FHA domain-containing protein At4g14490-like
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No orthologs found for this gene in the current database.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 5 cut(s) | 692, 1611, 2363, 2406, 2450 |
| AatII | GACGTC | 2 cut(s) | 1257, 1807 |
| AccI | GTMKAC | 3 cut(s) | 387, 2476, 2500 |
| AccII | CGCG | 3 cut(s) | 1839, 1854, 1856 |
| AciI | CCGC | 5 cut(s) | 531, 1533, 1880, 1887, 2466 |
| AclI | AACGTT | 2 cut(s) | 521, 915 |
| AclWI | GGATC | 4 cut(s) | 929, 1406, 1419, 2317 |
| AcsI | RAATTY | 8 cut(s) | 310, 318, 805, 1352, 1579, 2020, 2352, 2575 |
| AcuI | CTGAAG | 1 cut(s) | 85 |
| AcvI | CACGTG | 2 cut(s) | 1925, 1998 |
| AcyI | GRCGYC | 2 cut(s) | 1254, 1804 |
| AfaI | GTAC | 6 cut(s) | 367, 1011, 1280, 1993, 2200, 2342 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1123, 1712 |
| AflIII | ACRYGT | 1 cut(s) | 905 |
| AjnI | CCWGG | 3 cut(s) | 184, 1555, 1722 |
| AleI | CACNNNNGTG | 2 cut(s) | 1061, 1636 |
| Alw21I | GWGCWC | 3 cut(s) | 199, 994, 1768 |
| AlwI | GGATC | 4 cut(s) | 929, 1406, 1419, 2317 |
| AoxI | GGCC | 6 cut(s) | 281, 1670, 1679, 1720, 1726, 1883 |
| ApaI | GGGCCC | 1 cut(s) | 1887 |
| ApeKI | GCWGC | 3 cut(s) | 109, 170, 588 |
| ApoI | RAATTY | 8 cut(s) | 310, 318, 805, 1352, 1579, 2020, 2352, 2575 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 126, 158 |
| AseI | ATTAAT | 2 cut(s) | 738, 2327 |
| AspLEI | GCGC | 4 cut(s) | 170, 1839, 1854, 1856 |
| AspS9I | GGNCC | 7 cut(s) | 1670, 1693, 1726, 1883, 1884, 1969, 2596 |
| AsuC2I | CCSGG | 1 cut(s) | 1742 |
| AsuHPI | GGTGA | 1 cut(s) | 1077 |
| AsuNHI | GCTAGC | 1 cut(s) | 1102 |
| AvaII | GGWCC | 3 cut(s) | 1693, 1969, 2596 |
| BaeGI | GKGCMC | 1 cut(s) | 1887 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1975, 2008 |
| BamHI | GGATCC | 1 cut(s) | 1411 |
| BanII | GRGCYC | 2 cut(s) | 1768, 1887 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 549, 581 |
| BbrPI | CACGTG | 2 cut(s) | 1925, 1998 |
| BbsI | GAAGAC | 1 cut(s) | 832 |
| Bbv12I | GWGCWC | 3 cut(s) | 199, 994, 1768 |
| BbvI | GCAGC | 3 cut(s) | 96, 182, 600 |
| BccI | CCATC | 2 cut(s) | 1328, 1655 |
| BceAI | ACGGC | 1 cut(s) | 688 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 823, 857, 1719, 1753, 2155, 2189 |
| BciT130I | CCWGG | 3 cut(s) | 186, 1557, 1724 |
| BcnI | CCSGG | 1 cut(s) | 1742 |
| BfaI | CTAG | 3 cut(s) | 1103, 1575, 1584 |
| BfmI | CTRYAG | 2 cut(s) | 110, 547 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1678 |
| BisI | GCNGC | 3 cut(s) | 110, 171, 589 |
| BlpI | GCTNAGC | 1 cut(s) | 1170 |
