pycom03g20590

ankyrin repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
N/A
Physical Location & Seq
Reverse (-)
21082194 .. 21082777
584 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 489 bp
ATGCAAATTACCAAACTAGACATACAAAAAGACAGCAGATTATTGACTCTAACTCATGTAGGGCCAAAATCCAATGTTGATGAAGGTCAAGGACACCAAAAGTTTCCCGTAAACTACAACACCTGCTTTGAGTCTGTCAAGCTTTTATCAAAGGCAATGCTGATTGTACTTGGCTTAGGGTCTGCGCAGATAAGAAAGATAAGGGATAAGAAAGAAAAACACAAATGGTCTGTTCAGATCATGAACGAATTGTTAAAACGAGCTAGATCATATGAGTATGAAGACAGTGGTATGAATCCACAGGCCCACAAAGACAATGATGAGACCAAACCTTATGAACTTGTTGACGGCCGCGCCATCTTCATGCTCCCCGAGGGCGACAGTGAACAAGGAACTGTGACTAGTAGCACTTCCCCATTGCCTCAACAGGAGGCTGAGAAGCCAAATAATGGTAAAGAAAACATCCCAGAAGGTATAATTGCTATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000149 GO:0000166 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005886 GO:0006417 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006888 GO:0006900 GO:0006901 GO:0006903 GO:0006915 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0006996 GO:0007154 GO:0007165 GO:0007166 GO:0008144 GO:0008150 GO:0008152 GO:0008219 GO:0008625 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010468 GO:0010469 GO:0010506 GO:0010508 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010646 GO:0010648 GO:0010941 GO:0010942 GO:0010950 GO:0010952 GO:0012501 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017075 GO:0017076 GO:0017148 GO:0019222 GO:0019538 GO:0019905 GO:0022607 GO:0022898 GO:0023051 GO:0023052 GO:0023057 GO:0030162 GO:0030554 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032270 GO:0032409 GO:0032412 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0033194 GO:0033554 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034599 GO:0034762 GO:0034765 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0042221 GO:0042802 GO:0042981 GO:0043065 GO:0043066 GO:0043067 GO:0043068 GO:0043069 GO:0043085 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043269 GO:0043280 GO:0043281 GO:0043412 GO:0043933 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045862 GO:0046777 GO:0046907 GO:0048193 GO:0048194 GO:0048199 GO:0048207 GO:0048208 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051248 GO:0051336 GO:0051345 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0060548 GO:0061024 GO:0065003 GO:0065007 GO:0065009 GO:0070887 GO:0071310 GO:0071345 GO:0071346 GO:0071447 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090114 GO:0097159 GO:0097190 GO:0097191 GO:0097367 GO:0099601 GO:0140096 GO:1900449 GO:1901265 GO:1901363 GO:1901564 GO:1901700 GO:1901701 GO:1902041 GO:1902042 GO:1904062 GO:2000112 GO:2000113 GO:2000116 GO:2000310 GO:2001056 GO:2001233 GO:2001234 GO:2001236 GO:2001237 GO:2001257
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank_2 PGG

Protein Analysis

163

Amino Acids

18.22

Weight (kDa)

6.43

Isoelectric Point (pI)

