Pentatricopeptide repeat-containing protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PPR_2 | PF13041 | 21 - 62 | 5.1e-08 | PPR repeat family |
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No orthologs found for this gene in the current database.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 35 |
| AcsI | RAATTY | 1 cut(s) | 111 |
| AfaI | GTAC | 1 cut(s) | 241 |
| AflIII | ACRYGT | 1 cut(s) | 21 |
| AgsI | TTSAA | 1 cut(s) | 223 |
| AluBI | AGCT | 1 cut(s) | 104 |
| AluI | AGCT | 1 cut(s) | 104 |
| AoxI | GGCC | 1 cut(s) | 73 |
| ApoI | RAATTY | 1 cut(s) | 111 |
| AspA2I | CCTAGG | 1 cut(s) | 253 |
| AsuC2I | CCSGG | 1 cut(s) | 45 |
| AvrII | CCTAGG | 1 cut(s) | 253 |
| BcnI | CCSGG | 1 cut(s) | 45 |
| BfaI | CTAG | 3 cut(s) | 197, 254, 277 |
| BlnI | CCTAGG | 1 cut(s) | 253 |
| Bme1390I | CCNGG | 1 cut(s) | 45 |
| BmrFI | CCNGG | 1 cut(s) | 45 |
| BpuMI | CCSGG | 1 cut(s) | 45 |
| BsaJI | CCNNGG | 2 cut(s) | 44, 253 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 183, 213 |
| Bse3DI | GCAATG | 1 cut(s) | 87 |
| BseDI | CCNNGG | 2 cut(s) | 44, 253 |
| BseMI | GCAATG | 1 cut(s) | 87 |
| BseMII | CTCAG | 1 cut(s) | 164 |
| BshFI | GGCC | 1 cut(s) | 75 |
| BsiSI | CCGG | 2 cut(s) | 44, 72 |
| BslFI | GGGAC | 1 cut(s) | 61 |
| BsmFI | GGGAC | 1 cut(s) | 61 |
| BsnI | GGCC | 1 cut(s) | 75 |
| Bsp143I | GATC | 2 cut(s) | 66, 245 |
| BspANI | GGCC | 1 cut(s) | 75 |
| BspCNI | CTCAG | 1 cut(s) | 165 |
| BsrDI | GCAATG | 1 cut(s) | 87 |
| BssECI | CCNNGG | 2 cut(s) | 44, 253 |
| BssMI | GATC | 2 cut(s) | 66, 245 |
| BssT1I | CCWWGG | 1 cut(s) | 253 |
| Bst4CI | ACNGT | 1 cut(s) | 58 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 216 |
| BstDEI | CTNAG | 2 cut(s) | 163, 173 |
| BstKTI | GATC | 2 cut(s) | 69, 248 |
| BstMBI | GATC | 2 cut(s) | 66, 245 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 216 |
| BstNSI | RCATGY | 1 cut(s) | 25 |
| BstSCI | CCNGG | 1 cut(s) | 43 |
| BsuRI | GGCC | 1 cut(s) | 75 |
| Csp6I | GTAC | 1 cut(s) | 240 |
| CviAII | CATG | 6 cut(s) | 10, 22, 124, 188, 228, 249 |
| CviJI | RGCY | 5 cut(s) | 75, 91, 104, 145, 272 |
| CviKI_1 | RGCY | 5 cut(s) | 75, 91, 104, 145, 272 |
| CviQI | GTAC | 1 cut(s) | 240 |
| DdeI | CTNAG | 2 cut(s) | 163, 173 |
| DpnI | GATC | 2 cut(s) | 68, 247 |
| DpnII | GATC | 2 cut(s) | 66, 245 |
| DraI | TTTAAA | 1 cut(s) | 18 |
| Eco130I | CCWWGG | 1 cut(s) | 253 |