| BlsI | GCNGC | 3 cut(s) | 111, 172, 590 |
| Bme1390I | CCNGG | 4 cut(s) | 186, 1557, 1724, 1742 |
| Bme18I | GGWCC | 3 cut(s) | 1693, 1969, 2596 |
| BmgT120I | GGNCC | 7 cut(s) | 1670, 1693, 1726, 1883, 1884, 1969, 2596 |
| BmiI | GGNNCC | 4 cut(s) | 1413, 1884, 1885, 2598 |
| BmrFI | CCNGG | 4 cut(s) | 186, 1557, 1724, 1742 |
| BmrI | ACTGGG | 3 cut(s) | 1503, 1642, 1665 |
| BmsI | GCATC | 3 cut(s) | 309, 2146, 2163 |
| BmtI | GCTAGC | 1 cut(s) | 1106 |
| BmuI | ACTGGG | 3 cut(s) | 1503, 1642, 1665 |
| BpiI | GAAGAC | 1 cut(s) | 832 |
| BpmI | CTGGAG | 1 cut(s) | 2030 |
| Bpu10I | CCTNAGC | 1 cut(s) | 613 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1170 |
| BpuEI | CTTGAG | 2 cut(s) | 183, 661 |
| BpuMI | CCSGG | 1 cut(s) | 1742 |
| Bsa29I | ATCGAT | 1 cut(s) | 2280 |
| BsaAI | YACGTR | 3 cut(s) | 1814, 1925, 1998 |
| BsaHI | GRCGYC | 2 cut(s) | 1254, 1804 |
| BsaJI | CCNNGG | 7 cut(s) | 28, 185, 1634, 1682, 1711, 1723, 2272 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1123, 1712 |
| Bse3DI | GCAATG | 1 cut(s) | 841 |
| BseBI | CCWGG | 3 cut(s) | 186, 1557, 1724 |
| BseCI | ATCGAT | 1 cut(s) | 2280 |
| BseDI | CCNNGG | 7 cut(s) | 28, 185, 1634, 1682, 1711, 1723, 2272 |
| BseGI | GGATG | 4 cut(s) | 246, 539, 1666, 2178 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1123, 1712 |
| BseMI | GCAATG | 1 cut(s) | 841 |
| BseMII | CTCAG | 2 cut(s) | 1751, 1972 |
| BsePI | GCGCGC | 1 cut(s) | 1852 |
| BseRI | GAGGAG | 1 cut(s) | 1456 |
| BseSI | GKGCMC | 1 cut(s) | 1887 |
| BseXI | GCAGC | 3 cut(s) | 96, 182, 600 |
| BsgI | GTGCAG | 1 cut(s) | 1039 |
| Bsh1236I | CGCG | 3 cut(s) | 1839, 1854, 1856 |
| BshFI | GGCC | 6 cut(s) | 283, 1672, 1681, 1722, 1728, 1885 |
| BshVI | ATCGAT | 1 cut(s) | 2280 |
| BsiHKAI | GWGCWC | 3 cut(s) | 199, 994, 1768 |
| BsiSI | CCGG | 1 cut(s) | 1742 |
| BslFI | GGGAC | 2 cut(s) | 1729, 2582 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1123, 1712 |
| BsmFI | GGGAC | 2 cut(s) | 1729, 2582 |
| BsmI | GAATGC | 2 cut(s) | 209, 1894 |
| BsnI | GGCC | 6 cut(s) | 283, 1672, 1681, 1722, 1728, 1885 |
| Bsp120I | GGGCCC | 1 cut(s) | 1883 |
| Bsp1286I | GDGCHC | 4 cut(s) | 199, 994, 1768, 1887 |
| Bsp1407I | TGTACA | 1 cut(s) | 1278 |
| Bsp143I | GATC | 4 cut(s) | 921, 1382, 1411, 2309 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1170 |
| Bsp19I | CCATGG | 2 cut(s) | 28, 1634 |
| BspACI | CCGC | 5 cut(s) | 531, 1533, 1880, 1887, 2466 |
| BspANI | GGCC | 6 cut(s) | 283, 1672, 1681, 1722, 1728, 1885 |
| BspCNI | CTCAG | 2 cut(s) | 1752, 1971 |
| BspDI | ATCGAT | 1 cut(s) | 2280 |
| BspFNI | CGCG | 3 cut(s) | 1839, 1854, 1856 |