32.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 131
Acc16I TGCGCA 1 cut(s) 186
Acc36I ACCTGC 1 cut(s) 131
AccB7I CCANNNNNTGG 1 cut(s) 449
AccII CGCG 1 cut(s) 354
AciI CCGC 1 cut(s) 352
AcoI YGGCCR 1 cut(s) 349
AfaI GTAC 1 cut(s) 168
AfiI CCNNNNNNNGG 1 cut(s) 449
AhlI ACTAGT 1 cut(s) 401
AluBI AGCT 2 cut(s) 142, 263
AluI AGCT 2 cut(s) 142, 263
Alw26I GTCTC 1 cut(s) 317
Ama87I CYCGRG 1 cut(s) 371
AoxI GGCC 3 cut(s) 62, 303, 349
AspLEI GCGC 2 cut(s) 187, 356
AspS9I GGNCC 2 cut(s) 62, 304
AvaI CYCGRG 1 cut(s) 371
BbsI GAAGAC 1 cut(s) 288
BccI CCATC 1 cut(s) 365
BceAI ACGGC 1 cut(s) 364
BcoDI GTCTC 1 cut(s) 317
BcuI ACTAGT 1 cut(s) 401
BfaI CTAG 3 cut(s) 17, 264, 402
BfuAI ACCTGC 1 cut(s) 131
BisI GCNGC 1 cut(s) 352
BlsI GCNGC 1 cut(s) 353
BmeT110I CYCGRG 1 cut(s) 371
BmgT120I GGNCC 2 cut(s) 62, 304
BpiI GAAGAC 1 cut(s) 288
Bpu10I CCTNAGC 1 cut(s) 175
BsaI GGTCTC 1 cut(s) 317
BsaJI CCNNGG 1 cut(s) 372
Bsc4I CCNNNNNNNGG 1 cut(s) 449
Bse3DI GCAATG 2 cut(s) 162, 416
BseDI CCNNGG 1 cut(s) 372
BseGI GGATG 1 cut(s) 462
BseLI CCNNNNNNNGG 1 cut(s) 449
BseMI GCAATG 2 cut(s) 162, 416
BseMII CTCAG 1 cut(s) 426
BseX3I CGGCCG 1 cut(s) 349
Bsh1236I CGCG 1 cut(s) 354
Bsh1285I CGRYCG 1 cut(s) 352
BshFI GGCC 3 cut(s) 64, 305, 351
BsiEI CGRYCG 1 cut(s) 352
BsiHKCI CYCGRG 1 cut(s) 371
BslI CCNNNNNNNGG 1 cut(s) 449
BsmAI GTCTC 1 cut(s) 317
BsnI GGCC 3 cut(s) 64, 305, 351
Bso31I GGTCTC 1 cut(s) 317
BsoBI CYCGRG 1 cut(s) 371
Bsp143I GATC 2 cut(s) 237, 266
BspACI CCGC 1 cut(s) 352
BspANI GGCC 3 cut(s) 64, 305, 351
BspCNI CTCAG 1 cut(s) 427
BspFNI CGCG 1 cut(s) 354
BspHI TCATGA 1 cut(s) 240
BspMI ACCTGC 1 cut(s) 131
BspTNI GGTCTC 1 cut(s) 317
BsrDI GCAATG 2 cut(s) 162, 416
BssECI CCNNGG 1 cut(s) 372
BssMI GATC 2 cut(s) 237, 266
Bst4CI ACNGT 3 cut(s) 287, 383, 397
BstDEI CTNAG 2 cut(s) 175, 435
BstF5I GGATG 1 cut(s) 462
BstFNI CGCG 1 cut(s) 354
BstHHI GCGC 2 cut(s) 187, 356
BstKTI GATC 2 cut(s) 240, 269
BstMAI GTCTC 1 cut(s) 317
BstMBI GATC 2 cut(s) 237, 266
BstMCI CGRYCG 1 cut(s) 352
BstUI CGCG 1 cut(s) 354
BstV2I GAAGAC 1 cut(s) 288
BstZI CGGCCG 1 cut(s) 349
BsuRI GGCC 3 cut(s) 64, 305, 351
BtsCI GGATG 1 cut(s) 462
BtsIMutI CAGTG 2 cut(s) 292, 388
BveI ACCTGC 1 cut(s) 131
CciI TCATGA 1 cut(s) 240
CfoI GCGC 2 cut(s) 187, 356
Cfr13I GGNCC 2 cut(s) 62, 304
Csp6I GTAC 1 cut(s) 167
CviAII CATG 3 cut(s) 56, 241, 364
CviJI RGCY 8 cut(s) 64, 142, 174, 263, 305, 351, 434, 442
CviKI_1 RGCY 8 cut(s) 64, 142, 174, 263, 305, 351, 434, 442
CviQI GTAC 1 cut(s) 167
DdeI CTNAG 2 cut(s) 175, 435
DpnI GATC 2 cut(s) 239, 268
DpnII GATC 2 cut(s) 237, 266
EaeI YGGCCR 1 cut(s) 349
EagI CGGCCG 1 cut(s) 349