| EcoT14I | CCWWGG | 1 cut(s) | 253 |
| ErhI | CCWWGG | 1 cut(s) | 253 |
| FaeI | CATG | 6 cut(s) | 13, 25, 127, 191, 231, 252 |
| FaiI | YATR | 9 cut(s) | 11, 23, 35, 61, 65, 125, 189, 229, 250 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 203, 235 |
| FaqI | GGGAC | 1 cut(s) | 61 |
| FatI | CATG | 6 cut(s) | 9, 21, 123, 187, 227, 248 |
| FspBI | CTAG | 3 cut(s) | 197, 254, 277 |
| HaeIII | GGCC | 1 cut(s) | 75 |
| HapII | CCGG | 2 cut(s) | 44, 72 |
| Hin1II | CATG | 6 cut(s) | 13, 25, 127, 191, 231, 252 |
| HinfI | GANTC | 1 cut(s) | 258 |
| HpaII | CCGG | 2 cut(s) | 44, 72 |
| Hpy188III | TCNNGA | 1 cut(s) | 107 |
| HpyCH4III | ACNGT | 1 cut(s) | 58 |
| HpyCH4V | TGCA | 3 cut(s) | 80, 85, 231 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 216 |
| HpyF3I | CTNAG | 2 cut(s) | 163, 173 |
| Hsp92II | CATG | 6 cut(s) | 13, 25, 127, 191, 231, 252 |
| Kzo9I | GATC | 2 cut(s) | 66, 245 |
| LpnPI | CCDG | 5 cut(s) | 57, 85, 92, 159, 217 |
| MaeI | CTAG | 3 cut(s) | 197, 254, 277 |
| MalI | GATC | 2 cut(s) | 68, 247 |
| MboI | GATC | 2 cut(s) | 66, 245 |
| MluCI | AATT | 2 cut(s) | 111, 167 |
| MnlI | CCTC | 2 cut(s) | 185, 199 |
| MseI | TTAA | 2 cut(s) | 17, 201 |
| MspI | CCGG | 2 cut(s) | 44, 72 |
| MspR9I | CCNGG | 1 cut(s) | 45 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 216 |
| NciI | CCSGG | 1 cut(s) | 45 |
| NdeII | GATC | 2 cut(s) | 66, 245 |
| NlaIII | CATG | 6 cut(s) | 13, 25, 127, 191, 231, 252 |
| NspI | RCATGY | 1 cut(s) | 25 |
| PciI | ACATGT | 1 cut(s) | 21 |
| PfeI | GAWTC | 1 cut(s) | 258 |
| PscI | ACATGT | 1 cut(s) | 21 |
| PsiI | TTATAA | 1 cut(s) | 35 |
| RsaI | GTAC | 1 cut(s) | 241 |
| RsaNI | GTAC | 1 cut(s) | 240 |
| SaqAI | TTAA | 2 cut(s) | 17, 201 |
| Sau3AI | GATC | 2 cut(s) | 66, 245 |
| ScrFI | CCNGG | 1 cut(s) | 45 |
| SetI | ASST | 2 cut(s) | 106, 196 |
| Sse9I | AATT | 2 cut(s) | 111, 167 |
| SspMI | CTAG | 3 cut(s) | 197, 254, 277 |
| StyD4I | CCNGG | 1 cut(s) | 43 |
| StyI | CCWWGG | 1 cut(s) | 253 |
| TaaI | ACNGT | 1 cut(s) | 58 |
| TasI | AATT | 2 cut(s) | 111, 167 |
| TatI | WGTACW | 1 cut(s) | 239 |
| TfiI | GAWTC | 1 cut(s) | 258 |
| Tru1I | TTAA | 2 cut(s) | 17, 201 |
| Tru9I | TTAA | 2 cut(s) | 17, 201 |
| TspDTI | ATGAA | 2 cut(s) | 140, 165 |
| XapI | RAATTY | 1 cut(s) | 111 |
| XceI | RCATGY | 1 cut(s) | 25 |
| XmaJI | CCTAGG | 1 cut(s) | 253 |
| XspI | CTAG | 3 cut(s) | 197, 254, 277 |