| BspHI | TCATGA | 1 cut(s) | 2609 |
| BspLI | GGNNCC | 4 cut(s) | 1413, 1884, 1885, 2598 |
| BspMAI | CTGCAG | 1 cut(s) | 114 |
| BspOI | GCTAGC | 1 cut(s) | 1106 |
| BspPI | GGATC | 4 cut(s) | 929, 1406, 1419, 2317 |
| BsrDI | GCAATG | 1 cut(s) | 841 |
| BsrGI | TGTACA | 1 cut(s) | 1278 |
| BssECI | CCNNGG | 7 cut(s) | 28, 185, 1634, 1682, 1711, 1723, 2272 |
| BssHII | GCGCGC | 1 cut(s) | 1852 |
| BssMI | GATC | 4 cut(s) | 921, 1382, 1411, 2309 |
| BssNAI | GTATAC | 2 cut(s) | 388, 2501 |
| BssNI | GRCGYC | 2 cut(s) | 1254, 1804 |
| BssT1I | CCWWGG | 4 cut(s) | 28, 1634, 1711, 2272 |
| Bst1107I | GTATAC | 2 cut(s) | 388, 2501 |
| Bst2UI | CCWGG | 3 cut(s) | 186, 1557, 1724 |
| Bst4CI | ACNGT | 5 cut(s) | 548, 556, 1912, 1969, 1988 |
| BstACI | GRCGYC | 2 cut(s) | 1254, 1804 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1751 |
| BstAUI | TGTACA | 1 cut(s) | 1278 |
| BstBAI | YACGTR | 3 cut(s) | 1814, 1925, 1998 |
| BstC8I | GCNNGC | 6 cut(s) | 107, 1104, 1707, 1756, 1854, 1887 |
| BstDEI | CTNAG | 6 cut(s) | 613, 618, 986, 1170, 1760, 1958 |
| BstDSI | CCRYGG | 2 cut(s) | 28, 1634 |
| BstF5I | GGATG | 4 cut(s) | 246, 539, 1666, 2178 |
| BstFNI | CGCG | 3 cut(s) | 1839, 1854, 1856 |
| BstHHI | GCGC | 4 cut(s) | 170, 1839, 1854, 1856 |
| BstKTI | GATC | 4 cut(s) | 924, 1385, 1414, 2312 |
| BstMBI | GATC | 4 cut(s) | 921, 1382, 1411, 2309 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 1099, 1678, 1751, 1795, 1851, 1886, 1891 |
| BstNI | CCWGG | 3 cut(s) | 186, 1557, 1724 |
| BstNSI | RCATGY | 3 cut(s) | 902, 909, 1740 |
| BstSCI | CCNGG | 4 cut(s) | 184, 1555, 1722, 1740 |
| BstSFI | CTRYAG | 2 cut(s) | 110, 547 |
| BstSLI | GKGCMC | 1 cut(s) | 1887 |
| BstUI | CGCG | 3 cut(s) | 1839, 1854, 1856 |
| BstV1I | GCAGC | 3 cut(s) | 96, 182, 600 |
| BstV2I | GAAGAC | 1 cut(s) | 832 |
| BstX2I | RGATCY | 1 cut(s) | 1411 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1655 |
| BstYI | RGATCY | 1 cut(s) | 1411 |
| BstZ17I | GTATAC | 2 cut(s) | 388, 2501 |
| Bsu15I | ATCGAT | 1 cut(s) | 2280 |
| BsuRI | GGCC | 6 cut(s) | 283, 1672, 1681, 1722, 1728, 1885 |
| BsuTUI | ATCGAT | 1 cut(s) | 2280 |
| BtgI | CCRYGG | 2 cut(s) | 28, 1634 |
| BtsCI | GGATG | 4 cut(s) | 246, 539, 1666, 2178 |
| BtsIMutI | CAGTG | 2 cut(s) | 1516, 1655 |
| Cac8I | GCNNGC | 6 cut(s) | 107, 1104, 1707, 1756, 1854, 1887 |
| CciI | TCATGA | 1 cut(s) | 2609 |
| CfoI | GCGC | 4 cut(s) | 170, 1839, 1854, 1856 |
| Cfr13I | GGNCC | 7 cut(s) | 1670, 1693, 1726, 1883, 1884, 1969, 2596 |
| ClaI | ATCGAT | 1 cut(s) | 2280 |
| CseI | GACGC | 2 cut(s) | 1790, 1845 |
