pycom03g20640

ankyrin repeat-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
N/A
Physical Location & Seq
Reverse (-)
21114081 .. 21129335
15255 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 603 bp
ATGAACGAATTGTTAAAACGAGCTAGATCATATGAGTATGAAGACAGTGGTATGAATCCGCAGGCCCACAAAGACAATGATGAGACCAAACCTTATGAACTTGTTGACGGCCGCGCCATCTTCATGCTCCCCGAGGGCGACAGTGAACAAGGAACTGTGACTAGTAGCACTTCCCCATTGCCTCAACAGGAGGCTGAGAAGCCAAATAATGGTAAAGAAAACATCCCAGAAGGGTCATCAACAGATCAAAAGGCGGAGAATAAAACCCCAAGCGCAAGAGGGGAATCGCCAATACTGATTGCTGCAAAAAATGGGGTGACTGAAATGGTGGAGGAGATCCTTGAACTTTTTCCGGTGGCAATACACGATATGAACTTAGAGAAAAAGAACATAGTGTTGTTGGCAGTGGAACACAGGCAACCCCATGTGTACAAGCTCTTGCTCAAAAGAAAAATCCTGAAAGAAAGTGTGTTCAGTATGGTGGATCACGACGGGAATAGTGCATTACATCTAGCAGCAAAGTTGGGAGAGCATAAGCCTTGGCTAATTCCTGGAGCTGCGCTACAAATGCAATGGGAAATCAGATGGACAGAACCAAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000149 GO:0000166 GO:0002376 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004683 GO:0005488 GO:0005515 GO:0005516 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005856 GO:0005886 GO:0006417 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006888 GO:0006900 GO:0006901 GO:0006903 GO:0006915 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0006996 GO:0007154 GO:0007165 GO:0007166 GO:0008144 GO:0008150 GO:0008152 GO:0008219 GO:0008625 GO:0009889 GO:0009890 GO:0009892 GO:0009893 GO:0009894 GO:0009896 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010468 GO:0010469 GO:0010506 GO:0010508 GO:0010556 GO:0010558 GO:0010604 GO:0010605 GO:0010608 GO:0010629 GO:0010646 GO:0010648 GO:0010941 GO:0010942 GO:0010950 GO:0010952 GO:0012501 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017075 GO:0017076 GO:0017148 GO:0019222 GO:0019538 GO:0019905 GO:0022607 GO:0022898 GO:0023051 GO:0023052 GO:0023057 GO:0030162 GO:0030554 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031329 GO:0031331 GO:0032268 GO:0032269 GO:0032270 GO:0032409 GO:0032412 GO:0032553 GO:0032555 GO:0032559 GO:0032879 GO:0033194 GO:0033554 GO:0034097 GO:0034248 GO:0034249 GO:0034341 GO:0034599 GO:0034762 GO:0034765 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0042221 GO:0042802 GO:0042981 GO:0043065 GO:0043066 GO:0043067 GO:0043068 GO:0043069 GO:0043085 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043269 GO:0043280 GO:0043281 GO:0043412 GO:0043933 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0045862 GO:0046777 GO:0046907 GO:0048193 GO:0048194 GO:0048199 GO:0048207 GO:0048208 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051049 GO:0051171 GO:0051172 GO:0051173 GO:0051179 GO:0051234 GO:0051246 GO:0051247 GO:0051248 GO:0051336 GO:0051345 GO:0051640 GO:0051641 GO:0051648 GO:0051649 GO:0051650 GO:0051656 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0060548 GO:0061024 GO:0065003 GO:0065007 GO:0065009 GO:0070887 GO:0071310 GO:0071345 GO:0071346 GO:0071447 GO:0071704 GO:0071840 GO:0071944 GO:0080090 GO:0090114 GO:0097159 GO:0097190 GO:0097191 GO:0097367 GO:0099601 GO:0140096 GO:1900449 GO:1901265 GO:1901363 GO:1901564 GO:1901700 GO:1901701 GO:1902041 GO:1902042 GO:1904062 GO:2000112 GO:2000113 GO:2000116 GO:2000310 GO:2001056 GO:2001233 GO:2001234 GO:2001236 GO:2001237 GO:2001257
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

201

Amino Acids

22.49

Weight (kDa)

5.43

Isoelectric Point (pI)

