pycom03g20540

ankyrin repeat-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
N/A
Physical Location & Seq
Reverse (-)
21054690 .. 21055780
1091 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 600 bp
ATGGGGGTTGGGGCCGCCACAATGCCGTGTGGTCTCCACTATGACTATGCTAGGCAGATCGGGGCTCCCGGATTGATGAAGCGATGGAGTGGGTATGGCTACCGTGGGTCATTGGCATGGACAGAGCCACCACGCAGTTTTTTTTATTACTGCTTTACTGAGGAGACGGTGGAGAAAACCCTTGAAATGAGGAATATGGAAACACCCTTTTTGATTGCCGCAAAAAATGGTGCGACTGAAATGGTGGAGAAGATCCTTGAAACTTTTCCGATGGCCATCCATGCAGGGGGAAAGAACGTGGTATTGTTAGCTGCAGAGAACAGGTTTCTATTTGCGATCCTTGATACTTCTGAGTACTGCTTGAAGGTGGGTAGCGTTATCACCACGGTCGCCTTTGCCACTGGTACTGCATTTCCAGGGGCATCAGAGAGGCTACTGGCACTCCAATCCTTGAAAACCAGGCAGCTTTTGAGGTGTTTGCCATCTCATCTCTCCTTGCGCTGTGCTCCTCCGTCACGTCCATGGCCATATTCCTGTCCATCCTGCTGTCCCGGCTCCCCGAATGGGCTTTTGGAAAGGAGCTGCCTATCAAGTATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000149 GO:0000166 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005886 GO:0006417 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006888 GO:0006900 GO:0006901 GO:0006903 GO:0006915 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0006996 GO:0007154 GO:0007165 GO:0007166 GO:0008144 GO:0008150 GO:0008152 GO:0008219 GO:0008625 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010468 GO:0010469 GO:0010506 GO:0010508 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010646 GO:0010648 GO:0010941 GO:0010942 GO:0010950 GO:0010952 GO:0012501 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017075 GO:0017076 GO:0017148 GO:0019222 GO:0019538 GO:0019905 GO:0022607 GO:0022898 GO:0023051 GO:0023052 GO:0023057 GO:0030162 GO:0030554 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032270 GO:0032409 GO:0032412 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0033194 GO:0033554 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034599 GO:0034762 GO:0034765 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0042221 GO:0042802 GO:0042981 GO:0043065 GO:0043066 GO:0043067 GO:0043068 GO:0043069 GO:0043085 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043269 GO:0043280 GO:0043281 GO:0043412 GO:0043933 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045862 GO:0046777 GO:0046907 GO:0048193 GO:0048194 GO:0048199 GO:0048207 GO:0048208 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051248 GO:0051336 GO:0051345 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0060548 GO:0061024 GO:0065003 GO:0065007 GO:0065009 GO:0070887 GO:0071310 GO:0071345 GO:0071346 GO:0071447 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090114 GO:0097159 GO:0097190 GO:0097191 GO:0097367 GO:0099601 GO:0140096 GO:1900449 GO:1901265 GO:1901363 GO:1901564 GO:1901700 GO:1901701 GO:1902041 GO:1902042 GO:1904062 GO:2000112 GO:2000113 GO:2000116 GO:2000310 GO:2001056 GO:2001233 GO:2001234 GO:2001236 GO:2001237 GO:2001257
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

200

Amino Acids

21.82

Weight (kDa)

8.58

Isoelectric Point (pI)

