pycom02g24890

Cytochrome p450

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
N/A
Physical Location & Seq
Forward (+)
22979920 .. 22980228
309 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 309 bp
ATGGGGAGAATGGAGGCGATTTGGGGAAAGGACTGTAGGGAGTACAAGCCTGAGAGATGGCTACAACCTTCAGATGGCCGTTTCATGAGTGAATCTGCCTACAAATTTACGGCTTTCAATGGCGGTCCTCGCCTGTGCTTGGGCAAAGATTTCGCTTATTATCAAATGAAGTTTGTTGCTGCCTCTATCATCTATCGATACCATGTGAAGGTGGTCGAAAATCATCGGGTGAAGCCAAAGCTTGCACTGACCATGTACATGAAGCATGGCTTGCAGGTCACTCTCCACAGACGTGACCATGCTAGCTGA

Protein Analysis

103

Amino Acids

12.05

Weight (kDa)

9.8

Isoelectric Point (pI)

40.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 1 - 85 1.3e-13 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 265
AciI CCGC 1 cut(s) 123
AcoI YGGCCR 1 cut(s) 76
AcsI RAATTY 1 cut(s) 104
AcuI CTGAAG 1 cut(s) 54
AfaI GTAC 2 cut(s) 44, 257
AfiI CCNNNNNNNGG 3 cut(s) 74, 139, 208
AgsI TTSAA 1 cut(s) 118
AjiI CACGTC 1 cut(s) 293
AleI CACNNNNGTG 1 cut(s) 291
AluBI AGCT 2 cut(s) 241, 306
AluI AGCT 2 cut(s) 241, 306
AoxI GGCC 1 cut(s) 76
ApeKI GCWGC 1 cut(s) 179
ApoI RAATTY 1 cut(s) 104
AspS9I GGNCC 1 cut(s) 125
AsuHPI GGTGA 1 cut(s) 241
AsuNHI GCTAGC 1 cut(s) 302
AvaII GGWCC 1 cut(s) 125
BbvI GCAGC 1 cut(s) 166
BccI CCATC 2 cut(s) 51, 68
BceAI ACGGC 2 cut(s) 63, 126
BcgI CGANNNNNNTGC 2 cut(s) 133, 167
BfaI CTAG 1 cut(s) 303
BfmI CTRYAG 1 cut(s) 34
BfuAI ACCTGC 1 cut(s) 265
BisI GCNGC 1 cut(s) 180
BlsI GCNGC 1 cut(s) 181
Bme18I GGWCC 1 cut(s) 125
BmgBI CACGTC 1 cut(s) 293
BmgT120I GGNCC 1 cut(s) 125
BmtI GCTAGC 1 cut(s) 306
Bsa29I ATCGAT 1 cut(s) 196
Bsc4I CCNNNNNNNGG 3 cut(s) 74, 139, 208
BseCI ATCGAT 1 cut(s) 196
BseLI CCNNNNNNNGG 3 cut(s) 74, 139, 208
BseMII CTCAG 1 cut(s) 42
BseXI GCAGC 1 cut(s) 166
BshFI GGCC 1 cut(s) 78
BshVI ATCGAT 1 cut(s) 196
BslI CCNNNNNNNGG 3 cut(s) 74, 139, 208
BsnI GGCC 1 cut(s) 78
Bsp1407I TGTACA 1 cut(s) 255
BspACI CCGC 1 cut(s) 123
BspANI GGCC 1 cut(s) 78
BspCNI CTCAG 1 cut(s) 43
BspDI ATCGAT 1 cut(s) 196
BspHI TCATGA 1 cut(s) 84
BspMI ACCTGC 1 cut(s) 265
BspOI GCTAGC 1 cut(s) 306
BsrGI TGTACA 1 cut(s) 255
Bst4CI ACNGT 1 cut(s) 35
BstAPI GCANNNNNTGC 1 cut(s) 271
BstAUI TGTACA 1 cut(s) 255
BstC8I GCNNGC 3 cut(s) 243, 272, 304
BstDEI CTNAG 1 cut(s) 51
BstMWI GCNNNNNNNGC 2 cut(s) 129, 271
BstSFI CTRYAG 1 cut(s) 34
BstV1I GCAGC 1 cut(s) 166
Bsu15I ATCGAT 1 cut(s) 196
BsuRI GGCC 1 cut(s) 78
BsuTUI ATCGAT 1 cut(s) 196
BtrI CACGTC 1 cut(s) 293
BtsIMutI CAGTG 1 cut(s) 245
BveI ACCTGC 1 cut(s) 265