| Csp6I | GTAC | 6 cut(s) | 366, 1010, 1279, 1992, 2199, 2341 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2202, 2237 |
| CviQI | GTAC | 6 cut(s) | 366, 1010, 1279, 1992, 2199, 2341 |
| DdeI | CTNAG | 6 cut(s) | 613, 618, 986, 1170, 1760, 1958 |
| DpnI | GATC | 4 cut(s) | 923, 1384, 1413, 2311 |
| DpnII | GATC | 4 cut(s) | 921, 1382, 1411, 2309 |
| DraI | TTTAAA | 5 cut(s) | 315, 634, 708, 1024, 1180 |
| EciI | GGCGGA | 1 cut(s) | 1548 |
| Ecl136II | GAGCTC | 1 cut(s) | 1766 |
| Eco130I | CCWWGG | 4 cut(s) | 28, 1634, 1711, 2272 |
| Eco24I | GRGCYC | 2 cut(s) | 1768, 1887 |
| Eco47I | GGWCC | 3 cut(s) | 1693, 1969, 2596 |
| Eco53kI | GAGCTC | 1 cut(s) | 1766 |
| Eco57I | CTGAAG | 1 cut(s) | 85 |
| Eco72I | CACGTG | 2 cut(s) | 1925, 1998 |
| EcoICRI | GAGCTC | 1 cut(s) | 1766 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1883 |
| EcoRI | GAATTC | 1 cut(s) | 2020 |
| EcoRII | CCWGG | 3 cut(s) | 184, 1555, 1722 |
| EcoT14I | CCWWGG | 4 cut(s) | 28, 1634, 1711, 2272 |
| EcoT22I | ATGCAT | 1 cut(s) | 879 |
| EcoT38I | GRGCYC | 2 cut(s) | 1768, 1887 |
| ErhI | CCWWGG | 4 cut(s) | 28, 1634, 1711, 2272 |
| FaqI | GGGAC | 2 cut(s) | 1729, 2582 |
| FauI | CCCGC | 3 cut(s) | 1873, 1894, 2473 |
| FblI | GTMKAC | 3 cut(s) | 387, 2476, 2500 |
| Fnu4HI | GCNGC | 3 cut(s) | 110, 171, 589 |
| FokI | GGATG | 4 cut(s) | 233, 546, 1673, 2185 |
| FriOI | GRGCYC | 2 cut(s) | 1768, 1887 |
| Fsp4HI | GCNGC | 3 cut(s) | 110, 171, 589 |
| FspBI | CTAG | 3 cut(s) | 1103, 1575, 1584 |
| GlaI | GCGC | 4 cut(s) | 169, 1838, 1853, 1855 |
| GluI | GCNGC | 3 cut(s) | 110, 171, 589 |
| GsuI | CTGGAG | 1 cut(s) | 2030 |
| HaeIII | GGCC | 6 cut(s) | 283, 1672, 1681, 1722, 1728, 1885 |
| HapII | CCGG | 1 cut(s) | 1742 |
| HgaI | GACGC | 2 cut(s) | 1790, 1845 |
| HhaI | GCGC | 4 cut(s) | 170, 1839, 1854, 1856 |
| Hin1I | GRCGYC | 2 cut(s) | 1254, 1804 |
| Hin6I | GCGC | 4 cut(s) | 168, 1837, 1852, 1854 |
| HinP1I | GCGC | 4 cut(s) | 168, 1837, 1852, 1854 |
| HincII | GTYRAC | 1 cut(s) | 1808 |
| HindII | GTYRAC | 1 cut(s) | 1808 |
| HinfI | GANTC | 7 cut(s) | 540, 942, 1347, 1571, 1591, 2225, 2277 |
| HpaII | CCGG | 1 cut(s) | 1742 |
| HphI | GGTGA | 1 cut(s) | 1077 |
| Hpy188I | TCNGA | 8 cut(s) | 912, 921, 1403, 1864, 1876, 1900, 1961, 2581 |
| Hpy188III | TCNNGA | 7 cut(s) | 572, 1246, 1409, 1575, 1584, 2009, 2610 |
| Hpy99I | CGWCG | 1 cut(s) | 1861 |
| HpyAV | CCTTC | 3 cut(s) | 1243, 1581, 2408 |
| HpyCH4III | ACNGT | 5 cut(s) | 548, 556, 1912, 1969, 1988 |
| HpyCH4IV | ACGT | 9 cut(s) | 521, 915, 1254, 1368, 1804, 1813, 1924, 1974, 1997 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 1099, 1678, 1751, 1795, 1851, 1886, 1891 |
