pycom03g00680

Alcohol dehydrogenase GroES-like domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
N/A
Physical Location & Seq
Forward (+)
565360 .. 565732
373 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 195 bp
ATGCTTAGCAACCAGAAAGCGAGGTTTTCTATAAACGGGACTTCGACTAATCATTTTCTTGGCACATCCACCTTCGGTGAATACACTGTTGTTCATTCCGATTTGGGTGCCACTCTGAATGTGGCAAAACCAAAGAAGGATCTTCACATGTATGTAAATAATTTGGCGCAACACTTATTTTGTTTCTTATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

65

Amino Acids

7.14

Weight (kDa)

8.98

Isoelectric Point (pI)

0.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 107
AclWI GGATC 1 cut(s) 147
AflIII ACRYGT 1 cut(s) 147
AlwI GGATC 1 cut(s) 147
AspLEI GCGC 1 cut(s) 169
AsuHPI GGTGA 1 cut(s) 89
BanI GGYRCC 1 cut(s) 107
BcgI CGANNNNNNTGC 2 cut(s) 89, 123
BlpI GCTNAGC 1 cut(s) 5
BmiI GGNNCC 1 cut(s) 109
Bpu1102I GCTNAGC 1 cut(s) 5
BseGI GGATG 1 cut(s) 65
BshNI GGYRCC 1 cut(s) 107
BslFI GGGAC 1 cut(s) 52
BsmFI GGGAC 1 cut(s) 52
Bsp143I GATC 1 cut(s) 139
Bsp1720I GCTNAGC 1 cut(s) 5
BspLI GGNNCC 1 cut(s) 109
BspPI GGATC 1 cut(s) 147
BspT107I GGYRCC 1 cut(s) 107
BssMI GATC 1 cut(s) 139
Bst4CI ACNGT 1 cut(s) 88
BstDEI CTNAG 1 cut(s) 5
BstF5I GGATG 1 cut(s) 65
BstHHI GCGC 1 cut(s) 169
BstKTI GATC 1 cut(s) 142
BstMBI GATC 1 cut(s) 139
BstNSI RCATGY 1 cut(s) 151
BstX2I RGATCY 1 cut(s) 139
BstYI RGATCY 1 cut(s) 139
BtsCI GGATG 1 cut(s) 65
BtsIMutI CAGTG 1 cut(s) 84
CfoI GCGC 1 cut(s) 169
CviAII CATG 1 cut(s) 148
DdeI CTNAG 1 cut(s) 5
DpnI GATC 1 cut(s) 141
DpnII GATC 1 cut(s) 139
FaeI CATG 1 cut(s) 151
FaiI YATR 3 cut(s) 32, 149, 153
FaqI GGGAC 1 cut(s) 52
FatI CATG 1 cut(s) 147
FokI GGATG 1 cut(s) 52
GlaI GCGC 1 cut(s) 168
HhaI GCGC 1 cut(s) 169
Hin1II CATG 1 cut(s) 151
Hin6I GCGC 1 cut(s) 167
HinP1I GCGC 1 cut(s) 167
HphI GGTGA 1 cut(s) 89
Hpy188I TCNGA 2 cut(s) 100, 117
HpyAV CCTTC 2 cut(s) 82, 130
HpyCH4III ACNGT 1 cut(s) 88
HpyF3I CTNAG 1 cut(s) 5
Hsp92II CATG 1 cut(s) 151
HspAI GCGC 1 cut(s) 167
Kzo9I GATC 1 cut(s) 139
LpnPI CCDG 1 cut(s) 26
MalI GATC 1 cut(s) 141
MboI GATC 1 cut(s) 139
MboII GAAGA 1 cut(s) 134
MflI RGATCY 1 cut(s) 139
MluCI AATT 1 cut(s) 160
MnlI CCTC 1 cut(s) 15
MslI CAYNNNNRTG 1 cut(s) 150
NdeII GATC 1 cut(s) 139
NlaIII CATG 1 cut(s) 151
NlaIV GGNNCC 1 cut(s) 109
NspI RCATGY 1 cut(s) 151
PciI ACATGT 1 cut(s) 147
PscI ACATGT 1 cut(s) 147
PspN4I GGNNCC 1 cut(s) 109
PsuI RGATCY 1 cut(s) 139
RseI CAYNNNNRTG 1 cut(s) 150
Sau3AI GATC 1 cut(s) 139
SetI ASST 2 cut(s) 26, 74
SgeI CNNG 5 cut(s) 25, 33, 49, 71, 160
SmiMI CAYNNNNRTG 1 cut(s) 150
Sse9I AATT 1 cut(s) 160
TaaI ACNGT 1 cut(s) 88
TaqI TCGA 1 cut(s) 44
TasI AATT 1 cut(s) 160
TscAI CASTG 1 cut(s) 91
TspDTI ATGAA 1 cut(s) 83
TspRI CASTG 1 cut(s) 91
XceI RCATGY 1 cut(s) 151
XcmI CCANNNNNNNNNTGG 1 cut(s) 118
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.