pycom02g15410

O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
N/A
Physical Location & Seq
Forward (+)
12242406 .. 12243384
979 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 264 bp
ATGGTTGTGGCTTTGAAGCTCCTGAAGCAACTTCGAGCACCACTCACCAGCTCCACAATCCTCTACCACAATCTCAGCCCACGGCTCTTGAGCTGCAGAGCAATCTTTGCCATTCCGGCTCGACTACCACTAAACCTTGATTCTCCTTCACCGTTGTGTTTGAAGCAGTACAAGCTTGTCAAGTCCGCCACCATTGCCGAAACCTGTGCTCAGGCAATAACCTACGGGAAGCCAATACTAAGATCTATTGTTCCTTCTCTTTGA

Protein Analysis

88

Amino Acids

9.51

Weight (kDa)

10.13

Isoelectric Point (pI)

61.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 186
AcuI CTGAAG 1 cut(s) 44
AfaI GTAC 1 cut(s) 170
AgsI TTSAA 2 cut(s) 16, 163
AleI CACNNNNGTG 1 cut(s) 154
AluBI AGCT 4 cut(s) 19, 51, 93, 175
AluI AGCT 4 cut(s) 19, 51, 93, 175
Alw21I GWGCWC 2 cut(s) 40, 211
ApeKI GCWGC 1 cut(s) 93
AsuHPI GGTGA 2 cut(s) 37, 141
Bbv12I GWGCWC 2 cut(s) 40, 211
BbvI GCAGC 1 cut(s) 80
BceAI ACGGC 1 cut(s) 98
BcgI CGANNNNNNTGC 2 cut(s) 188, 222
BfmI CTRYAG 1 cut(s) 94
BglI GCCNNNNNGGC 1 cut(s) 116
BglII AGATCT 1 cut(s) 242
BisI GCNGC 1 cut(s) 94
BlsI GCNGC 1 cut(s) 95
BplI GAGNNNNNCTC 2 cut(s) 27, 59
Bpu10I CCTNAGC 1 cut(s) 210
BpuEI CTTGAG 1 cut(s) 109
BsaJI CCNNGG 1 cut(s) 80
Bse3DI GCAATG 1 cut(s) 192
BseDI CCNNGG 1 cut(s) 80
BseMI GCAATG 1 cut(s) 192
BseMII CTCAG 2 cut(s) 88, 224
BseXI GCAGC 1 cut(s) 80
BsiHKAI GWGCWC 2 cut(s) 40, 211
BsiSI CCGG 1 cut(s) 116
Bsp1286I GDGCHC 2 cut(s) 40, 211
Bsp143I GATC 1 cut(s) 242
BspACI CCGC 1 cut(s) 186
BspCNI CTCAG 2 cut(s) 87, 223
BspMAI CTGCAG 1 cut(s) 98
BsrDI GCAATG 1 cut(s) 192
BssECI CCNNGG 1 cut(s) 80
BssMI GATC 1 cut(s) 242
Bst4CI ACNGT 1 cut(s) 153
BstAPI GCANNNNNTGC 1 cut(s) 107
BstDEI CTNAG 3 cut(s) 74, 210, 239
BstDSI CCRYGG 1 cut(s) 80
BstKTI GATC 1 cut(s) 245
BstMBI GATC 1 cut(s) 242
BstMWI GCNNNNNNNGC 5 cut(s) 25, 107, 116, 172, 194
BstSFI CTRYAG 1 cut(s) 94
BstV1I GCAGC 1 cut(s) 80
BstX2I RGATCY 1 cut(s) 242
BstYI RGATCY 1 cut(s) 242
BtgI CCRYGG 1 cut(s) 80
Csp6I GTAC 1 cut(s) 169
CspCI CAANNNNNGTGG 2 cut(s) 69, 104
CviJI RGCY 9 cut(s) 11, 19, 51, 78, 85, 93, 119, 175, 232
CviKI_1 RGCY 9 cut(s) 11, 19, 51, 78, 85, 93, 119, 175, 232
CviQI GTAC 1 cut(s) 169
DdeI CTNAG 3 cut(s) 74, 210, 239
DpnI GATC 1 cut(s) 244
DpnII GATC 1 cut(s) 242
EciI GGCGGA 1 cut(s) 175
Eco57I CTGAAG 1 cut(s) 44
Fnu4HI GCNGC 1 cut(s) 94
Fsp4HI GCNGC 1 cut(s) 94
GluI GCNGC 1 cut(s) 94
HapII CCGG 1 cut(s) 116
HindIII AAGCTT 1 cut(s) 173
HinfI GANTC 1 cut(s) 140
HpaII CCGG 1 cut(s) 116
HphI GGTGA 2 cut(s) 37, 141
Hpy188III TCNNGA 2 cut(s) 22, 88
HpyAV CCTTC 2 cut(s) 156, 264
HpyCH4III ACNGT 1 cut(s) 153
HpyCH4V TGCA 1 cut(s) 96
HpyF10VI GCNNNNNNNGC 5 cut(s) 25, 107, 116, 172, 194
HpyF3I CTNAG 3 cut(s) 74, 210, 239
Kzo9I GATC 1 cut(s) 242
LmnI GCTCC 2 cut(s) 24, 56
LpnPI CCDG 5 cut(s) 35, 61, 129, 197, 217
Lsp1109I GCAGC 1 cut(s) 80
MalI GATC 1 cut(s) 244
MboI GATC 1 cut(s) 242
MflI RGATCY 1 cut(s) 242
MhlI GDGCHC 2 cut(s) 40, 211
MnlI CCTC 1 cut(s) 71
MslI CAYNNNNRTG 1 cut(s) 154
MspI CCGG 1 cut(s) 116
MwoI GCNNNNNNNGC 5 cut(s) 25, 107, 116, 172, 194
NdeII GATC 1 cut(s) 242
OliI CACNNNNGTG 1 cut(s) 154
PfeI GAWTC 1 cut(s) 140
PkrI GCNGC 1 cut(s) 95
PstI CTGCAG 1 cut(s) 98
PsuI RGATCY 1 cut(s) 242
RsaI GTAC 1 cut(s) 170
RsaNI GTAC 1 cut(s) 169
RseI CAYNNNNRTG 1 cut(s) 154
SatI GCNGC 1 cut(s) 94
Sau3AI GATC 1 cut(s) 242
SduI GDGCHC 2 cut(s) 40, 211
SetI ASST 7 cut(s) 21, 53, 95, 138, 177, 206, 224
SfcI CTRYAG 1 cut(s) 94
SmiMI CAYNNNNRTG 1 cut(s) 154
SmlI CTYRAG 1 cut(s) 88
SmoI CTYRAG 1 cut(s) 88
SsiI CCGC 1 cut(s) 186
TaaI ACNGT 1 cut(s) 153
TaqI TCGA 2 cut(s) 34, 121
TatI WGTACW 1 cut(s) 168
TfiI GAWTC 1 cut(s) 140
TseI GCWGC 1 cut(s) 93
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.