48.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 100 - 177 4.2e-07 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 209
AccII CGCG 1 cut(s) 114
AciI CCGC 3 cut(s) 59, 112, 254
AclWI GGATC 2 cut(s) 331, 492
AcoI YGGCCR 1 cut(s) 109
AfaI GTAC 1 cut(s) 431
AfiI CCNNNNNNNGG 1 cut(s) 209
AgsI TTSAA 1 cut(s) 344
AhlI ACTAGT 1 cut(s) 161
AjnI CCWGG 1 cut(s) 550
AluBI AGCT 3 cut(s) 23, 436, 557
AluI AGCT 3 cut(s) 23, 436, 557
Alw26I GTCTC 1 cut(s) 77
AlwI GGATC 2 cut(s) 331, 492
Ama87I CYCGRG 1 cut(s) 131
AoxI GGCC 2 cut(s) 63, 109
ApeKI GCWGC 3 cut(s) 302, 515, 557
Asp700I GAANNNNTTC 1 cut(s) 348
AspLEI GCGC 3 cut(s) 116, 275, 562
AspS9I GGNCC 1 cut(s) 64
AsuHPI GGTGA 1 cut(s) 328
AvaI CYCGRG 1 cut(s) 131
BbsI GAAGAC 1 cut(s) 48
BbvI GCAGC 3 cut(s) 289, 527, 544
BccI CCATC 2 cut(s) 125, 579
BceAI ACGGC 1 cut(s) 124
BciT130I CCWGG 1 cut(s) 552
BcoDI GTCTC 1 cut(s) 77
BcuI ACTAGT 1 cut(s) 161
BfaI CTAG 3 cut(s) 24, 162, 512
BisI GCNGC 4 cut(s) 112, 303, 516, 558
BlsI GCNGC 4 cut(s) 113, 304, 517, 559
Bme1390I CCNGG 1 cut(s) 552
BmeT110I CYCGRG 1 cut(s) 131
BmgT120I GGNCC 1 cut(s) 64
BmrFI CCNGG 1 cut(s) 552
BpiI GAAGAC 1 cut(s) 48
BpmI CTGGAG 1 cut(s) 573
BsaI GGTCTC 1 cut(s) 77
BsaJI CCNNGG 2 cut(s) 132, 539
BsaWI WCCGGW 1 cut(s) 352
Bsc4I CCNNNNNNNGG 1 cut(s) 209
Bse3DI GCAATG 2 cut(s) 176, 578
BseBI CCWGG 1 cut(s) 552
BseDI CCNNGG 2 cut(s) 132, 539
BseGI GGATG 1 cut(s) 222
BseLI CCNNNNNNNGG 1 cut(s) 209
BseMI GCAATG 2 cut(s) 176, 578
BseMII CTCAG 1 cut(s) 186
BseRI GAGGAG 1 cut(s) 347
BseX3I CGGCCG 1 cut(s) 109
BseXI GCAGC 3 cut(s) 289, 527, 544
Bsh1236I CGCG 1 cut(s) 114
Bsh1285I CGRYCG 1 cut(s) 112
BshFI GGCC 2 cut(s) 65, 111
BsiEI CGRYCG 1 cut(s) 112
BsiHKCI CYCGRG 1 cut(s) 131
BsiSI CCGG 1 cut(s) 353
BslI CCNNNNNNNGG 1 cut(s) 209
BsmAI GTCTC 1 cut(s) 77
BsnI GGCC 2 cut(s) 65, 111
Bso31I GGTCTC 1 cut(s) 77
BsoBI CYCGRG 1 cut(s) 131
Bsp1407I TGTACA 1 cut(s) 429
Bsp143I GATC 4 cut(s) 26, 244, 336, 484
BspACI CCGC 3 cut(s) 59, 112, 254
BspANI GGCC 2 cut(s) 65, 111
BspCNI CTCAG 1 cut(s) 187
BspFNI CGCG 1 cut(s) 114
BspPI GGATC 2 cut(s) 331, 492
BspTNI GGTCTC 1 cut(s) 77
BsrDI GCAATG 2 cut(s) 176, 578
BsrGI TGTACA 1 cut(s) 429
BssECI CCNNGG 2 cut(s) 132, 539
BssMI GATC 4 cut(s) 26, 244, 336, 484
