pycom02g18810

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
N/A
Physical Location & Seq
Reverse (-)
16897548 .. 16907349
9802 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 612 bp
ATGATTGCCACCACAATTTTCCTTCTAACCCTTTCAGCCCTCTCTCCTCTTCTGATTCTTCTCTCTAACTCTATCCTCCCTCTGCAACGACTGTGCCAAGACCCAAGCACCACCTTGGTTGCCACCCCAGCAAACTTCTCCACCACCAGCCACCACCATCGTAACGACACTTCCTTTTCTCCCTTGTCGCAAACCCTCATCTCTCTTCCTTTCTCTGTGCTTGCTACACATAAATGCCGACGAGAATCTGGTGAGTCCATAGCATCTCTGACGATGCAACGAGGATTTTTGGCAAATATGGAATTGCAGACTACCTCCGATGGTTTAACAGCTGAACTTTTGTATCGAAGAGGATTCTTGGCAAATATGGTATTGGAGACTACCTCGAATGAATCAGTAGCAGTTGCAGTAAGCATATTCGATGTTGAAGCATCTACCCAAAGCTCTGGCACATTCTTACTTGTCAAGGAGCCTAACAAGTCTATCATGGAGTACATACAACACTTCAAGACCGAGAAGGCCAAGATTGTCAACTACGATGAAACAGTCGCATGGACATCTTTCAAGCGAAGATTGTCAGCAGGTCATTCACCCCGCAGAGACATCGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

204

Amino Acids

22.41

Weight (kDa)

7.86

Isoelectric Point (pI)

