut(s) 25
BmiI GGNNCC 1 cut(s) 156
BmrFI CCNGG 1 cut(s) 25
BsaJI CCNNGG 2 cut(s) 23, 40
Bsc4I CCNNNNNNNGG 2 cut(s) 244, 245
BseBI CCWGG 1 cut(s) 25
BseDI CCNNGG 2 cut(s) 23, 40
BseLI CCNNNNNNNGG 2 cut(s) 244, 245
BseXI GCAGC 3 cut(s) 156, 178, 254
Bsh1236I CGCG 2 cut(s) 42, 101
BshFI GGCC 2 cut(s) 45, 61
BsiHKAI GWGCWC 1 cut(s) 291
BsiSI CCGG 1 cut(s) 260
BslFI GGGAC 1 cut(s) 54
BslI CCNNNNNNNGG 2 cut(s) 244, 245
BsmFI GGGAC 1 cut(s) 54
BsnI GGCC 2 cut(s) 45, 61
Bsp1286I GDGCHC 1 cut(s) 291
Bsp143I GATC 1 cut(s) 14
BspACI CCGC 4 cut(s) 40, 42, 245, 263
BspANI GGCC 2 cut(s) 45, 61
BspFNI CGCG 2 cut(s) 42, 101
BspLI GGNNCC 1 cut(s) 156
BspMAI CTGCAG 1 cut(s) 244
BssECI CCNNGG 2 cut(s) 23, 40
BssMI GATC 1 cut(s) 14
Bst2UI CCWGG 1 cut(s) 25
Bst4CI ACNGT 1 cut(s) 211
BstDSI CCRYGG 1 cut(s) 40
BstFNI CGCG 2 cut(s) 42, 101
BstKTI GATC 1 cut(s) 17
BstMBI GATC 1 cut(s) 14
BstNI CCWGG 1 cut(s) 25
BstSCI CCNGG 1 cut(s) 23
BstSFI CTRYAG 1 cut(s) 240
BstUI CGCG 2 cut(s) 42, 101
BstV1I GCAGC 3 cut(s) 156, 178, 254
BsuRI GGCC 2 cut(s) 45, 61
BtgI CCRYGG 1 cut(s) 40
CaiI CAGNNNCTG 1 cut(s) 172
Cfr42I CCGCGG 1 cut(s) 43
Csp6I GTAC 3 cut(s) 37, 80, 223
CviAII CATG 2 cut(s) 47, 66
CviJI RGCY 6 cut(s) 5, 45, 61, 155, 169, 312
CviKI_1 RGCY 6 cut(s) 5, 45, 61, 155, 169, 312
CviQI GTAC 3 cut(s) 37, 80, 223
DpnI GATC 1 cut(s) 16
DpnII GATC 1 cut(s) 14
EaeI YGGCCR 1 cut(s) 43
EciI GGCGGA 1 cut(s) 278
EcoRII CCWGG 1 cut(s) 23
FaeI CATG 2 cut(s) 50, 69
FaiI YATR 3 cut(s) 48, 67, 309
FaqI GGGAC 1 cut(s) 54
FatI CATG 2 cut(s) 46, 65
FauI CCCGC 1 cut(s) 238
Fnu4HI GCNGC 4 cut(s) 43, 167, 170, 243
Fsp4HI GCNGC 4 cut(s) 43, 167, 170, 243
GluI GCNGC 4 cut(s) 43, 167, 170, 243
HaeIII GGCC 2 cut(s) 45, 61
HapII CCGG 1 cut(s) 260
Hin1II CATG 2 cut(s) 50, 69
HinfI GANTC 1 cut(s) 28
HpaII CCGG 1 cut(s) 260
Hpy188I TCNGA 1 cut(s) 132
Hpy188III TCNNGA 1 cut(s) 233
Hpy99I CGWCG 1 cut(s) 132
HpyAV CCTTC 2 cut(s) 72, 109
HpyCH4III ACNGT 1 cut(s) 211
HpyCH4IV ACGT 1 cut(s) 35
HpyCH4V TGCA 1 cut(s) 242
HpySE526I ACGT 1 cut(s) 35
Hsp92II CATG 2 cut(s) 50, 69
KspI CCGCGG 1 cut(s) 43
Kzo9I GATC 1 cut(s) 14
LmnI GCTCC 2 cut(s) 160, 286
LpnPI CCDG 6 cut(s) 10, 37, 85, 158, 252, 273
Lsp1109I GCAGC 3 cut(s) 156, 178, 254
MaeII ACGT 1 cut(s) 35
MaeIII GTNAC 3 cut(s) 95, 205, 233
MalI GATC 1 cut(s) 16
MboI GATC 1 cut(s) 14
MboII GAAGA 1 cut(s) 281
MhlI GDGCHC 1 cut(s) 291
MluCI AATT 3 cut(s) 88, 183, 198
MluI ACGCGT 1 cut(s) 99
MmeI TCCRAC 1 cut(s) 110
MnlI CCTC 1 cut(s) 259
MseI TTAA 2 cut(s) 11, 186
MspA1I CMGCKG 3 cut(s) 42, 169, 245
MspI CCGG 1 cut(s) 260
MspR9I CCNGG 1 cut(s) 25
MvaI CCWGG 1 cut(s) 25
MvnI CGCG 2 cut(s) 42, 101
NdeII GATC 1 cut(s) 14
NlaIII CATG 2 cut(s) 50, 69
NlaIV GGNNCC 1 cut(s) 156
NmuCI GTSAC 1 cut(s) 233
PfeI GAWTC 1 cut(s) 28
PkrI GCNGC 4 cut(s) 44, 168, 171, 244
Psp6I CCWGG 1 cut(s) 23
PspGI CCWGG 1 cut(s) 23
PspN4I GGNNCC 1 cut(s) 156
PstI CTGCAG 1 cut(s) 244
PstNI CAGNNNCTG 1 cut(s) 172
PvuII CAGCTG 1 cut(s) 169
RsaI GTAC 3 cut(s) 38, 81, 224
RsaNI GTAC 3 cut(s) 37, 80, 223
SacII CCGCGG 1 cut(s) 43
SaqAI TTAA 2 cut(s) 11, 186
SatI GCNGC 4 cut(s) 43, 167, 170, 243
Sau3AI GATC 1 cut(s) 14
ScrFI CCNGG 1 cut(s) 25
SduI GDGCHC 1 cut(s) 291
SetI ASST 2 cut(s) 38, 171
SfcI CTRYAG 1 cut(s) 240
Sfr303I CCGCGG 1 cut(s) 43
SgrBI CCGCGG 1 cut(s) 43
Sse9I AATT 3 cut(s) 88, 183, 198
SsiI CCGC 4 cut(s) 40, 42, 245, 263
SspI AATATT 1 cut(s) 256
StyD4I CCNGG 1 cut(s) 23
TaaI ACNGT 1 cut(s) 211
TaiI ACGT 1 cut(s) 38
TasI AATT 3 cut(s) 88, 183, 198
TauI GCSGC 1 cut(s) 45
TfiI GAWTC 1 cut(s) 28
Tru1I TTAA 2 cut(s) 11, 186
Tru9I TTAA 2 cut(s) 11, 186
TseFI GTSAC 1 cut(s) 233
TseI GCWGC 3 cut(s) 166, 169, 242
Tsp45I GTSAC 1 cut(s) 233
TspDTI ATGAA 2 cut(s) 54, 128
XapI RAATTY 1 cut(s) 88
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.