BssT1I CCWWGG 1 cut(s) 539
Bst2UI CCWGG 1 cut(s) 552
Bst4CI ACNGT 3 cut(s) 47, 143, 157
BstAUI TGTACA 1 cut(s) 429
BstC8I GCNNGC 1 cut(s) 63
BstDEI CTNAG 2 cut(s) 195, 376
BstF5I GGATG 1 cut(s) 222
BstFNI CGCG 1 cut(s) 114
BstHHI GCGC 3 cut(s) 116, 275, 562
BstKTI GATC 4 cut(s) 29, 247, 339, 487
BstMAI GTCTC 1 cut(s) 77
BstMBI GATC 4 cut(s) 26, 244, 336, 484
BstMCI CGRYCG 1 cut(s) 112
BstMWI GCNNNNNNNGC 1 cut(s) 568
BstNI CCWGG 1 cut(s) 552
BstSCI CCNGG 1 cut(s) 550
BstUI CGCG 1 cut(s) 114
BstV1I GCAGC 3 cut(s) 289, 527, 544
BstV2I GAAGAC 1 cut(s) 48
BstX2I RGATCY 1 cut(s) 336
BstYI RGATCY 1 cut(s) 336
BstZI CGGCCG 1 cut(s) 109
BsuRI GGCC 2 cut(s) 65, 111
BtsCI GGATG 1 cut(s) 222
BtsI GCAGTG 1 cut(s) 411
BtsIMutI CAGTG 3 cut(s) 52, 148, 411
Cac8I GCNNGC 1 cut(s) 63
CfoI GCGC 3 cut(s) 116, 275, 562
Cfr13I GGNCC 1 cut(s) 64
Csp6I GTAC 1 cut(s) 430
CviAII CATG 2 cut(s) 124, 425
CviJI RGCY 9 cut(s) 23, 65, 111, 194, 202, 436, 538, 544, 557
CviKI_1 RGCY 9 cut(s) 23, 65, 111, 194, 202, 436, 538, 544, 557
CviQI GTAC 1 cut(s) 430
DdeI CTNAG 2 cut(s) 195, 376
DpnI GATC 4 cut(s) 28, 246, 338, 486
DpnII GATC 4 cut(s) 26, 244, 336, 484
EaeI YGGCCR 1 cut(s) 109
EagI CGGCCG 1 cut(s) 109
EciI GGCGGA 1 cut(s) 269
EclXI CGGCCG 1 cut(s) 109
Eco130I CCWWGG 1 cut(s) 539
Eco31I GGTCTC 1 cut(s) 77
Eco52I CGGCCG 1 cut(s) 109
Eco88I CYCGRG 1 cut(s) 131
EcoRII CCWGG 1 cut(s) 550
EcoT14I CCWWGG 1 cut(s) 539
ErhI CCWWGG 1 cut(s) 539
FaeI CATG 2 cut(s) 127, 428
FatI CATG 2 cut(s) 123, 424
FauNDI CATATG 1 cut(s) 31
Fnu4HI GCNGC 4 cut(s) 112, 303, 516, 558
FokI GGATG 1 cut(s) 209
Fsp4HI GCNGC 4 cut(s) 112, 303, 516, 558
FspBI CTAG 3 cut(s) 24, 162, 512
GlaI GCGC 3 cut(s) 115, 274, 561
GluI GCNGC 4 cut(s) 112, 303, 516, 558
GsuI CTGGAG 1 cut(s) 573
HaeIII GGCC 2 cut(s) 65, 111
HapII CCGG 1 cut(s) 353
HhaI GCGC 3 cut(s) 116, 275, 562
Hin1II CATG 2 cut(s) 127, 428
Hin6I GCGC 3 cut(s) 114, 273, 560
HinP1I GCGC 3 cut(s) 114, 273, 560
HincII GTYRAC 1 cut(s) 106
HindII GTYRAC 1 cut(s) 106
HinfI GANTC 2 cut(s) 55, 284
HpaII CCGG 1 cut(s) 353
HphI GGTGA 1 cut(s) 328
Hpy166II GTNNAC 3 cut(s) 106, 146, 430
Hpy188I TCNGA 1 cut(s) 584
Hpy188III TCNNGA 2 cut(s) 457, 488
Hpy8I GTNNAC 3 cut(s) 106, 146, 430
Hpy99I CGWCG 1 cut(s) 494
