pycom03g17870

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
N/A
Physical Location & Seq
Forward (+)
18954918 .. 18958085
3168 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 516 bp
ATGGATGATGCAGCAGCTTTGGCAGAGGCTGCAGGATCAAGATTTAGTTCATTGGAGCTAATTGGAAGAGGATCGTTTGGCGATGTGTACAAAGCGTTTGATAAGGAGCTTAACAAGGAAGTTGCAATTAAAGTAATTGATTTGGAAGAATCAGAGGATGAGATTGAGGATATTCAGAAGTTCAGTTTTGTCACAATGTCGATCGATCCTTATATTACAGAGTACTACGGTTCCTATCTCCACCAGACAAAACTTTGGATAATAATGGAGTACATGGCCGGTGGCTCTGTTGCTGACCTACTCCAATCAGGTCCTCCACTGGATGAAACGTCAATGGCATGTATTCTTCGTGACTTGCTACATGCAATTGAATATTTACATAATGAAGGAAAAATTCACAGAGATATTAAAGCGGCAAACATTTTATTGACAGAAAATGGCGATGTTAAGGTGGCCGATTTTGGTGTTTCCGCACAACTTACAAGGACAATATCAAGGAGGAAGGTACATTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

172

Amino Acids

19.09

Weight (kDa)

4.76

Isoelectric Point (pI)

