pycom03g20580

ankyrin repeat-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
N/A
Physical Location & Seq
Reverse (-)
21080726 .. 21081096
371 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 330 bp
ATGGAATCGCCAATACTGATTGCTGCAAAAAATGGGGTGACTGAAATGGTGGAGAAGATCCTTGAACTTTTTCCGGTGGCAATACACGATATGAACACAGAGAAAAAGAATGTAGTGTTGTTAGCAGTGGAATACAGGCAACCCCTTGTGTACAACCTCTTTGGATCGATCTTTGAGGAGGTTGGTAATGTAGGGAATAGTGCATTACATCTAGCAGCAAAGTTGGGAGAACATAAGCCTTGGCTAATTCCTGGAGCTGCGCTGCAAATGCAATGGGAAATCAGATGGTATGAGGTAAGGATTCAAAGAACTGAAATATTCAACCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000149 GO:0000166 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005886 GO:0006417 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006888 GO:0006900 GO:0006901 GO:0006903 GO:0006915 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0006996 GO:0007154 GO:0007165 GO:0007166 GO:0008144 GO:0008150 GO:0008152 GO:0008219 GO:0008625 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010468 GO:0010469 GO:0010506 GO:0010508 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010646 GO:0010648 GO:0010941 GO:0010942 GO:0010950 GO:0010952 GO:0012501 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017075 GO:0017076 GO:0017148 GO:0019222 GO:0019538 GO:0019905 GO:0022607 GO:0022898 GO:0023051 GO:0023052 GO:0023057 GO:0030162 GO:0030554 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032270 GO:0032409 GO:0032412 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0033194 GO:0033554 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034599 GO:0034762 GO:0034765 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0042221 GO:0042802 GO:0042981 GO:0043065 GO:0043066 GO:0043067 GO:0043068 GO:0043069 GO:0043085 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043269 GO:0043280 GO:0043281 GO:0043412 GO:0043933 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045862 GO:0046777 GO:0046907 GO:0048193 GO:0048194 GO:0048199 GO:0048207 GO:0048208 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051248 GO:0051336 GO:0051345 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0060548 GO:0061024 GO:0065003 GO:0065007 GO:0065009 GO:0070887 GO:0071310 GO:0071345 GO:0071346 GO:0071447 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090114 GO:0097159 GO:0097190 GO:0097191 GO:0097367 GO:0099601 GO:0140096 GO:1900449 GO:1901265 GO:1901363 GO:1901564 GO:1901700 GO:1901701 GO:1902041 GO:1902042 GO:1904062 GO:2000112 GO:2000113 GO:2000116 GO:2000310 GO:2001056 GO:2001233 GO:2001234 GO:2001236 GO:2001237 GO:2001257
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

110

Amino Acids

12.52

Weight (kDa)

5.9

Isoelectric Point (pI)

