pycom04g00050

Importin-beta N-terminal domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
N/A
Physical Location & Seq
Forward (+)
20595 .. 20863
269 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 204 bp
ATGCCTCCCATGTATTTTGTTCTTACATCAAGTGATTTAGAGGAGTGGTACCAAAGTCCTGAATCATTCCATCATGAGCAGGATATGGTTCAGTGGACAGAAAAATTAAGGCCATGTGCTGAAGCTTTATACATTGTTCTATTTGAAAATCACAGCCAGGTTGGTACATGTTTATACGTGGTTTTGTTAAATTATTGTTCCTAA

Protein Analysis

68

Amino Acids

7.95

Weight (kDa)

4.47

Isoelectric Point (pI)

56.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 48
AccB1I GGYRCC 1 cut(s) 48
AcuI CTGAAG 1 cut(s) 141
AfaI GTAC 2 cut(s) 50, 166
AflIII ACRYGT 1 cut(s) 167
AgsI TTSAA 1 cut(s) 146
AjnI CCWGG 1 cut(s) 156
AluBI AGCT 1 cut(s) 125
AluI AGCT 1 cut(s) 125
AoxI GGCC 1 cut(s) 110
Asp718I GGTACC 1 cut(s) 48
BaeI ACNNNNGTAYC 2 cut(s) 40, 73
BanI GGYRCC 1 cut(s) 48
BccI CCATC 1 cut(s) 78
BciT130I CCWGG 1 cut(s) 158
Bme1390I CCNGG 1 cut(s) 158
BmiI GGNNCC 1 cut(s) 50
BmrFI CCNGG 1 cut(s) 158
BsaAI YACGTR 1 cut(s) 178
BseBI CCWGG 1 cut(s) 158
BseRI GAGGAG 1 cut(s) 56
BshFI GGCC 1 cut(s) 112
BshNI GGYRCC 1 cut(s) 48
BsnI GGCC 1 cut(s) 112
BspANI GGCC 1 cut(s) 112
BspHI TCATGA 1 cut(s) 73
BspLI GGNNCC 1 cut(s) 50
BspT107I GGYRCC 1 cut(s) 48
Bst2UI CCWGG 1 cut(s) 158
BstBAI YACGTR 1 cut(s) 178
BstNI CCWGG 1 cut(s) 158
BstNSI RCATGY 1 cut(s) 171
BstSCI CCNGG 1 cut(s) 156
BsuRI GGCC 1 cut(s) 112
BtsIMutI CAGTG 1 cut(s) 98
CciI TCATGA 1 cut(s) 73
Csp6I GTAC 2 cut(s) 49, 165
CviAII CATG 4 cut(s) 10, 74, 114, 168
CviJI RGCY 3 cut(s) 112, 125, 156
CviKI_1 RGCY 3 cut(s) 112, 125, 156
CviQI GTAC 2 cut(s) 49, 165
Eco57I CTGAAG 1 cut(s) 141
EcoRII CCWGG 1 cut(s) 156
FaeI CATG 4 cut(s) 13, 77, 117, 171
FaiI YATR 7 cut(s) 11, 75, 86, 115, 130, 169, 175
FatI CATG 4 cut(s) 9, 73, 113, 167
HaeIII GGCC 1 cut(s) 112
Hin1II CATG 4 cut(s) 13, 77, 117, 171
HindIII AAGCTT 1 cut(s) 123
HinfI GANTC 1 cut(s) 62
Hpy166II GTNNAC 1 cut(s) 96
Hpy188III TCNNGA 2 cut(s) 59, 74
Hpy8I GTNNAC 1 cut(s) 96
HpyCH4IV ACGT 1 cut(s) 177
HpySE526I ACGT 1 cut(s) 177
Hsp92II CATG 4 cut(s) 13, 77, 117, 171
KpnI GGTACC 1 cut(s) 52
LpnPI CCDG 4 cut(s) 65, 72, 143, 170
MaeII ACGT 1 cut(s) 177
MluCI AATT 2 cut(s) 104, 190
MnlI CCTC 2 cut(s) 15, 34
MseI TTAA 2 cut(s) 107, 188
MspR9I CCNGG 1 cut(s) 158
MvaI CCWGG 1 cut(s) 158
NlaIII CATG 4 cut(s) 13, 77, 117, 171
NlaIV GGNNCC 1 cut(s) 50
NspI RCATGY 1 cut(s) 171
PagI TCATGA 1 cut(s) 73
PciI ACATGT 1 cut(s) 167
PfeI GAWTC 1 cut(s) 62
Ppu21I YACGTR 1 cut(s) 178
PscI ACATGT 1 cut(s) 167
Psp6I CCWGG 1 cut(s) 156
PspGI CCWGG 1 cut(s) 156
PspN4I GGNNCC 1 cut(s) 50
RsaI GTAC 2 cut(s) 50, 166
RsaNI GTAC 2 cut(s) 49, 165
SaqAI TTAA 2 cut(s) 107, 188
ScrFI CCNGG 1 cut(s) 158
SetI ASST 3 cut(s) 127, 162, 180
Sse9I AATT 2 cut(s) 104, 190
StyD4I CCNGG 1 cut(s) 156
TaiI ACGT 1 cut(s) 180
TasI AATT 2 cut(s) 104, 190
TfiI GAWTC 1 cut(s) 62
Tru1I TTAA 2 cut(s) 107, 188
Tru9I TTAA 2 cut(s) 107, 188
TscAI CASTG 1 cut(s) 98
TspRI CASTG 1 cut(s) 98
XceI RCATGY 1 cut(s) 171
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.