pycom03g00530

Phosphatidylinositol N-acetylglucosaminyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
N/A
Physical Location & Seq
Forward (+)
424519 .. 425283
765 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 216 bp
ATGAGGGAAAAACATTCTCTTCAAGATCGAGTTGAGATGCTAGGAGCCGTGCAACTCTCTAAAGTACGATCTGTCCTAATTTTTGGCCATATATTCTTAAACAGTTCTTTAACAGAAGCTTTTTGCATAGCGATCTTAGAGGCTGCAAGTTGTGGATTATTAACAGTCAGTCCACATGTAGGAGGCGTCCCAGAGAGGTACTTCCAGATGACATGA

Protein Analysis

72

Amino Acids

7.83

Weight (kDa)

6.81

Isoelectric Point (pI)

48.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glycos_transf_1 PF00534 3 - 65 6.8e-09 Glycosyl transferases group 1
Glyco_trans_1_4 PF13692 6 - 65 1.1e-09 Glycosyl transferases group 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 85
AcyI GRCGYC 1 cut(s) 186
AfaI GTAC 2 cut(s) 66, 200
AfiI CCNNNNNNNGG 1 cut(s) 179
AflIII ACRYGT 1 cut(s) 175
AgsI TTSAA 1 cut(s) 23
AluBI AGCT 1 cut(s) 119
AluI AGCT 1 cut(s) 119
AoxI GGCC 1 cut(s) 85
ApeKI GCWGC 1 cut(s) 143
BalI TGGCCA 1 cut(s) 87
BbvI GCAGC 1 cut(s) 130
BceAI ACGGC 1 cut(s) 32
BfaI CTAG 1 cut(s) 41
BisI GCNGC 1 cut(s) 144
BlsI GCNGC 1 cut(s) 145
BmiI GGNNCC 1 cut(s) 46
BmsI GCATC 1 cut(s) 27
BsaHI GRCGYC 1 cut(s) 186
Bsc4I CCNNNNNNNGG 1 cut(s) 179
BseLI CCNNNNNNNGG 1 cut(s) 179
BseXI GCAGC 1 cut(s) 130
BshFI GGCC 1 cut(s) 87
BslFI GGGAC 1 cut(s) 173
BslI CCNNNNNNNGG 1 cut(s) 179
BsmFI GGGAC 1 cut(s) 173
BsnI GGCC 1 cut(s) 87
Bsp143I GATC 3 cut(s) 25, 68, 132
BspANI GGCC 1 cut(s) 87
BspLI GGNNCC 1 cut(s) 46
BssMI GATC 3 cut(s) 25, 68, 132
BssNI GRCGYC 1 cut(s) 186
Bst4CI ACNGT 2 cut(s) 104, 166
Bst6I CTCTTC 1 cut(s) 24
BstACI GRCGYC 1 cut(s) 186
BstDEI CTNAG 1 cut(s) 136
BstKTI GATC 3 cut(s) 28, 71, 135
BstMBI GATC 3 cut(s) 25, 68, 132
BstNSI RCATGY 1 cut(s) 179
BstV1I GCAGC 1 cut(s) 130
BsuRI GGCC 1 cut(s) 87
CseI GACGC 1 cut(s) 175
Csp6I GTAC 2 cut(s) 65, 199
CviAII CATG 2 cut(s) 176, 213
CviJI RGCY 4 cut(s) 47, 87, 119, 143
CviKI_1 RGCY 4 cut(s) 47, 87, 119, 143
CviQI GTAC 2 cut(s) 65, 199
DdeI CTNAG 1 cut(s) 136
DpnI GATC 3 cut(s) 27, 70, 134
DpnII GATC 3 cut(s) 25, 68, 132
EaeI YGGCCR 1 cut(s) 85
Eam1104I CTCTTC 1 cut(s) 24
EarI CTCTTC 1 cut(s) 24
FaeI CATG 2 cut(s) 179, 216
FaiI YATR 5 cut(s) 90, 92, 128, 177, 214
FaqI GGGAC 1 cut(s) 173
FatI CATG 2 cut(s) 175, 212
Fnu4HI GCNGC 1 cut(s) 144
Fsp4HI GCNGC 1 cut(s) 144
FspBI CTAG 1 cut(s) 41
GluI GCNGC 1 cut(s) 144
HaeIII GGCC 1 cut(s) 87
HgaI GACGC 1 cut(s) 175
Hin1I GRCGYC 1 cut(s) 186
Hin1II CATG 2 cut(s) 179, 216
HindIII AAGCTT 1 cut(s) 117
Hpy166II GTNNAC 1 cut(s) 173
Hpy188III TCNNGA 2 cut(s) 23, 205
Hpy8I GTNNAC 1 cut(s) 173
HpyCH4III ACNGT 2 cut(s) 104, 166
HpyCH4V TGCA 3 cut(s) 52, 126, 146
HpyF3I CTNAG 1 cut(s) 136
Hsp92I GRCGYC 1 cut(s) 186
Hsp92II CATG 2 cut(s) 179, 216
Kzo9I GATC 3 cut(s) 25, 68, 132
LmnI GCTCC 1 cut(s) 44
LpnPI CCDG 1 cut(s) 204
Lsp1109I GCAGC 1 cut(s) 130
LweI GCATC 1 cut(s) 27
MaeI CTAG 1 cut(s) 41
MalI GATC 3 cut(s) 27, 70, 134
MboI GATC 3 cut(s) 25, 68, 132
MboII GAAGA 1 cut(s) 11
MlsI TGGCCA 1 cut(s) 87
MluCI AATT 1 cut(s) 78
MluNI TGGCCA 1 cut(s) 87
MnlI CCTC 3 cut(s) 133, 176, 189
Mox20I TGGCCA 1 cut(s) 87
MscI TGGCCA 1 cut(s) 87
MseI TTAA 3 cut(s) 98, 110, 161
Msp20I TGGCCA 1 cut(s) 87
NdeII GATC 3 cut(s) 25, 68, 132
NlaIII CATG 2 cut(s) 179, 216
NlaIV GGNNCC 1 cut(s) 46
NspI RCATGY 1 cut(s) 179
PciI ACATGT 1 cut(s) 175
PkrI GCNGC 1 cut(s) 145
PscI ACATGT 1 cut(s) 175
PspN4I GGNNCC 1 cut(s) 46
RsaI GTAC 2 cut(s) 66, 200
RsaNI GTAC 2 cut(s) 65, 199
SaqAI TTAA 3 cut(s) 98, 110, 161
SatI GCNGC 1 cut(s) 144
Sau3AI GATC 3 cut(s) 25, 68, 132
SetI ASST 2 cut(s) 121, 200
SfaNI GCATC 1 cut(s) 27
SgeI CNNG 7 cut(s) 35, 41, 53, 61, 159, 188, 203
Sse9I AATT 1 cut(s) 78
SspMI CTAG 1 cut(s) 41
TaaI ACNGT 2 cut(s) 104, 166
TaqI TCGA 1 cut(s) 28
TasI AATT 1 cut(s) 78
Tru1I TTAA 3 cut(s) 98, 110, 161
Tru9I TTAA 3 cut(s) 98, 110, 161
TseI GCWGC 1 cut(s) 143
XceI RCATGY 1 cut(s) 179
XspI CTAG 1 cut(s) 41
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.