36.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 52, 172
AfaI GTAC 1 cut(s) 152
AgsI TTSAA 3 cut(s) 65, 305, 322
AjnI CCWGG 1 cut(s) 250
AluBI AGCT 1 cut(s) 257
AluI AGCT 1 cut(s) 257
AlwI GGATC 2 cut(s) 52, 172
ApeKI GCWGC 4 cut(s) 23, 215, 257, 262
Asp700I GAANNNNTTC 1 cut(s) 69
AspLEI GCGC 1 cut(s) 262
AsuHPI GGTGA 1 cut(s) 49
BbvI GCAGC 4 cut(s) 10, 227, 244, 249
BccI CCATC 1 cut(s) 279
BciT130I CCWGG 1 cut(s) 252
BfaI CTAG 1 cut(s) 212
BisI GCNGC 4 cut(s) 24, 216, 258, 263
BlsI GCNGC 4 cut(s) 25, 217, 259, 264
Bme1390I CCNGG 1 cut(s) 252
BmrFI CCNGG 1 cut(s) 252
BpmI CTGGAG 1 cut(s) 273
Bsa29I ATCGAT 1 cut(s) 167
BsaJI CCNNGG 1 cut(s) 239
BsaWI WCCGGW 1 cut(s) 73
Bse3DI GCAATG 1 cut(s) 278
BseBI CCWGG 1 cut(s) 252
BseCI ATCGAT 1 cut(s) 167
BseDI CCNNGG 1 cut(s) 239
BseMI GCAATG 1 cut(s) 278
BseRI GAGGAG 1 cut(s) 191
BseXI GCAGC 4 cut(s) 10, 227, 244, 249
BshVI ATCGAT 1 cut(s) 167
BsiSI CCGG 1 cut(s) 74
Bsp1407I TGTACA 1 cut(s) 150
Bsp143I GATC 3 cut(s) 57, 164, 168
BspDI ATCGAT 1 cut(s) 167
BspPI GGATC 2 cut(s) 52, 172
BsrDI GCAATG 1 cut(s) 278
BsrGI TGTACA 1 cut(s) 150
BssECI CCNNGG 1 cut(s) 239
BssMI GATC 3 cut(s) 57, 164, 168
BssT1I CCWWGG 1 cut(s) 239
Bst2UI CCWGG 1 cut(s) 252
BstAUI TGTACA 1 cut(s) 150
BstHHI GCGC 1 cut(s) 262
BstKTI GATC 3 cut(s) 60, 167, 171
BstMBI GATC 3 cut(s) 57, 164, 168
BstMWI GCNNNNNNNGC 1 cut(s) 268
BstNI CCWGG 1 cut(s) 252
BstSCI CCNGG 1 cut(s) 250
BstV1I GCAGC 4 cut(s) 10, 227, 244, 249
BstX2I RGATCY 1 cut(s) 57
BstYI RGATCY 1 cut(s) 57
Bsu15I ATCGAT 1 cut(s) 167
BsuTUI ATCGAT 1 cut(s) 167
BtsI GCAGTG 1 cut(s) 132
BtsIMutI CAGTG 1 cut(s) 132
CfoI GCGC 1 cut(s) 262
ClaI ATCGAT 1 cut(s) 167
Csp6I GTAC 1 cut(s) 151
CviJI RGCY 3 cut(s) 238, 244, 257
CviKI_1 RGCY 3 cut(s) 238, 244, 257
CviQI GTAC 1 cut(s) 151
DpnI GATC 3 cut(s) 59, 166, 170
DpnII GATC 3 cut(s) 57, 164, 168
Eco130I CCWWGG 1 cut(s) 239
EcoRII CCWGG 1 cut(s) 250
EcoT14I CCWWGG 1 cut(s) 239
ErhI CCWWGG 1 cut(s) 239
FaiI YATR 3 cut(s) 92, 234, 291
Fnu4HI GCNGC 4 cut(s) 24, 216, 258, 263
Fsp4HI GCNGC 4 cut(s) 24, 216, 258, 263
FspBI CTAG 1 cut(s) 212
GlaI GCGC 1 cut(s) 261
GluI GCNGC 4 cut(s) 24, 216, 258, 263
GsuI CTGGAG 1 cut(s) 273
HapII CCGG 1 cut(s) 74
HhaI GCGC 1 cut(s) 262
Hin6I GCGC 1 cut(s) 260
HinP1I GCGC 1 cut(s) 260
HinfI GANTC 2 cut(s) 5, 301
HpaII CCGG 1 cut(s) 74
HphI GGTGA 1 cut(s) 49
Hpy166II GTNNAC 1 cut(s) 151
Hpy188I TCNGA 1 cut(s) 284
Hpy8I GTNNAC 1 cut(s) 151
HpyCH4V TGCA 4 cut(s) 26, 203, 265, 271
HpyF10VI GCNNNNNNNGC 1 cut(s) 268
HspAI GCGC 1 cut(s) 260
Kzo9I GATC 3 cut(s) 57, 164, 168
LmnI GCTCC 1 cut(s) 254
LpnPI CCDG 4 cut(s) 87, 121, 237, 264
Lsp1109I GCAGC 4 cut(s) 10, 227, 244, 249
MaeI CTAG 1 cut(s) 212
MaeIII GTNAC 1 cut(s) 37
MalI GATC 3 cut(s) 59, 166, 170
MboI GATC 3 cut(s) 57, 164, 168
MboII GAAGA 1 cut(s) 67
MflI RGATCY 1 cut(s) 57
MluCI AATT 1 cut(s) 246
MnlI CCTC 4 cut(s) 167, 169, 172, 286
MroXI GAANNNNTTC 1 cut(s) 69
MspI CCGG 1 cut(s) 74
MspR9I CCNGG 1 cut(s) 252
MvaI CCWGG 1 cut(s) 252
MwoI GCNNNNNNNGC 1 cut(s) 268
NdeII GATC 3 cut(s) 57, 164, 168
NmuCI GTSAC 1 cut(s) 37
PdmI GAANNNNTTC 1 cut(s) 69
PfeI GAWTC 2 cut(s) 5, 301
PfoI TCCNGGA 1 cut(s) 250
PkrI GCNGC 4 cut(s) 25, 217, 259, 264
Psp6I CCWGG 1 cut(s) 250
PspGI CCWGG 1 cut(s) 250
PsuI RGATCY 1 cut(s) 57
RsaI GTAC 1 cut(s) 152
RsaNI GTAC 1 cut(s) 151
SatI GCNGC 4 cut(s) 24, 216, 258, 263
Sau3AI GATC 3 cut(s) 57, 164, 168
ScrFI CCNGG 1 cut(s) 252
SetI ASST 4 cut(s) 159, 183, 259, 297
SgeI CNNG 9 cut(s) 74, 86, 98, 148, 158, 224, 252, 263, 264
Sse9I AATT 1 cut(s) 246
SspI AATATT 1 cut(s) 318
SspMI CTAG 1 cut(s) 212
StyD4I CCNGG 1 cut(s) 250
StyI CCWWGG 1 cut(s) 239
TaqI TCGA 1 cut(s) 167
TasI AATT 1 cut(s) 246
TatI WGTACW 1 cut(s) 150
TfiI GAWTC 2 cut(s) 5, 301
TscAI CASTG 1 cut(s) 132
TseFI GTSAC 1 cut(s) 37
TseI GCWGC 4 cut(s) 23, 215, 257, 262
Tsp45I GTSAC 1 cut(s) 37
TspDTI ATGAA 1 cut(s) 107
TspRI CASTG 1 cut(s) 132
XmnI GAANNNNTTC 1 cut(s) 69
XspI CTAG 1 cut(s) 212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.