pycom02g17110

Protein of unknown function (DUF2921)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
N/A
Physical Location & Seq
Reverse (-)
14627118 .. 14627524
407 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 360 bp
ATGCTGGCACCTTCTTCCTGCTCTATGCAATTAATTTCAATACCCAAGAGAGCTGTGCCAAAACCATTCCTCATCTACAAGGATAGCAATAGCTATGATATGATCAATGAAGTGACGAAAGAATGTGGTTTTGTTCTTTCTTCTGCTTCTGTTTTTGCCAATGGGGACTGGAGGCAGGAGGTGGGTAATGCCCCAATCATCCCATTTGATGACGGAGAAATTCAAATGAGGTTGGTAGAGGAGATTAATCGTACATCATCGAACTTGGTTTCGTTTTGGGTTATGGATGTTGATCGTGCCCATCAATCCAAGAAGTCAGTGAGTGTTGATGGGGTCATGACTTTTGCAATTGGAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

120

Amino Acids

13.21

Weight (kDa)

5.01

Isoelectric Point (pI)

40.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 7
AcsI RAATTY 2 cut(s) 219, 354
AfaI GTAC 1 cut(s) 253
AgsI TTSAA 2 cut(s) 39, 224
AluBI AGCT 2 cut(s) 53, 93
AluI AGCT 2 cut(s) 53, 93
ApoI RAATTY 2 cut(s) 219, 354
AseI ATTAAT 2 cut(s) 32, 246
BaeGI GKGCMC 1 cut(s) 301
BanI GGYRCC 1 cut(s) 7
BccI CCATC 2 cut(s) 309, 323
BclI TGATCA 1 cut(s) 102
BmiI GGNNCC 1 cut(s) 9
BpmI CTGGAG 1 cut(s) 190
BsaBI GATNNNNATC 1 cut(s) 291
Bse1I ACTGG 1 cut(s) 173
Bse8I GATNNNNATC 1 cut(s) 291
BseGI GGATG 2 cut(s) 198, 292
BseJI GATNNNNATC 1 cut(s) 291
BseNI ACTGG 1 cut(s) 173
BseRI GAGGAG 1 cut(s) 254
BseSI GKGCMC 1 cut(s) 301
BshNI GGYRCC 1 cut(s) 7
BslFI GGGAC 1 cut(s) 179
BsmFI GGGAC 1 cut(s) 179
Bsp1286I GDGCHC 1 cut(s) 301
Bsp143I GATC 2 cut(s) 102, 292
BspHI TCATGA 1 cut(s) 336
BspLI GGNNCC 1 cut(s) 9
BspT107I GGYRCC 1 cut(s) 7
BsrI ACTGG 1 cut(s) 173
BssMI GATC 2 cut(s) 102, 292
BstC8I GCNNGC 1 cut(s) 6
BstF5I GGATG 2 cut(s) 198, 292
BstKTI GATC 2 cut(s) 105, 295
BstMBI GATC 2 cut(s) 102, 292
BstSLI GKGCMC 1 cut(s) 301
BtsCI GGATG 2 cut(s) 198, 292
BtsIMutI CAGTG 1 cut(s) 324
Cac8I GCNNGC 1 cut(s) 6
CciI TCATGA 1 cut(s) 336
Csp6I GTAC 1 cut(s) 252
CviAII CATG 1 cut(s) 337
CviJI RGCY 2 cut(s) 53, 93
CviKI_1 RGCY 2 cut(s) 53, 93
CviQI GTAC 1 cut(s) 252
DpnI GATC 2 cut(s) 104, 294
DpnII GATC 2 cut(s) 102, 292
FaeI CATG 1 cut(s) 340
FaiI YATR 5 cut(s) 26, 96, 101, 284, 338
FaqI GGGAC 1 cut(s) 179
FatI CATG 1 cut(s) 336
FbaI TGATCA 1 cut(s) 102
FokI GGATG 2 cut(s) 185, 299
GsuI CTGGAG 1 cut(s) 190
Hin1II CATG 1 cut(s) 340
Hpy188III TCNNGA 1 cut(s) 337
HpyAV CCTTC 1 cut(s) 21
HpyCH4V TGCA 2 cut(s) 28, 347
Hsp92II CATG 1 cut(s) 340
Ksp22I TGATCA 1 cut(s) 102
Kzo9I GATC 2 cut(s) 102, 292
LpnPI CCDG 3 cut(s) 31, 154, 161
MaeIII GTNAC 1 cut(s) 112
MalI GATC 2 cut(s) 104, 294
MboI GATC 2 cut(s) 102, 292
MboII GAAGA 2 cut(s) 6, 132
MfeI CAATTG 1 cut(s) 348
MhlI GDGCHC 1 cut(s) 301
MluCI AATT 5 cut(s) 29, 33, 219, 348, 354
MnlI CCTC 5 cut(s) 80, 165, 172, 222, 232
MseI TTAA 2 cut(s) 32, 246
MunI CAATTG 1 cut(s) 348
NdeII GATC 2 cut(s) 102, 292
NlaIII CATG 1 cut(s) 340
NlaIV GGNNCC 1 cut(s) 9
NmuCI GTSAC 1 cut(s) 112
PagI TCATGA 1 cut(s) 336
PshBI ATTAAT 2 cut(s) 32, 246
PspN4I GGNNCC 1 cut(s) 9
RsaI GTAC 1 cut(s) 253
RsaNI GTAC 1 cut(s) 252
SaqAI TTAA 2 cut(s) 32, 246
Sau3AI GATC 2 cut(s) 102, 292
SduI GDGCHC 1 cut(s) 301
SetI ASST 5 cut(s) 13, 55, 95, 183, 233
Sse9I AATT 5 cut(s) 29, 33, 219, 348, 354
TaqI TCGA 1 cut(s) 260
TasI AATT 5 cut(s) 29, 33, 219, 348, 354
Tru1I TTAA 2 cut(s) 32, 246
Tru9I TTAA 2 cut(s) 32, 246
TscAI CASTG 1 cut(s) 324
TseFI GTSAC 1 cut(s) 112
Tsp45I GTSAC 1 cut(s) 112
TspDTI ATGAA 1 cut(s) 123
TspGWI ACGGA 1 cut(s) 228
TspRI CASTG 1 cut(s) 324
VspI ATTAAT 2 cut(s) 32, 246
XapI RAATTY 2 cut(s) 219, 354
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.