pycom02g15240

NEMP family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
N/A
Physical Location & Seq
Reverse (-)
11914973 .. 11915374
402 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 306 bp
ATGAGAAGAAATTCATTATCGTGCGATATGATAATGTCATTGTCTCTGAATATGTTTTGTATTGCTGTAAAGTTATTTCTGTGTGGAATGATCTGTTTTTTCTTTCGTTGCAGAAGTACATCTCTTGGGATATGGATGTGTCCTCACAGCTCTCGGCAGAAGGTTCCCAAAGGCTCCTGGTCAAGGTCCATTTCACCTTTTGAGCACCAACTAATAGATGTACGGACATATGGTTCATCCTTAGAGAGCTTGGAGGTGTCCATTGAAGAAGAATTTGTTAAATATCACGTAACATTTGTGATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

102

Amino Acids

11.71

Weight (kDa)

8.63

Isoelectric Point (pI)

64.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 10, 272
AfaI GTAC 2 cut(s) 118, 222
AfiI CCNNNNNNNGG 1 cut(s) 183
AgsI TTSAA 1 cut(s) 266
AjnI CCWGG 1 cut(s) 176
AloI GAACNNNNNNTCC 2 cut(s) 217, 249
AluBI AGCT 2 cut(s) 150, 249
AluI AGCT 2 cut(s) 150, 249
Alw21I GWGCWC 1 cut(s) 207
Alw26I GTCTC 1 cut(s) 48
ApoI RAATTY 2 cut(s) 10, 272
Asp700I GAANNNNTTC 1 cut(s) 10
AspS9I GGNCC 1 cut(s) 186
AsuHPI GGTGA 1 cut(s) 186
AvaII GGWCC 1 cut(s) 186
Bbv12I GWGCWC 1 cut(s) 207
BciT130I CCWGG 1 cut(s) 178
BcoDI GTCTC 1 cut(s) 48
Bme1390I CCNGG 1 cut(s) 178
Bme18I GGWCC 1 cut(s) 186
BmgT120I GGNCC 1 cut(s) 186
BmiI GGNNCC 2 cut(s) 165, 175
BmrFI CCNGG 1 cut(s) 178
BsaAI YACGTR 1 cut(s) 289
Bsc4I CCNNNNNNNGG 1 cut(s) 183
BseBI CCWGG 1 cut(s) 178
BseGI GGATG 2 cut(s) 141, 236
BseLI CCNNNNNNNGG 1 cut(s) 183
BsiHKAI GWGCWC 1 cut(s) 207
BslI CCNNNNNNNGG 1 cut(s) 183
BsmAI GTCTC 1 cut(s) 48
Bsp1286I GDGCHC 1 cut(s) 207
Bsp143I GATC 1 cut(s) 90
BspLI GGNNCC 2 cut(s) 165, 175
BssMI GATC 1 cut(s) 90
Bst2UI CCWGG 1 cut(s) 178
BstBAI YACGTR 1 cut(s) 289
BstDEI CTNAG 1 cut(s) 241
BstENI CCTNNNNNAGG 1 cut(s) 181
BstF5I GGATG 2 cut(s) 141, 236
BstKTI GATC 1 cut(s) 93
BstMAI GTCTC 1 cut(s) 48
BstMBI GATC 1 cut(s) 90
BstNI CCWGG 1 cut(s) 178
BstSCI CCNGG 1 cut(s) 176
BtsCI GGATG 2 cut(s) 141, 236
Cfr13I GGNCC 1 cut(s) 186
Csp6I GTAC 2 cut(s) 117, 221
CviJI RGCY 3 cut(s) 150, 174, 249
CviKI_1 RGCY 3 cut(s) 150, 174, 249
CviQI GTAC 2 cut(s) 117, 221
DdeI CTNAG 1 cut(s) 241
DpnI GATC 1 cut(s) 92
DpnII GATC 1 cut(s) 90
Eco47I GGWCC 1 cut(s) 186
EcoNI CCTNNNNNAGG 1 cut(s) 181
EcoRII CCWGG 1 cut(s) 176
FaiI YATR 6 cut(s) 29, 53, 133, 229, 231, 304
FauNDI CATATG 1 cut(s) 229
FokI GGATG 2 cut(s) 148, 223
HphI GGTGA 1 cut(s) 186
Hpy188I TCNGA 1 cut(s) 48
HpyAV CCTTC 1 cut(s) 154
HpyCH4IV ACGT 1 cut(s) 288
HpyCH4V TGCA 1 cut(s) 111
HpyF3I CTNAG 1 cut(s) 241
HpySE526I ACGT 1 cut(s) 288
Kzo9I GATC 1 cut(s) 90
LmnI GCTCC 1 cut(s) 179
LpnPI CCDG 2 cut(s) 163, 190
MaeII ACGT 1 cut(s) 288
MaeIII GTNAC 1 cut(s) 289
MalI GATC 1 cut(s) 92
MboI GATC 1 cut(s) 90
MboII GAAGA 3 cut(s) 18, 278, 281
MhlI GDGCHC 1 cut(s) 207
MluCI AATT 2 cut(s) 10, 272
MnlI CCTC 2 cut(s) 153, 247
MroXI GAANNNNTTC 1 cut(s) 10
MseI TTAA 1 cut(s) 279
MslI CAYNNNNRTG 1 cut(s) 19
MspR9I CCNGG 1 cut(s) 178
MvaI CCWGG 1 cut(s) 178
NdeI CATATG 1 cut(s) 229
NdeII GATC 1 cut(s) 90
NlaIV GGNNCC 2 cut(s) 165, 175
NmeAIII GCCGAG 1 cut(s) 133
PdmI GAANNNNTTC 1 cut(s) 10
Ppu21I YACGTR 1 cut(s) 289
Psp6I CCWGG 1 cut(s) 176
PspGI CCWGG 1 cut(s) 176
PspN4I GGNNCC 2 cut(s) 165, 175
PspPI GGNCC 1 cut(s) 186
RsaI GTAC 2 cut(s) 118, 222
RsaNI GTAC 2 cut(s) 117, 221
RseI CAYNNNNRTG 1 cut(s) 19
SaqAI TTAA 1 cut(s) 279
Sau3AI GATC 1 cut(s) 90
Sau96I GGNCC 1 cut(s) 186
ScrFI CCNGG 1 cut(s) 178
SduI GDGCHC 1 cut(s) 207
SetI ASST 7 cut(s) 152, 165, 188, 199, 251, 258, 291
SgeI CNNG 8 cut(s) 33, 137, 165, 189, 190, 195, 262, 299
SinI GGWCC 1 cut(s) 186
SmiMI CAYNNNNRTG 1 cut(s) 19
Sse9I AATT 2 cut(s) 10, 272
StyD4I CCNGG 1 cut(s) 176
TaiI ACGT 1 cut(s) 291
TasI AATT 2 cut(s) 10, 272
TatI WGTACW 1 cut(s) 116
Tru1I TTAA 1 cut(s) 279
Tru9I TTAA 1 cut(s) 279
TspDTI ATGAA 1 cut(s) 225
TspGWI ACGGA 1 cut(s) 238
VpaK11BI GGWCC 1 cut(s) 186
XagI CCTNNNNNAGG 1 cut(s) 181
XapI RAATTY 2 cut(s) 10, 272
XmnI GAANNNNTTC 1 cut(s) 10
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.