| HpyF3I | CTNAG | 6 cut(s) | 613, 618, 986, 1170, 1760, 1958 |
| HpySE526I | ACGT | 9 cut(s) | 521, 915, 1254, 1368, 1804, 1813, 1924, 1974, 1997 |
| Hsp92I | GRCGYC | 2 cut(s) | 1254, 1804 |
| HspAI | GCGC | 4 cut(s) | 168, 1837, 1852, 1854 |
| Kzo9I | GATC | 4 cut(s) | 921, 1382, 1411, 2309 |
| LmnI | GCTCC | 3 cut(s) | 29, 1054, 1469 |
| Lsp1109I | GCAGC | 3 cut(s) | 96, 182, 600 |
| LweI | GCATC | 3 cut(s) | 309, 2146, 2163 |
| MaeI | CTAG | 3 cut(s) | 1103, 1575, 1584 |
| MaeII | ACGT | 9 cut(s) | 521, 915, 1254, 1368, 1804, 1813, 1924, 1974, 1997 |
| MaeIII | GTNAC | 9 cut(s) | 83, 430, 856, 1732, 1906, 1982, 2161, 2315, 2432 |
| MalI | GATC | 4 cut(s) | 923, 1384, 1413, 2311 |
| MboI | GATC | 4 cut(s) | 921, 1382, 1411, 2309 |
| MboII | GAAGA | 9 cut(s) | 455, 557, 560, 832, 842, 1390, 1426, 2042, 2195 |
| MflI | RGATCY | 1 cut(s) | 1411 |
| MhlI | GDGCHC | 4 cut(s) | 199, 994, 1768, 1887 |
| MlyI | GAGTC | 3 cut(s) | 936, 1565, 2234 |
| MmeI | TCCRAC | 7 cut(s) | 117, 561, 1924, 1976, 2063, 2163, 2530 |
| MnlI | CCTC | 7 cut(s) | 217, 254, 1425, 1477, 1487, 1677, 1945 |
| Mph1103I | ATGCAT | 1 cut(s) | 879 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1061, 1636 |
| MspI | CCGG | 1 cut(s) | 1742 |
| MspR9I | CCNGG | 4 cut(s) | 186, 1557, 1724, 1742 |
| Mva1269I | GAATGC | 2 cut(s) | 209, 1894 |
| MvaI | CCWGG | 3 cut(s) | 186, 1557, 1724 |
| MvnI | CGCG | 3 cut(s) | 1839, 1854, 1856 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 1099, 1678, 1751, 1795, 1851, 1886, 1891 |
| NciI | CCSGG | 1 cut(s) | 1742 |
| NcoI | CCATGG | 2 cut(s) | 28, 1634 |
| NdeII | GATC | 4 cut(s) | 921, 1382, 1411, 2309 |
| NheI | GCTAGC | 1 cut(s) | 1102 |
| NlaIV | GGNNCC | 4 cut(s) | 1413, 1884, 1885, 2598 |
| NmeAIII | GCCGAG | 2 cut(s) | 1707, 1754 |
| NsiI | ATGCAT | 1 cut(s) | 879 |
| NspI | RCATGY | 3 cut(s) | 902, 909, 1740 |
| OliI | CACNNNNGTG | 2 cut(s) | 1061, 1636 |
| PacI | TTAATTAA | 2 cut(s) | 738, 813 |
| PagI | TCATGA | 1 cut(s) | 2609 |
| PauI | GCGCGC | 1 cut(s) | 1852 |
| PciI | ACATGT | 1 cut(s) | 905 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1810 |
| PctI | GAATGC | 2 cut(s) | 209, 1894 |
| PfeI | GAWTC | 4 cut(s) | 540, 1347, 1591, 2277 |
| PkrI | GCNGC | 3 cut(s) | 111, 172, 590 |
| PleI | GAGTC | 3 cut(s) | 936, 1565, 2233 |
| PmaCI | CACGTG | 2 cut(s) | 1925, 1998 |
| PmlI | CACGTG | 2 cut(s) | 1925, 1998 |
| PpsI | GAGTC | 3 cut(s) | 936, 1565, 2233 |
| Ppu21I | YACGTR | 3 cut(s) | 1814, 1925, 1998 |
| PscI | ACATGT | 1 cut(s) | 905 |
| PshBI | ATTAAT | 2 cut(s) | 738, 2327 |