60.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 15, 219
AclWI GGATC 2 cut(s) 247, 331
AcoI YGGCCR 2 cut(s) 273, 524
AfaI GTAC 2 cut(s) 356, 406
AfiI CCNNNNNNNGG 2 cut(s) 286, 564
AgsI TTSAA 4 cut(s) 185, 260, 364, 454
AjiI CACGTC 1 cut(s) 518
AjnI CCWGG 2 cut(s) 415, 458
AjuI GAANNNNNNNTTGG 2 cut(s) 554, 586
AluBI AGCT 3 cut(s) 311, 466, 582
AluI AGCT 3 cut(s) 311, 466, 582
Alw21I GWGCWC 1 cut(s) 508
Alw26I GTCTC 2 cut(s) 38, 158
AlwI GGATC 2 cut(s) 247, 331
AoxI GGCC 3 cut(s) 12, 273, 524
ApeKI GCWGC 3 cut(s) 311, 463, 582
Asp700I GAANNNNTTC 1 cut(s) 264
AspLEI GCGC 1 cut(s) 501
AspS9I GGNCC 1 cut(s) 12
AsuC2I CCSGG 2 cut(s) 69, 552
AsuHPI GGTGA 1 cut(s) 373
BalI TGGCCA 2 cut(s) 275, 526
BanII GRGCYC 1 cut(s) 67
Bbv12I GWGCWC 1 cut(s) 508
BbvI GCAGC 3 cut(s) 298, 475, 569
BccI CCATC 5 cut(s) 78, 265, 284, 490, 547
BceAI ACGGC 1 cut(s) 10
BciT130I CCWGG 2 cut(s) 417, 460
BcnI CCSGG 2 cut(s) 69, 552
BcoDI GTCTC 2 cut(s) 38, 158
BfaI CTAG 1 cut(s) 51
BfmI CTRYAG 1 cut(s) 312
BisI GCNGC 5 cut(s) 15, 219, 312, 464, 583
BlsI GCNGC 5 cut(s) 16, 220, 313, 465, 584
BmcAI AGTACT 1 cut(s) 356
Bme1390I CCNGG 4 cut(s) 69, 417, 460, 552
BmgBI CACGTC 1 cut(s) 518
BmgT120I GGNCC 1 cut(s) 12
BmiI GGNNCC 3 cut(s) 13, 66, 556
BmrFI CCNGG 4 cut(s) 69, 417, 460, 552
BmsI GCATC 1 cut(s) 431
BpuMI CCSGG 2 cut(s) 69, 552
BsaBI GATNNNNATC 1 cut(s) 275
BsaI GGTCTC 1 cut(s) 38
BsaJI CCNNGG 4 cut(s) 103, 384, 416, 521
BsaXI ACNNNNNCTCC 2 cut(s) 426, 456
Bsc4I CCNNNNNNNGG 2 cut(s) 286, 564
Bse1I ACTGG 2 cut(s) 406, 441
Bse8I GATNNNNATC 1 cut(s) 275
BseBI CCWGG 2 cut(s) 417, 460
BseDI CCNNGG 4 cut(s) 103, 384, 416, 521
BseGI GGATG 2 cut(s) 276, 539
BseJI GATNNNNATC 1 cut(s) 275
BseLI CCNNNNNNNGG 2 cut(s) 286, 564
BseMII CTCAG 2 cut(s) 150, 342
BseNI ACTGG 2 cut(s) 406, 441
BseRI GAGGAG 2 cut(s) 176, 498
BseXI GCAGC 3 cut(s) 298, 475, 569
Bsh1285I CGRYCG 1 cut(s) 390
BshFI GGCC 3 cut(s) 14, 275, 526
BsiEI CGRYCG 1 cut(s) 390
BsiHKAI GWGCWC 1 cut(s) 508
BsiSI CCGG 2 cut(s) 69, 552
BslFI GGGAC 1 cut(s) 534
BslI CCNNNNNNNGG 2 cut(s) 286, 564
BsmAI GTCTC 2 cut(s) 38, 158
BsmBI CGTCTC 1 cut(s) 158
BsmFI GGGAC 1 cut(s) 534
BsnI GGCC 3 cut(s) 14, 275, 526
Bso31I GGTCTC 1 cut(s) 38
Bsp1286I GDGCHC 2 cut(s) 67, 508
Bsp143I GATC 3 cut(s) 57, 252, 336
Bsp19I CCATGG 1 cut(s) 521
BspACI CCGC 2 cut(s) 15, 219