Cac8I GCNNGC 3 cut(s) 243, 272, 304
CciI TCATGA 1 cut(s) 84
Cfr13I GGNCC 1 cut(s) 125
ClaI ATCGAT 1 cut(s) 196
Csp6I GTAC 2 cut(s) 43, 256
CviAII CATG 6 cut(s) 85, 203, 253, 259, 266, 299
CviJI RGCY 8 cut(s) 49, 61, 78, 113, 235, 241, 270, 306
CviKI_1 RGCY 8 cut(s) 49, 61, 78, 113, 235, 241, 270, 306
CviQI GTAC 2 cut(s) 43, 256
DdeI CTNAG 1 cut(s) 51
EaeI YGGCCR 1 cut(s) 76
Eco47I GGWCC 1 cut(s) 125
Eco57I CTGAAG 1 cut(s) 54
FaeI CATG 6 cut(s) 88, 206, 256, 262, 269, 302
FaiI YATR 6 cut(s) 86, 204, 254, 260, 267, 300
FalI AAGNNNNNCTT 2 cut(s) 254, 286
FatI CATG 6 cut(s) 84, 202, 252, 258, 265, 298
Fnu4HI GCNGC 1 cut(s) 180
Fsp4HI GCNGC 1 cut(s) 180
FspBI CTAG 1 cut(s) 303
GluI GCNGC 1 cut(s) 180
HaeIII GGCC 1 cut(s) 78
Hin1II CATG 6 cut(s) 88, 206, 256, 262, 269, 302
HindIII AAGCTT 1 cut(s) 239
HinfI GANTC 1 cut(s) 92
HphI GGTGA 1 cut(s) 241
Hpy188I TCNGA 1 cut(s) 73
Hpy188III TCNNGA 1 cut(s) 85
HpyAV CCTTC 2 cut(s) 78, 202
HpyCH4III ACNGT 1 cut(s) 35
HpyCH4IV ACGT 1 cut(s) 292
HpyCH4V TGCA 2 cut(s) 245, 274
HpyF10VI GCNNNNNNNGC 2 cut(s) 129, 271
HpyF3I CTNAG 1 cut(s) 51
HpySE526I ACGT 1 cut(s) 292
Hsp92II CATG 6 cut(s) 88, 206, 256, 262, 269, 302
LpnPI CCDG 3 cut(s) 63, 146, 260
Lsp1109I GCAGC 1 cut(s) 166
MaeI CTAG 1 cut(s) 303
MaeII ACGT 1 cut(s) 292
MaeIII GTNAC 2 cut(s) 277, 293
MluCI AATT 1 cut(s) 104
MnlI CCTC 3 cut(s) 7, 138, 193
MslI CAYNNNNRTG 2 cut(s) 257, 291
MwoI GCNNNNNNNGC 2 cut(s) 129, 271
NheI GCTAGC 1 cut(s) 302
NlaIII CATG 6 cut(s) 88, 206, 256, 262, 269, 302
NmuCI GTSAC 2 cut(s) 277, 293
OliI CACNNNNGTG 1 cut(s) 291
PagI TCATGA 1 cut(s) 84
PfeI GAWTC 1 cut(s) 92
PkrI GCNGC 1 cut(s) 181
PspPI GGNCC 1 cut(s) 125
RsaI GTAC 2 cut(s) 44, 257
RsaNI GTAC 2 cut(s) 43, 256
RseI CAYNNNNRTG 2 cut(s) 257, 291
SatI GCNGC 1 cut(s) 180
Sau96I GGNCC 1 cut(s) 125
SetI ASST 6 cut(s) 70, 213, 243, 279, 295, 308
SfcI CTRYAG 1 cut(s) 34
SinI GGWCC 1 cut(s) 125
SmiMI CAYNNNNRTG 2 cut(s) 257, 291
Sse9I AATT 1 cut(s) 104
SsiI CCGC 1 cut(s) 123
SspMI CTAG 1 cut(s) 303
TaaI ACNGT 1 cut(s) 35
TaiI ACGT 1 cut(s) 295
TaqI TCGA 2 cut(s) 196, 216
TasI AATT 1 cut(s) 104
TatI WGTACW 2 cut(s) 42, 255
TfiI GAWTC 1 cut(s) 92
TscAI CASTG 1 cut(s) 252
TseFI GTSAC 2 cut(s) 277, 293
TseI GCWGC 1 cut(s) 179
Tsp45I GTSAC 2 cut(s) 277, 293
TspDTI ATGAA 3 cut(s) 73, 182, 275
TspRI CASTG 1 cut(s) 252
VpaK11BI GGWCC 1 cut(s) 125
XapI RAATTY 1 cut(s) 104
XspI CTAG 1 cut(s) 303
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.