pycom04g01880

phosphoribosylformylglycinamidine synthase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
N/A
Physical Location & Seq
Reverse (-)
1691043 .. 1691460
418 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 294 bp
ATGGCCGGTATTCGGGAAACAGCCGCCGCCGAGTTCTTACGAGGCACGAATAGGCAGAGCCTTTTTTTGCAGAGGAACTCGGTTAAGGGAAGAAGCCAGGTGCTTTGGGGCTCGCTTCACGGGAGAAGTTCAGCTCCCAGTTTTGGTAATAGGAGAGGTGTTTCTTTGAGGTGTCGTGCTCAAGAAAAGCCCAGAGCTGTGGTTTCTGGTGGTGTGAGCAGCTTGGTAGATGATGAGCAGTCAAGCTTGGTTGAGAAGCCTGCAGCTGAAGTTATTCTTTTTTTTTTTTTCTGA

Protein Analysis

98

Amino Acids

10.61

Weight (kDa)

11.1

Isoelectric Point (pI)

55.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 24, 27
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 1 cut(s) 288
AfiI CCNNNNNNNGG 2 cut(s) 12, 143
AjnI CCWGG 1 cut(s) 96
AluBI AGCT 5 cut(s) 134, 197, 222, 246, 266
AluI AGCT 5 cut(s) 134, 197, 222, 246, 266
Alw21I GWGCWC 1 cut(s) 181
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 2 cut(s) 219, 263
Asp700I GAANNNNTTC 1 cut(s) 273
BanII GRGCYC 1 cut(s) 113
Bbv12I GWGCWC 1 cut(s) 181
BbvI GCAGC 2 cut(s) 231, 275
BciT130I CCWGG 1 cut(s) 98
BfmI CTRYAG 1 cut(s) 261
BisI GCNGC 4 cut(s) 24, 27, 220, 264
BlsI GCNGC 4 cut(s) 25, 28, 221, 265
Bme1390I CCNGG 1 cut(s) 98
BmrFI CCNGG 1 cut(s) 98
BmrI ACTGGG 1 cut(s) 132
BmuI ACTGGG 1 cut(s) 132
BpuEI CTTGAG 1 cut(s) 165
Bsc4I CCNNNNNNNGG 2 cut(s) 12, 143
Bse118I RCCGGY 1 cut(s) 5
Bse1I ACTGG 1 cut(s) 138
BseBI CCWGG 1 cut(s) 98
BseLI CCNNNNNNNGG 2 cut(s) 12, 143
BseNI ACTGG 1 cut(s) 138
BseXI GCAGC 2 cut(s) 231, 275
BshFI GGCC 1 cut(s) 5
BsiHKAI GWGCWC 1 cut(s) 181
BsiSI CCGG 1 cut(s) 6
BslI CCNNNNNNNGG 2 cut(s) 12, 143
BsnI GGCC 1 cut(s) 5
Bsp1286I GDGCHC 2 cut(s) 113, 181
BspACI CCGC 2 cut(s) 24, 27
BspANI GGCC 1 cut(s) 5
BspMAI CTGCAG 1 cut(s) 265
BsrFI RCCGGY 1 cut(s) 5
BsrI ACTGG 1 cut(s) 138
BssAI RCCGGY 1 cut(s) 5
Bst2UI CCWGG 1 cut(s) 98
BstC8I GCNNGC 2 cut(s) 113, 261
BstNI CCWGG 1 cut(s) 98
BstSCI CCNGG 1 cut(s) 96
BstSFI CTRYAG 1 cut(s) 261
BstV1I GCAGC 2 cut(s) 231, 275
BstXI CCANNNNNNTGG 1 cut(s) 199
BsuRI GGCC 1 cut(s) 5
Cac8I GCNNGC 2 cut(s) 113, 261
Cfr10I RCCGGY 1 cut(s) 5
EaeI YGGCCR 1 cut(s) 3
Eco24I GRGCYC 1 cut(s) 113
Eco57I CTGAAG 1 cut(s) 288
EcoRII CCWGG 1 cut(s) 96
EcoT38I GRGCYC 1 cut(s) 113
FalI AAGNNNNNCTT 2 cut(s) 261, 293
Fnu4HI GCNGC 4 cut(s) 24, 27, 220, 264
FriOI GRGCYC 1 cut(s) 113
Fsp4HI GCNGC 4 cut(s) 24, 27, 220, 264
GluI GCNGC 4 cut(s) 24, 27, 220, 264
HaeIII GGCC 1 cut(s) 5
HapII CCGG 1 cut(s) 6
HindIII AAGCTT 1 cut(s) 244
HpaII CCGG 1 cut(s) 6
Hpy188I TCNGA 1 cut(s) 293
Hpy188III TCNNGA 2 cut(s) 14, 182
HpyCH4V TGCA 2 cut(s) 70, 263
LmnI GCTCC 1 cut(s) 139
LpnPI CCDG 7 cut(s) 19, 83, 110, 151, 192, 205, 273
Lsp1109I GCAGC 2 cut(s) 231, 275
MboII GAAGA 1 cut(s) 102
MhlI GDGCHC 2 cut(s) 113, 181
MnlI CCTC 4 cut(s) 35, 66, 149, 162
MroXI GAANNNNTTC 1 cut(s) 273
MseI TTAA 1 cut(s) 84
MspA1I CMGCKG 1 cut(s) 266
MspI CCGG 1 cut(s) 6
MspR9I CCNGG 1 cut(s) 98
MvaI CCWGG 1 cut(s) 98
NmeAIII GCCGAG 1 cut(s) 55
PdmI GAANNNNTTC 1 cut(s) 273
PkrI GCNGC 4 cut(s) 25, 28, 221, 265
Psp6I CCWGG 1 cut(s) 96
PspGI CCWGG 1 cut(s) 96
PstI CTGCAG 1 cut(s) 265
PvuII CAGCTG 1 cut(s) 266
SaqAI TTAA 1 cut(s) 84
SatI GCNGC 4 cut(s) 24, 27, 220, 264
ScrFI CCNGG 1 cut(s) 98
SduI GDGCHC 2 cut(s) 113, 181
SetI ASST 8 cut(s) 102, 136, 160, 173, 199, 224, 248, 268
SfcI CTRYAG 1 cut(s) 261
SmlI CTYRAG 1 cut(s) 180
SmoI CTYRAG 1 cut(s) 180
SsiI CCGC 2 cut(s) 24, 27
StyD4I CCNGG 1 cut(s) 96
TauI GCSGC 2 cut(s) 26, 29
Tru1I TTAA 1 cut(s) 84
Tru9I TTAA 1 cut(s) 84
TseI GCWGC 2 cut(s) 219, 263
XmnI GAANNNNTTC 1 cut(s) 273
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.