| PsiI | TTATAA | 5 cut(s) | 692, 1611, 2363, 2406, 2450 |
| Psp124BI | GAGCTC | 1 cut(s) | 1768 |
| Psp1406I | AACGTT | 2 cut(s) | 521, 915 |
| Psp6I | CCWGG | 3 cut(s) | 184, 1555, 1722 |
| PspCI | CACGTG | 2 cut(s) | 1925, 1998 |
| PspGI | CCWGG | 3 cut(s) | 184, 1555, 1722 |
| PspN4I | GGNNCC | 4 cut(s) | 1413, 1884, 1885, 2598 |
| PspOMI | GGGCCC | 1 cut(s) | 1883 |
| PspPI | GGNCC | 7 cut(s) | 1670, 1693, 1726, 1883, 1884, 1969, 2596 |
| PstI | CTGCAG | 1 cut(s) | 114 |
| PsuI | RGATCY | 1 cut(s) | 1411 |
| PteI | GCGCGC | 1 cut(s) | 1852 |
| RsaI | GTAC | 6 cut(s) | 367, 1011, 1280, 1993, 2200, 2342 |
| RsaNI | GTAC | 6 cut(s) | 366, 1010, 1279, 1992, 2199, 2341 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1061, 1636 |
| SacI | GAGCTC | 1 cut(s) | 1768 |
| SatI | GCNGC | 3 cut(s) | 110, 171, 589 |
| Sau3AI | GATC | 4 cut(s) | 921, 1382, 1411, 2309 |
| Sau96I | GGNCC | 7 cut(s) | 1670, 1693, 1726, 1883, 1884, 1969, 2596 |
| SchI | GAGTC | 3 cut(s) | 936, 1565, 2234 |
| ScrFI | CCNGG | 4 cut(s) | 186, 1557, 1724, 1742 |
| SduI | GDGCHC | 4 cut(s) | 199, 994, 1768, 1887 |
| SfaNI | GCATC | 3 cut(s) | 309, 2146, 2163 |
| SfcI | CTRYAG | 2 cut(s) | 110, 547 |
| SfiI | GGCCNNNNNGGCC | 1 cut(s) | 1678 |
| SinI | GGWCC | 3 cut(s) | 1693, 1969, 2596 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1061, 1636 |
| SmlI | CTYRAG | 2 cut(s) | 198, 676 |
| SmoI | CTYRAG | 2 cut(s) | 198, 676 |
| SsiI | CCGC | 5 cut(s) | 531, 1533, 1880, 1887, 2466 |
| SspI | AATATT | 2 cut(s) | 820, 2556 |
| SspMI | CTAG | 3 cut(s) | 1103, 1575, 1584 |
| SstI | GAGCTC | 1 cut(s) | 1768 |
| StyD4I | CCNGG | 4 cut(s) | 184, 1555, 1722, 1740 |
| StyI | CCWWGG | 4 cut(s) | 28, 1634, 1711, 2272 |
| TaaI | ACNGT | 5 cut(s) | 548, 556, 1912, 1969, 1988 |
| TaiI | ACGT | 9 cut(s) | 524, 918, 1257, 1371, 1807, 1816, 1927, 1977, 2000 |
| TaqI | TCGA | 2 cut(s) | 303, 2280 |
| TatI | WGTACW | 3 cut(s) | 1278, 2198, 2340 |
| TfiI | GAWTC | 4 cut(s) | 540, 1347, 1591, 2277 |
| TscAI | CASTG | 2 cut(s) | 1516, 1655 |
| TseI | GCWGC | 3 cut(s) | 109, 170, 588 |
| TspGWI | ACGGA | 2 cut(s) | 1930, 2322 |
| TspRI | CASTG | 2 cut(s) | 1516, 1655 |
| VpaK11BI | GGWCC | 3 cut(s) | 1693, 1969, 2596 |
| VspI | ATTAAT | 2 cut(s) | 738, 2327 |
| XapI | RAATTY | 8 cut(s) | 310, 318, 805, 1352, 1579, 2020, 2352, 2575 |
| XbaI | TCTAGA | 2 cut(s) | 1574, 1583 |
| XceI | RCATGY | 3 cut(s) | 902, 909, 1740 |
| XmiI | GTMKAC | 3 cut(s) | 387, 2476, 2500 |
| XspI | CTAG | 3 cut(s) | 1103, 1575, 1584 |
| ZraI | GACGTC | 2 cut(s) | 1255, 1805 |
| Zsp2I | ATGCAT | 1 cut(s) | 879 |