HpyAV CCTTC 1 cut(s) 224
HpyCH4III ACNGT 3 cut(s) 47, 143, 157
HpyCH4V TGCA 3 cut(s) 305, 503, 571
HpyF10VI GCNNNNNNNGC 1 cut(s) 568
HpyF3I CTNAG 2 cut(s) 195, 376
Hsp92II CATG 2 cut(s) 127, 428
HspAI GCGC 3 cut(s) 114, 273, 560
Kzo9I GATC 4 cut(s) 26, 244, 336, 484
LmnI GCTCC 2 cut(s) 132, 554
LpnPI CCDG 8 cut(s) 47, 173, 240, 366, 400, 470, 537, 564
Lsp1109I GCAGC 3 cut(s) 289, 527, 544
MaeI CTAG 3 cut(s) 24, 162, 512
MaeIII GTNAC 2 cut(s) 157, 316
MalI GATC 4 cut(s) 28, 246, 338, 486
MboI GATC 4 cut(s) 26, 244, 336, 484
MboII GAAGA 2 cut(s) 53, 112
MflI RGATCY 1 cut(s) 336
MluCI AATT 2 cut(s) 8, 546
MnlI CCTC 5 cut(s) 127, 184, 192, 272, 325
MroXI GAANNNNTTC 1 cut(s) 348
MseI TTAA 1 cut(s) 14
MslI CAYNNNNRTG 1 cut(s) 122
MspI CCGG 1 cut(s) 353
MspR9I CCNGG 1 cut(s) 552
MvaI CCWGG 1 cut(s) 552
MvnI CGCG 1 cut(s) 114
MwoI GCNNNNNNNGC 1 cut(s) 568
NdeI CATATG 1 cut(s) 31
NdeII GATC 4 cut(s) 26, 244, 336, 484
NlaIII CATG 2 cut(s) 127, 428
NmuCI GTSAC 2 cut(s) 157, 316
PdmI GAANNNNTTC 1 cut(s) 348
PfeI GAWTC 2 cut(s) 55, 284
PflMI CCANNNNNTGG 1 cut(s) 209
PfoI TCCNGGA 1 cut(s) 550
PkrI GCNGC 4 cut(s) 113, 304, 517, 559
Psp6I CCWGG 1 cut(s) 550
PspGI CCWGG 1 cut(s) 550
PspPI GGNCC 1 cut(s) 64
PsuI RGATCY 1 cut(s) 336
RsaI GTAC 1 cut(s) 431
RsaNI GTAC 1 cut(s) 430
RseI CAYNNNNRTG 1 cut(s) 122
SaqAI TTAA 1 cut(s) 14
SatI GCNGC 4 cut(s) 112, 303, 516, 558
Sau3AI GATC 4 cut(s) 26, 244, 336, 484
Sau96I GGNCC 1 cut(s) 64
ScrFI CCNGG 1 cut(s) 552
SetI ASST 4 cut(s) 25, 94, 438, 559
SmiMI CAYNNNNRTG 1 cut(s) 122
SpeI ACTAGT 1 cut(s) 161
Sse9I AATT 2 cut(s) 8, 546
SsiI CCGC 3 cut(s) 59, 112, 254
SspMI CTAG 3 cut(s) 24, 162, 512
StyD4I CCNGG 1 cut(s) 550
StyI CCWWGG 1 cut(s) 539
TaaI ACNGT 3 cut(s) 47, 143, 157
TasI AATT 2 cut(s) 8, 546
TatI WGTACW 1 cut(s) 429
TauI GCSGC 1 cut(s) 114
TfiI GAWTC 2 cut(s) 55, 284
Tru1I TTAA 1 cut(s) 14
Tru9I TTAA 1 cut(s) 14
TscAI CASTG 3 cut(s) 52, 148, 411
TseFI GTSAC 2 cut(s) 157, 316
TseI GCWGC 3 cut(s) 302, 515, 557
Tsp45I GTSAC 2 cut(s) 157, 316
TspDTI ATGAA 6 cut(s) 17, 54, 68, 111, 112, 386
TspRI CASTG 3 cut(s) 52, 148, 411
Van91I CCANNNNNTGG 1 cut(s) 209
XmnI GAANNNNTTC 1 cut(s) 348
XspI CTAG 3 cut(s) 24, 162, 512
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.