BspANI GGCC 3 cut(s) 14, 275, 526
BspCNI CTCAG 2 cut(s) 151, 343
BspLI GGNNCC 3 cut(s) 13, 66, 556
BspMAI CTGCAG 1 cut(s) 316
BspPI GGATC 2 cut(s) 247, 331
BspTNI GGTCTC 1 cut(s) 38
BsrI ACTGG 2 cut(s) 406, 441
BssECI CCNNGG 4 cut(s) 103, 384, 416, 521
BssMI GATC 3 cut(s) 57, 252, 336
BssT1I CCWWGG 1 cut(s) 521
Bst2UI CCWGG 2 cut(s) 417, 460
Bst4CI ACNGT 3 cut(s) 104, 169, 388
BstDEI CTNAG 2 cut(s) 159, 351
BstDSI CCRYGG 3 cut(s) 103, 384, 521
BstF5I GGATG 2 cut(s) 276, 539
BstHHI GCGC 1 cut(s) 501
BstKTI GATC 3 cut(s) 60, 255, 339
BstMAI GTCTC 2 cut(s) 38, 158
BstMBI GATC 3 cut(s) 57, 252, 336
BstMCI CGRYCG 1 cut(s) 390
BstMWI GCNNNNNNNGC 2 cut(s) 281, 552
BstNI CCWGG 2 cut(s) 417, 460
BstSCI CCNGG 4 cut(s) 67, 415, 458, 550
BstSFI CTRYAG 1 cut(s) 312
BstV1I GCAGC 3 cut(s) 298, 475, 569
BstX2I RGATCY 1 cut(s) 252
BstYI RGATCY 1 cut(s) 252
BsuRI GGCC 3 cut(s) 14, 275, 526
BtgI CCRYGG 3 cut(s) 103, 384, 521
BtgZI GCGATG 1 cut(s) 97
BtrI CACGTC 1 cut(s) 518
BtsCI GGATG 2 cut(s) 276, 539
BtsIMutI CAGTG 1 cut(s) 399
CfoI GCGC 1 cut(s) 501
Cfr13I GGNCC 1 cut(s) 12
Csp6I GTAC 2 cut(s) 355, 405
CviAII CATG 3 cut(s) 117, 281, 522
CviQI GTAC 2 cut(s) 355, 405
DdeI CTNAG 2 cut(s) 159, 351
DpnI GATC 3 cut(s) 59, 254, 338
DpnII GATC 3 cut(s) 57, 252, 336
EaeI YGGCCR 2 cut(s) 273, 524
Eco130I CCWWGG 1 cut(s) 521
Eco24I GRGCYC 1 cut(s) 67
Eco31I GGTCTC 1 cut(s) 38
EcoRII CCWGG 2 cut(s) 415, 458
EcoT14I CCWWGG 1 cut(s) 521
EcoT38I GRGCYC 1 cut(s) 67
ErhI CCWWGG 1 cut(s) 521
Esp3I CGTCTC 1 cut(s) 158
FaeI CATG 3 cut(s) 120, 284, 525
FaiI YATR 8 cut(s) 42, 48, 96, 118, 197, 282, 523, 529
FaqI GGGAC 1 cut(s) 534
FatI CATG 3 cut(s) 116, 280, 521
Fnu4HI GCNGC 5 cut(s) 15, 219, 312, 464, 583
FokI GGATG 2 cut(s) 263, 526
FriOI GRGCYC 1 cut(s) 67
Fsp4HI GCNGC 5 cut(s) 15, 219, 312, 464, 583
FspBI CTAG 1 cut(s) 51
GlaI GCGC 1 cut(s) 500
GluI GCNGC 5 cut(s) 15, 219, 312, 464, 583
HaeIII GGCC 3 cut(s) 14, 275, 526
HapII CCGG 2 cut(s) 69, 552
HhaI GCGC 1 cut(s) 501
Hin1II CATG 3 cut(s) 120, 284, 525
Hin6I GCGC 1 cut(s) 499
HinP1I GCGC 1 cut(s) 499
HpaII CCGG 2 cut(s) 69, 552
HphI GGTGA 1 cut(s) 373
Hpy188I TCNGA 3 cut(s) 270, 352, 427
HpyAV CCTTC 1 cut(s) 358
HpyCH4III ACNGT 3 cut(s) 104, 169, 388
HpyCH4IV ACGT 2 cut(s) 297, 517
HpyCH4V TGCA 3 cut(s) 284, 314, 410
HpyF10VI GCNNNNNNNGC 2 cut(s) 281, 552