50.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 16 - 164 7e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 18 - 162 3.3e-29 Protein tyrosine and serine/threonine kinase
ABC1 PF03109 85 - 165 2.8e-06 ABC1 atypical kinase-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 413, 471
AclWI GGATC 3 cut(s) 43, 79, 200
AcoI YGGCCR 2 cut(s) 276, 453
AcsI RAATTY 1 cut(s) 393
AfaI GTAC 4 cut(s) 89, 224, 272, 507
AgsI TTSAA 1 cut(s) 371
AluBI AGCT 3 cut(s) 17, 58, 109
AluI AGCT 3 cut(s) 17, 58, 109
AlwI GGATC 3 cut(s) 43, 79, 200
AlwNI CAGNNNCTG 1 cut(s) 29
AoxI GGCC 2 cut(s) 276, 453
ApeKI GCWGC 3 cut(s) 11, 14, 29
ApoI RAATTY 1 cut(s) 393
AspS9I GGNCC 1 cut(s) 311
AvaII GGWCC 1 cut(s) 311
BaeI ACNNNNGTAYC 1 cut(s) 497
BbvI GCAGC 3 cut(s) 16, 23, 26
BfmI CTRYAG 1 cut(s) 30
BisI GCNGC 4 cut(s) 12, 15, 30, 414
BlsI GCNGC 4 cut(s) 13, 16, 31, 415
BmcAI AGTACT 1 cut(s) 224
Bme18I GGWCC 1 cut(s) 311
BmgT120I GGNCC 1 cut(s) 311
BmiI GGNNCC 1 cut(s) 232
Bsa29I ATCGAT 1 cut(s) 204
Bse118I RCCGGY 1 cut(s) 278
Bse1I ACTGG 1 cut(s) 324
BseCI ATCGAT 1 cut(s) 204
BseGI GGATG 3 cut(s) 10, 163, 328
BseNI ACTGG 1 cut(s) 324
BseXI GCAGC 3 cut(s) 16, 23, 26
Bsh1285I CGRYCG 1 cut(s) 204
BshFI GGCC 2 cut(s) 278, 455
BshVI ATCGAT 1 cut(s) 204
BsiEI CGRYCG 1 cut(s) 204
BsiSI CCGG 1 cut(s) 279
BsnI GGCC 2 cut(s) 278, 455
Bsp1407I TGTACA 1 cut(s) 87
Bsp143I GATC 4 cut(s) 35, 71, 201, 205
BspACI CCGC 2 cut(s) 413, 471
BspANI GGCC 2 cut(s) 278, 455
BspDI ATCGAT 1 cut(s) 204
BspLI GGNNCC 1 cut(s) 232
BspMAI CTGCAG 1 cut(s) 34
BspPI GGATC 3 cut(s) 43, 79, 200
BsrFI RCCGGY 1 cut(s) 278
BsrGI TGTACA 1 cut(s) 87
BsrI ACTGG 1 cut(s) 324
BssAI RCCGGY 1 cut(s) 278
BssMI GATC 4 cut(s) 35, 71, 201, 205
Bst4CI ACNGT 1 cut(s) 230
Bst6I CTCTTC 1 cut(s) 61
BstAPI GCANNNNNTGC 1 cut(s) 29
BstAUI TGTACA 1 cut(s) 87
BstF5I GGATG 3 cut(s) 10, 163, 328
BstKTI GATC 4 cut(s) 38, 74, 204, 208
BstMBI GATC 4 cut(s) 35, 71, 201, 205
BstMCI CGRYCG 1 cut(s) 204
BstMWI GCNNNNNNNGC 2 cut(s) 20, 29
BstNSI RCATGY 2 cut(s) 342, 365
BstSFI CTRYAG 1 cut(s) 30
BstV1I GCAGC 3 cut(s) 16, 23, 26
Bsu15I ATCGAT 1 cut(s) 204
BsuRI GGCC 2 cut(s) 278, 455
BsuTUI ATCGAT 1 cut(s) 204
BtgZI GCGATG 2 cut(s) 96, 456
BtsCI GGATG 3 cut(s) 10, 163, 328
BtsIMutI CAGTG 1 cut(s) 317
CaiI CAGNNNCTG 1 cut(s) 29
Cfr10I RCCGGY 1 cut(s) 278
Cfr13I GGNCC 1 cut(s) 311
ClaI ATCGAT 1 cut(s) 204
Csp6I GTAC 4 cut(s) 88, 223, 271, 506
CviAII CATG 3 cut(s) 274, 339, 362
CviJI RGCY 7 cut(s) 17, 29, 58, 109, 278, 285, 455
CviKI_1 RGCY 7 cut(s) 17, 29, 58, 109, 278, 285, 455
CviQI GTAC 4 cut(s) 88, 223, 271, 506
DpnI GATC 4 cut(s) 37, 73, 203, 207
DpnII GATC 4 cut(s) 35, 71, 201, 205
EaeI YGGCCR 2 cut(s) 276, 453
Eam1104I CTCTTC 1 cut(s) 61
EarI CTCTTC 1 cut(s) 61
Eco47I GGWCC 1 cut(s) 311
EcoO109I RGGNCCY 1 cut(s) 311