45.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 572
AciI CCGC 1 cut(s) 595
AfaI GTAC 1 cut(s) 494
AgsI TTSAA 3 cut(s) 428, 508, 565
AluBI AGCT 2 cut(s) 332, 444
AluI AGCT 2 cut(s) 332, 444
Alw26I GTCTC 2 cut(s) 371, 594
AoxI GGCC 1 cut(s) 519
AsuHPI GGTGA 2 cut(s) 263, 582
BaeI ACNNNNGTAYC 2 cut(s) 326, 359
BarI GAAGNNNNNNTAC 2 cut(s) 154, 186
BccI CCATC 2 cut(s) 165, 314
BcgI CGANNNNNNTGC 1 cut(s) 586
BcoDI GTCTC 2 cut(s) 371, 594
BfuAI ACCTGC 1 cut(s) 572
BmiI GGNNCC 1 cut(s) 471
BmsI GCATC 3 cut(s) 264, 272, 440
BplI GAGNNNNNCTC 2 cut(s) 368, 400
BsaJI CCNNGG 1 cut(s) 114
BseDI CCNNGG 1 cut(s) 114
BseRI GAGGAG 1 cut(s) 36
BseYI CCCAGC 1 cut(s) 127
BshFI GGCC 1 cut(s) 521
BsmAI GTCTC 2 cut(s) 371, 594
BsnI GGCC 1 cut(s) 521
BspACI CCGC 1 cut(s) 595
BspANI GGCC 1 cut(s) 521
BspLI GGNNCC 1 cut(s) 471
BspMI ACCTGC 1 cut(s) 572
BssECI CCNNGG 1 cut(s) 114
BssT1I CCWWGG 1 cut(s) 114
Bst4CI ACNGT 2 cut(s) 93, 547
Bst6I CTCTTC 3 cut(s) 54, 210, 343
BstC8I GCNNGC 1 cut(s) 222
BstMAI GTCTC 2 cut(s) 371, 594
BstMWI GCNNNNNNNGC 1 cut(s) 128
BstXI CCANNNNNNTGG 1 cut(s) 446
BsuRI GGCC 1 cut(s) 521
BveI ACCTGC 1 cut(s) 572
Cac8I GCNNGC 1 cut(s) 222
Csp6I GTAC 1 cut(s) 493
CspCI CAANNNNNGTGG 2 cut(s) 100, 135
CviAII CATG 2 cut(s) 487, 552
CviJI RGCY 6 cut(s) 38, 150, 332, 444, 472, 521
CviKI_1 RGCY 6 cut(s) 38, 150, 332, 444, 472, 521
CviQI GTAC 1 cut(s) 493
Eam1104I CTCTTC 3 cut(s) 54, 210, 343
EarI CTCTTC 3 cut(s) 54, 210, 343
Eco130I CCWWGG 1 cut(s) 114
EcoT14I CCWWGG 1 cut(s) 114
ErhI CCWWGG 1 cut(s) 114
FaeI CATG 2 cut(s) 490, 555
FaiI YATR 8 cut(s) 231, 260, 299, 368, 416, 488, 497, 553
FatI CATG 2 cut(s) 486, 551
FauI CCCGC 1 cut(s) 602
GsaI CCCAGC 1 cut(s) 131
HaeIII GGCC 1 cut(s) 521
Hin1II CATG 2 cut(s) 490, 555
HincII GTYRAC 1 cut(s) 532
HindII GTYRAC 1 cut(s) 532
HinfI GANTC 5 cut(s) 55, 245, 254, 354, 392
HphI GGTGA 2 cut(s) 263, 582
Hpy166II GTNNAC 1 cut(s) 532
Hpy188I TCNGA 3 cut(s) 54, 270, 319
Hpy188III TCNNGA 1 cut(s) 508
Hpy8I GTNNAC 1 cut(s) 532
Hpy99I CGWCG 1 cut(s) 243
HpyAV CCTTC 2 cut(s) 32, 511
HpyCH4III ACNGT 2 cut(s) 93, 547
HpyCH4V TGCA 4 cut(s) 85, 277, 307, 407
HpyF10VI GCNNNNNNNGC 1 cut(s) 128
Hsp92II CATG 2 cut(s) 490, 555
LmnI GCTCC 1 cut(s) 469
LpnPI CCDG 5 cut(s) 141, 160, 234, 432, 567
LweI GCATC 3 cut(s) 264, 272, 440
MaeIII GTNAC 1 cut(s) 161
MboII GAAGA 5 cut(s) 41, 50, 197, 360, 582
MluCI AATT 2 cut(s) 15, 302
MlyI GAGTC 1 cut(s) 263
MnlI CCTC 9 cut(s) 50, 57, 86, 90, 206, 275, 325, 344, 394
MseI TTAA 1 cut(s) 326
MslI CAYNNNNRTG 1 cut(s) 232
MspA1I CMGCKG 1 cut(s) 332
MwoI GCNNNNNNNGC 1 cut(s) 128
NlaIII CATG 2 cut(s) 490, 555
NlaIV GGNNCC 1 cut(s) 471
PfeI GAWTC 4 cut(s) 55, 245, 354, 392
PleI GAGTC 1 cut(s) 262
PpsI GAGTC 1 cut(s) 262
PspFI CCCAGC 1 cut(s) 127
PspN4I GGNNCC 1 cut(s) 471
PvuII CAGCTG 1 cut(s) 332
RsaI GTAC 1 cut(s) 494
RsaNI GTAC 1 cut(s) 493
RseI CAYNNNNRTG 1 cut(s) 232
SaqAI TTAA 1 cut(s) 326
SchI GAGTC 1 cut(s) 263
SetI ASST 6 cut(s) 116, 317, 334, 386, 446, 586
SfaNI GCATC 3 cut(s) 264, 272, 440
SmiMI CAYNNNNRTG 1 cut(s) 232
Sse9I AATT 2 cut(s) 15, 302
SsiI CCGC 1 cut(s) 595
StyI CCWWGG 1 cut(s) 114
TaaI ACNGT 2 cut(s) 93, 547
TaqI TCGA 3 cut(s) 346, 386, 420
TaqII GACCGA 1 cut(s) 527
TasI AATT 2 cut(s) 15, 302
TatI WGTACW 1 cut(s) 492
TfiI GAWTC 4 cut(s) 55, 245, 354, 392
Tru1I TTAA 1 cut(s) 326
Tru9I TTAA 1 cut(s) 326
TspDTI ATGAA 2 cut(s) 405, 555
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.