EclXI CGGCCG 1 cut(s) 349
Eco31I GGTCTC 1 cut(s) 317
Eco52I CGGCCG 1 cut(s) 349
Eco88I CYCGRG 1 cut(s) 371
FaeI CATG 3 cut(s) 59, 244, 367
FatI CATG 3 cut(s) 55, 240, 363
FauNDI CATATG 1 cut(s) 271
Fnu4HI GCNGC 1 cut(s) 352
FokI GGATG 1 cut(s) 449
Fsp4HI GCNGC 1 cut(s) 352
FspBI CTAG 3 cut(s) 17, 264, 402
FspI TGCGCA 1 cut(s) 186
GlaI GCGC 2 cut(s) 186, 355
GluI GCNGC 1 cut(s) 352
HaeIII GGCC 3 cut(s) 64, 305, 351
HhaI GCGC 2 cut(s) 187, 356
Hin1II CATG 3 cut(s) 59, 244, 367
Hin6I GCGC 2 cut(s) 185, 354
HinP1I GCGC 2 cut(s) 185, 354
HincII GTYRAC 1 cut(s) 346
HindII GTYRAC 1 cut(s) 346
HindIII AAGCTT 1 cut(s) 140
HinfI GANTC 3 cut(s) 46, 131, 295
Hpy166II GTNNAC 3 cut(s) 112, 346, 386
Hpy188I TCNGA 1 cut(s) 237
Hpy188III TCNNGA 1 cut(s) 241
Hpy8I GTNNAC 3 cut(s) 112, 346, 386
HpyAV CCTTC 2 cut(s) 77, 464
HpyCH4III ACNGT 3 cut(s) 287, 383, 397
HpyCH4V TGCA 1 cut(s) 4
HpyF3I CTNAG 2 cut(s) 175, 435
Hsp92II CATG 3 cut(s) 59, 244, 367
HspAI GCGC 2 cut(s) 185, 354
Kzo9I GATC 2 cut(s) 237, 266
LmnI GCTCC 1 cut(s) 372
LpnPI CCDG 4 cut(s) 136, 287, 413, 480
MaeI CTAG 3 cut(s) 17, 264, 402
MaeIII GTNAC 1 cut(s) 397
MalI GATC 2 cut(s) 239, 268
MboI GATC 2 cut(s) 237, 266
MboII GAAGA 2 cut(s) 293, 352
MluCI AATT 3 cut(s) 6, 248, 477
MlyI GAGTC 2 cut(s) 40, 140
MnlI CCTC 3 cut(s) 367, 424, 432
MseI TTAA 2 cut(s) 254, 487
MslI CAYNNNNRTG 1 cut(s) 362
MvnI CGCG 1 cut(s) 354
NdeI CATATG 1 cut(s) 271
NdeII GATC 2 cut(s) 237, 266
NlaIII CATG 3 cut(s) 59, 244, 367
NmuCI GTSAC 1 cut(s) 397
NsbI TGCGCA 1 cut(s) 186
PagI TCATGA 1 cut(s) 240
PaqCI CACCTGC 1 cut(s) 131
PfeI GAWTC 1 cut(s) 295
PflMI CCANNNNNTGG 1 cut(s) 449
PkrI GCNGC 1 cut(s) 353
PleI GAGTC 2 cut(s) 40, 139
PpsI GAGTC 2 cut(s) 40, 139
PspPI GGNCC 2 cut(s) 62, 304
RsaI GTAC 1 cut(s) 168
RsaNI GTAC 1 cut(s) 167
RseI CAYNNNNRTG 1 cut(s) 362
SaqAI TTAA 2 cut(s) 254, 487
SatI GCNGC 1 cut(s) 352
Sau3AI GATC 2 cut(s) 237, 266
Sau96I GGNCC 2 cut(s) 62, 304
SchI GAGTC 2 cut(s) 40, 140
SetI ASST 6 cut(s) 88, 125, 144, 265, 334, 475
SmiMI CAYNNNNRTG 1 cut(s) 362
SpeI ACTAGT 1 cut(s) 401
Sse9I AATT 3 cut(s) 6, 248, 477
SsiI CCGC 1 cut(s) 352
SspMI CTAG 3 cut(s) 17, 264, 402
TaaI ACNGT 3 cut(s) 287, 383, 397
TasI AATT 3 cut(s) 6, 248, 477
TatI WGTACW 1 cut(s) 166
TauI GCSGC 1 cut(s) 354
TfiI GAWTC 1 cut(s) 295
Tru1I TTAA 2 cut(s) 254, 487
Tru9I TTAA 2 cut(s) 254, 487
TscAI CASTG 2 cut(s) 292, 388
TseFI GTSAC 1 cut(s) 397
Tsp45I GTSAC 1 cut(s) 397
TspDTI ATGAA 6 cut(s) 96, 257, 294, 308, 351, 352
TspRI CASTG 2 cut(s) 292, 388
Van91I CCANNNNNTGG 1 cut(s) 449
XspI CTAG 3 cut(s) 17, 264, 402
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.