HpyF3I CTNAG 2 cut(s) 159, 351
HpySE526I ACGT 2 cut(s) 297, 517
Hsp92II CATG 3 cut(s) 120, 284, 525
HspAI GCGC 1 cut(s) 499
Kzo9I GATC 3 cut(s) 57, 252, 336
LmnI GCTCC 4 cut(s) 70, 511, 560, 579
Lsp1109I GCAGC 3 cut(s) 298, 475, 569
LweI GCATC 1 cut(s) 431
MaeI CTAG 1 cut(s) 51
MaeII ACGT 2 cut(s) 297, 517
MaeIII GTNAC 1 cut(s) 513
MalI GATC 3 cut(s) 59, 254, 338
MboI GATC 3 cut(s) 57, 252, 336
MboII GAAGA 1 cut(s) 262
MflI RGATCY 1 cut(s) 252
MhlI GDGCHC 2 cut(s) 67, 508
MlsI TGGCCA 2 cut(s) 275, 526
MluNI TGGCCA 2 cut(s) 275, 526
MnlI CCTC 5 cut(s) 154, 183, 423, 465, 519
Mox20I TGGCCA 2 cut(s) 275, 526
MroXI GAANNNNTTC 1 cut(s) 264
MscI TGGCCA 2 cut(s) 275, 526
MslI CAYNNNNRTG 2 cut(s) 115, 520
Msp20I TGGCCA 2 cut(s) 275, 526
MspI CCGG 2 cut(s) 69, 552
MspR9I CCNGG 4 cut(s) 69, 417, 460, 552
MvaI CCWGG 2 cut(s) 417, 460
MwoI GCNNNNNNNGC 2 cut(s) 281, 552
NciI CCSGG 2 cut(s) 69, 552
NcoI CCATGG 1 cut(s) 521
NdeII GATC 3 cut(s) 57, 252, 336
NlaIII CATG 3 cut(s) 120, 284, 525
NlaIV GGNNCC 3 cut(s) 13, 66, 556
NmuCI GTSAC 1 cut(s) 513
PdmI GAANNNNTTC 1 cut(s) 264
PfoI TCCNGGA 1 cut(s) 67
PkrI GCNGC 5 cut(s) 16, 220, 313, 465, 584
Psp6I CCWGG 2 cut(s) 415, 458
PspGI CCWGG 2 cut(s) 415, 458
PspN4I GGNNCC 3 cut(s) 13, 66, 556
PspPI GGNCC 1 cut(s) 12
PstI CTGCAG 1 cut(s) 316
PsuI RGATCY 1 cut(s) 252
RsaI GTAC 2 cut(s) 356, 406
RsaNI GTAC 2 cut(s) 355, 405
RseI CAYNNNNRTG 2 cut(s) 115, 520
SatI GCNGC 5 cut(s) 15, 219, 312, 464, 583
Sau3AI GATC 3 cut(s) 57, 252, 336
Sau96I GGNCC 1 cut(s) 12
ScaI AGTACT 1 cut(s) 356
ScrFI CCNGG 4 cut(s) 69, 417, 460, 552
SduI GDGCHC 2 cut(s) 67, 508
SetI ASST 8 cut(s) 300, 313, 326, 369, 468, 476, 520, 584
SfaNI GCATC 1 cut(s) 431
SfcI CTRYAG 1 cut(s) 312
SmiMI CAYNNNNRTG 2 cut(s) 115, 520
SsiI CCGC 2 cut(s) 15, 219
SspMI CTAG 1 cut(s) 51
StyD4I CCNGG 4 cut(s) 67, 415, 458, 550
StyI CCWWGG 1 cut(s) 521
TaaI ACNGT 3 cut(s) 104, 169, 388
TaiI ACGT 2 cut(s) 300, 520
TatI WGTACW 1 cut(s) 354
TauI GCSGC 2 cut(s) 17, 221
TscAI CASTG 1 cut(s) 406
TseFI GTSAC 1 cut(s) 513
TseI GCWGC 3 cut(s) 311, 463, 582
Tsp45I GTSAC 1 cut(s) 513
TspDTI ATGAA 1 cut(s) 92
TspGWI ACGGA 1 cut(s) 501
TspRI CASTG 1 cut(s) 406
XmnI GAANNNNTTC 1 cut(s) 264
XspI CTAG 1 cut(s) 51
ZrmI AGTACT 1 cut(s) 356
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.