pycom02g23990

Reticulon-like protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
N/A
Physical Location & Seq
Reverse (-)
22081085 .. 22081856
772 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 198 bp
ATGCCACTGATTTTGGGTACTGATTTTCTGGGATTTTTTTGGTCCTTGCAGGATTTTGGGTCTTTGAAATGGTCTCCACCCCACATTTCACAAGTTCAAATTCCATTGAAGTCGATTCTGCAGATTGTGTCTACAATTAGATCAGAGATCAACCGCTCTTTTGTATTCTGCGGAAGATTGCTTTTGGGAATGATCTGA

Protein Analysis

66

Amino Acids

7.39

Weight (kDa)

9.3

Isoelectric Point (pI)

65.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 156
AccI GTMKAC 1 cut(s) 131
AciI CCGC 2 cut(s) 154, 171
AcsI RAATTY 1 cut(s) 99
AfaI GTAC 1 cut(s) 19
AgsI TTSAA 3 cut(s) 67, 98, 109
Alw26I GTCTC 1 cut(s) 78
ApoI RAATTY 1 cut(s) 99
AspS9I GGNCC 1 cut(s) 42
AvaII GGWCC 1 cut(s) 42
BcoDI GTCTC 1 cut(s) 78
BfmI CTRYAG 1 cut(s) 119
Bme18I GGWCC 1 cut(s) 42
BmgT120I GGNCC 1 cut(s) 42
BsaI GGTCTC 1 cut(s) 78
BsmAI GTCTC 1 cut(s) 78
Bso31I GGTCTC 1 cut(s) 78
Bsp143I GATC 3 cut(s) 140, 147, 192
BspACI CCGC 2 cut(s) 154, 171
BspMAI CTGCAG 1 cut(s) 123
BspTNI GGTCTC 1 cut(s) 78
BsrBI CCGCTC 1 cut(s) 156
BssMI GATC 3 cut(s) 140, 147, 192
BstKTI GATC 3 cut(s) 143, 150, 195
BstMAI GTCTC 1 cut(s) 78
BstMBI GATC 3 cut(s) 140, 147, 192
BstSFI CTRYAG 1 cut(s) 119
BtsIMutI CAGTG 1 cut(s) 5
Cfr13I GGNCC 1 cut(s) 42
Csp6I GTAC 1 cut(s) 18
CspCI CAANNNNNGTGG 1 cut(s) 29
CviQI GTAC 1 cut(s) 18
DpnI GATC 3 cut(s) 142, 149, 194
DpnII GATC 3 cut(s) 140, 147, 192
Eco31I GGTCTC 1 cut(s) 78
Eco47I GGWCC 1 cut(s) 42
FblI GTMKAC 1 cut(s) 131
HinfI GANTC 1 cut(s) 115
Hpy166II GTNNAC 1 cut(s) 132
Hpy188I TCNGA 2 cut(s) 145, 197
Hpy8I GTNNAC 1 cut(s) 132
HpyCH4V TGCA 2 cut(s) 49, 121
Kzo9I GATC 3 cut(s) 140, 147, 192
LpnPI CCDG 2 cut(s) 14, 35
MalI GATC 3 cut(s) 142, 149, 194
MbiI CCGCTC 1 cut(s) 156
MboI GATC 3 cut(s) 140, 147, 192
MboII GAAGA 1 cut(s) 186
MluCI AATT 2 cut(s) 99, 135
NdeII GATC 3 cut(s) 140, 147, 192
PfeI GAWTC 1 cut(s) 115
PspPI GGNCC 1 cut(s) 42
PstI CTGCAG 1 cut(s) 123
RsaI GTAC 1 cut(s) 19
RsaNI GTAC 1 cut(s) 18
Sau3AI GATC 3 cut(s) 140, 147, 192
Sau96I GGNCC 1 cut(s) 42
SfcI CTRYAG 1 cut(s) 119
SgeI CNNG 4 cut(s) 41, 58, 62, 104
SinI GGWCC 1 cut(s) 42
Sse9I AATT 2 cut(s) 99, 135
SsiI CCGC 2 cut(s) 154, 171
TaqI TCGA 1 cut(s) 113
TasI AATT 2 cut(s) 99, 135
TfiI GAWTC 1 cut(s) 115
TscAI CASTG 1 cut(s) 12
TspRI CASTG 1 cut(s) 12
VpaK11BI GGWCC 1 cut(s) 42
XapI RAATTY 1 cut(s) 99
XmiI GTMKAC 1 cut(s) 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.