FaeI CATG 3 cut(s) 277, 342, 365
FaiI YATR 5 cut(s) 213, 275, 340, 363, 381
FatI CATG 3 cut(s) 273, 338, 361
Fnu4HI GCNGC 4 cut(s) 12, 15, 30, 414
FokI GGATG 3 cut(s) 17, 170, 335
Fsp4HI GCNGC 4 cut(s) 12, 15, 30, 414
GluI GCNGC 4 cut(s) 12, 15, 30, 414
HaeIII GGCC 2 cut(s) 278, 455
HapII CCGG 1 cut(s) 279
Hin1II CATG 3 cut(s) 277, 342, 365
HinfI GANTC 1 cut(s) 149
HpaII CCGG 1 cut(s) 279
Hpy166II GTNNAC 1 cut(s) 88
Hpy188I TCNGA 2 cut(s) 154, 177
Hpy188III TCNNGA 2 cut(s) 39, 350
Hpy8I GTNNAC 1 cut(s) 88
HpyAV CCTTC 2 cut(s) 380, 496
HpyCH4III ACNGT 1 cut(s) 230
HpyCH4IV ACGT 1 cut(s) 329
HpyCH4V TGCA 4 cut(s) 11, 32, 125, 365
HpyF10VI GCNNNNNNNGC 2 cut(s) 20, 29
HpySE526I ACGT 1 cut(s) 329
Hsp92II CATG 3 cut(s) 277, 342, 365
Kzo9I GATC 4 cut(s) 35, 71, 201, 205
LmnI GCTCC 2 cut(s) 55, 106
LpnPI CCDG 5 cut(s) 18, 257, 292, 294, 305
Lsp1109I GCAGC 3 cut(s) 16, 23, 26
MaeII ACGT 1 cut(s) 329
MaeIII GTNAC 2 cut(s) 190, 350
MalI GATC 4 cut(s) 37, 73, 203, 207
MboI GATC 4 cut(s) 35, 71, 201, 205
MboII GAAGA 3 cut(s) 78, 158, 338
MfeI CAATTG 1 cut(s) 366
MluCI AATT 5 cut(s) 60, 126, 135, 366, 393
MnlI CCTC 6 cut(s) 19, 62, 148, 160, 324, 492
MseI TTAA 4 cut(s) 111, 129, 408, 447
MspI CCGG 1 cut(s) 279
MunI CAATTG 1 cut(s) 366
MwoI GCNNNNNNNGC 2 cut(s) 20, 29
NdeII GATC 4 cut(s) 35, 71, 201, 205
NlaIII CATG 3 cut(s) 277, 342, 365
NlaIV GGNNCC 1 cut(s) 232
NmuCI GTSAC 2 cut(s) 190, 350
NspI RCATGY 2 cut(s) 342, 365
PfeI GAWTC 1 cut(s) 149
PkrI GCNGC 4 cut(s) 13, 16, 31, 415
Ple19I CGATCG 1 cut(s) 204
PpuMI RGGWCCY 1 cut(s) 311
Psp5II RGGWCCY 1 cut(s) 311
PspN4I GGNNCC 1 cut(s) 232
PspPI GGNCC 1 cut(s) 311
PspPPI RGGWCCY 1 cut(s) 311
PstI CTGCAG 1 cut(s) 34
PstNI CAGNNNCTG 1 cut(s) 29
PvuI CGATCG 1 cut(s) 204
RsaI GTAC 4 cut(s) 89, 224, 272, 507
RsaNI GTAC 4 cut(s) 88, 223, 271, 506
SaqAI TTAA 4 cut(s) 111, 129, 408, 447
SatI GCNGC 4 cut(s) 12, 15, 30, 414
Sau3AI GATC 4 cut(s) 35, 71, 201, 205
Sau96I GGNCC 1 cut(s) 311
ScaI AGTACT 1 cut(s) 224
SetI ASST 8 cut(s) 19, 60, 111, 300, 313, 332, 453, 507
SfcI CTRYAG 1 cut(s) 30
SinI GGWCC 1 cut(s) 311
Sse9I AATT 5 cut(s) 60, 126, 135, 366, 393
SsiI CCGC 2 cut(s) 413, 471
SspI AATATT 1 cut(s) 374
TaaI ACNGT 1 cut(s) 230
TaiI ACGT 1 cut(s) 332
TaqI TCGA 2 cut(s) 200, 204
TasI AATT 5 cut(s) 60, 126, 135, 366, 393
TatI WGTACW 3 cut(s) 87, 222, 270
TauI GCSGC 1 cut(s) 416
TfiI GAWTC 1 cut(s) 149
Tru1I TTAA 4 cut(s) 111, 129, 408, 447
Tru9I TTAA 4 cut(s) 111, 129, 408, 447
TscAI CASTG 1 cut(s) 324
TseFI GTSAC 2 cut(s) 190, 350
TseI GCWGC 3 cut(s) 11, 14, 29
Tsp45I GTSAC 2 cut(s) 190, 350
TspDTI ATGAA 3 cut(s) 39, 339, 399
TspRI CASTG 1 cut(s) 324
VpaK11BI GGWCC 1 cut(s) 311
XapI RAATTY 1 cut(s) 393
XceI RCATGY 2 cut(s) 342, 365
ZrmI AGTACT 1 cut(s) 224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.