pycom03g01230

Callose synthase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
N/A
Physical Location & Seq
Reverse (-)
966466 .. 966666
201 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 201 bp
ATGAGATTTCAAACTCAAGAATGTCAAGAAAAAACTTTACTTGAATTTTCAAAACGTCATTGTGTGGTGCGGGTGAAAGCAAATAGATTTTGTGGTATTTGTACAAATTTGCAACGCTGTCTAAAAATTGTGAAGGTTTGTCCACACTTTTTGAGGAAAGTGCAATTTTTTTATTTTTGTGAAATATTTTGTAACGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

67

Amino Acids

8.03

Weight (kDa)

9.22

Isoelectric Point (pI)

38.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 70
AcsI RAATTY 2 cut(s) 44, 106
AfaI GTAC 1 cut(s) 103
AgsI TTSAA 3 cut(s) 11, 44, 51
ApoI RAATTY 2 cut(s) 44, 106
AsuHPI GGTGA 1 cut(s) 85
Bsp1407I TGTACA 1 cut(s) 101
BspACI CCGC 1 cut(s) 70
BsrGI TGTACA 1 cut(s) 101
BstAUI TGTACA 1 cut(s) 101
Csp6I GTAC 1 cut(s) 102
CspCI CAANNNNNGTGG 2 cut(s) 132, 167
CviQI GTAC 1 cut(s) 102
FauI CCCGC 1 cut(s) 63
FspEI CC 7 cut(s) 50, 55, 56, 78, 119, 139, 156
HphI GGTGA 1 cut(s) 85
Hpy166II GTNNAC 1 cut(s) 143
Hpy188III TCNNGA 2 cut(s) 17, 26
Hpy8I GTNNAC 1 cut(s) 143
HpyAV CCTTC 1 cut(s) 127
HpyCH4IV ACGT 1 cut(s) 55
HpyCH4V TGCA 2 cut(s) 112, 163
HpySE526I ACGT 1 cut(s) 55
MaeII ACGT 1 cut(s) 55
MaeIII GTNAC 1 cut(s) 191
MluCI AATT 4 cut(s) 44, 106, 126, 164
MnlI CCTC 1 cut(s) 147
MseI TTAA 1 cut(s) 199
RsaI GTAC 1 cut(s) 103
RsaNI GTAC 1 cut(s) 102
SaqAI TTAA 1 cut(s) 199
SetI ASST 2 cut(s) 58, 138
SgeI CNNG 4 cut(s) 29, 38, 53, 83
SmlI CTYRAG 1 cut(s) 15
SmoI CTYRAG 1 cut(s) 15
Sse9I AATT 4 cut(s) 44, 106, 126, 164
SsiI CCGC 1 cut(s) 70
SspI AATATT 1 cut(s) 186
TaiI ACGT 1 cut(s) 58
TasI AATT 4 cut(s) 44, 106, 126, 164
TatI WGTACW 1 cut(s) 101
Tru1I TTAA 1 cut(s) 199
Tru9I TTAA 1 cut(s) 199
XapI RAATTY 2 cut(s) 44, 106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.