pycom03g03900

disease resistance protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
N/A
Physical Location & Seq
Forward (+)
3093595 .. 3093822
228 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 228 bp
ATGATCGATCGAGCTTTCTCCAGTAGCAGTGCTCATATAACTCTTGAATTCCAAACAATTGGAAAAGAGATTGCTAAAAATTGCGGTGGTGTTCCATTGGTGGCAAAGGTACGTAATATTATAATGTATTATAACATGGAATTTACACCTATATTTTTACATGTTTTCATTTATAATTTAGGAGAGTATTTGCATTCAACCCATGGGGTGCACCACCTTATAAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

76

Amino Acids

8.56

Weight (kDa)

7.97

Isoelectric Point (pI)

34.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 122, 132, 174, 221
AciI CCGC 1 cut(s) 84
AcsI RAATTY 2 cut(s) 47, 140
AfaI GTAC 1 cut(s) 111
AflIII ACRYGT 1 cut(s) 160
AgsI TTSAA 2 cut(s) 47, 198
AluBI AGCT 1 cut(s) 14
AluI AGCT 1 cut(s) 14
Alw21I GWGCWC 2 cut(s) 34, 213
Alw44I GTGCAC 1 cut(s) 209
ApaLI GTGCAC 1 cut(s) 209
ApoI RAATTY 2 cut(s) 47, 140
BaeGI GKGCMC 1 cut(s) 213
Bbv12I GWGCWC 2 cut(s) 34, 213
BpmI CTGGAG 1 cut(s) 4
Bsa29I ATCGAT 1 cut(s) 6
BsaAI YACGTR 1 cut(s) 113
BsaJI CCNNGG 1 cut(s) 202
Bse1I ACTGG 1 cut(s) 21
BseCI ATCGAT 1 cut(s) 6
BseDI CCNNGG 1 cut(s) 202
BseNI ACTGG 1 cut(s) 21
BseSI GKGCMC 1 cut(s) 213
Bsh1285I CGRYCG 1 cut(s) 10
BshVI ATCGAT 1 cut(s) 6
BsiEI CGRYCG 1 cut(s) 10
BsiHKAI GWGCWC 2 cut(s) 34, 213
BsmI GAATGC 1 cut(s) 193
Bsp1286I GDGCHC 2 cut(s) 34, 213
Bsp143I GATC 2 cut(s) 3, 7
Bsp19I CCATGG 1 cut(s) 202
BspACI CCGC 1 cut(s) 84
BspDI ATCGAT 1 cut(s) 6
BsrI ACTGG 1 cut(s) 21
BssECI CCNNGG 1 cut(s) 202
BssMI GATC 2 cut(s) 3, 7
BssT1I CCWWGG 1 cut(s) 202
BstBAI YACGTR 1 cut(s) 113
BstDSI CCRYGG 1 cut(s) 202
BstKTI GATC 2 cut(s) 6, 10
BstMBI GATC 2 cut(s) 3, 7
BstMCI CGRYCG 1 cut(s) 10
BstNSI RCATGY 1 cut(s) 164
BstSLI GKGCMC 1 cut(s) 213
BstSNI TACGTA 1 cut(s) 113
BstXI CCANNNNNNTGG 1 cut(s) 59
Bsu15I ATCGAT 1 cut(s) 6
BsuTUI ATCGAT 1 cut(s) 6
BtgI CCRYGG 1 cut(s) 202
BtsI GCAGTG 1 cut(s) 34
BtsIMutI CAGTG 1 cut(s) 34
ClaI ATCGAT 1 cut(s) 6
Csp6I GTAC 1 cut(s) 110
CviAII CATG 3 cut(s) 136, 161, 203
CviJI RGCY 1 cut(s) 14
CviKI_1 RGCY 1 cut(s) 14
CviQI GTAC 1 cut(s) 110
DpnI GATC 2 cut(s) 5, 9
DpnII GATC 2 cut(s) 3, 7
Eco105I TACGTA 1 cut(s) 113
Eco130I CCWWGG 1 cut(s) 202
EcoRI GAATTC 1 cut(s) 47
EcoT14I CCWWGG 1 cut(s) 202
ErhI CCWWGG 1 cut(s) 202
FaeI CATG 3 cut(s) 139, 164, 206
FatI CATG 3 cut(s) 135, 160, 202
GsuI CTGGAG 1 cut(s) 4
Hin1II CATG 3 cut(s) 139, 164, 206
Hpy166II GTNNAC 1 cut(s) 211
Hpy188III TCNNGA 1 cut(s) 44
Hpy8I GTNNAC 1 cut(s) 211
HpyCH4IV ACGT 1 cut(s) 112
HpyCH4V TGCA 2 cut(s) 193, 211
HpySE526I ACGT 1 cut(s) 112
Hsp92II CATG 3 cut(s) 139, 164, 206
Kzo9I GATC 2 cut(s) 3, 7
LpnPI CCDG 1 cut(s) 34
MaeII ACGT 1 cut(s) 112
MalI GATC 2 cut(s) 5, 9
MboI GATC 2 cut(s) 3, 7
MfeI CAATTG 1 cut(s) 57
MhlI GDGCHC 2 cut(s) 34, 213
MluCI AATT 5 cut(s) 47, 57, 79, 140, 175
MunI CAATTG 1 cut(s) 57
Mva1269I GAATGC 1 cut(s) 193
NcoI CCATGG 1 cut(s) 202
NdeII GATC 2 cut(s) 3, 7
NlaIII CATG 3 cut(s) 139, 164, 206
NspI RCATGY 1 cut(s) 164
PciI ACATGT 1 cut(s) 160
PctI GAATGC 1 cut(s) 193
Ple19I CGATCG 1 cut(s) 10
Ppu21I YACGTR 1 cut(s) 113
PscI ACATGT 1 cut(s) 160
PsiI TTATAA 4 cut(s) 122, 132, 174, 221
PvuI CGATCG 1 cut(s) 10
RsaI GTAC 1 cut(s) 111
RsaNI GTAC 1 cut(s) 110
Sau3AI GATC 2 cut(s) 3, 7
SduI GDGCHC 2 cut(s) 34, 213
SetI ASST 5 cut(s) 16, 111, 115, 151, 219
SgeI CNNG 6 cut(s) 23, 33, 56, 148, 173, 215
SnaBI TACGTA 1 cut(s) 113
Sse9I AATT 5 cut(s) 47, 57, 79, 140, 175
SsiI CCGC 1 cut(s) 84
SspI AATATT 1 cut(s) 118
StyI CCWWGG 1 cut(s) 202
TaiI ACGT 1 cut(s) 115
TaqI TCGA 2 cut(s) 6, 10
TasI AATT 5 cut(s) 47, 57, 79, 140, 175
TscAI CASTG 1 cut(s) 34
TspDTI ATGAA 1 cut(s) 157
TspRI CASTG 1 cut(s) 34
VneI GTGCAC 1 cut(s) 209
XapI RAATTY 2 cut(s) 47, 140
XceI RCATGY 1 cut(s) 164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.