pycom04g02330

Epidermal growth factor receptor substrate 15-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
N/A
Physical Location & Seq
Forward (+)
2087703 .. 2090536
2834 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 240 bp
ATGAACAAAAGTGGAGTAGGTTTGTTAATGGTTGTCTACATTTGTTTGTGGTGCAGGGTGGATGAGCTTAAAATCTTGACCGAGGAATATTTAGTCGATATGGCTATCAAGGAAGCATTTAAGATTTGGGCACGTGCAGACCCGGGGCAGACTAGTTTGCTTGGTCAGGCAGAGTTTTACAATGCCCTTAGAATTGTCACTGTGGCACAAGTAAGAGAGAACTTACGCAAGAAATGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

80

Amino Acids

9.15

Weight (kDa)

8.66

Isoelectric Point (pI)

19.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 36
AcvI CACGTG 1 cut(s) 134
AhlI ACTAGT 1 cut(s) 152
AluBI AGCT 1 cut(s) 67
AluI AGCT 1 cut(s) 67
Ama87I CYCGRG 1 cut(s) 142
AsuC2I CCSGG 2 cut(s) 143, 144
AvaI CYCGRG 1 cut(s) 142
BaeGI GKGCMC 1 cut(s) 133
BbrPI CACGTG 1 cut(s) 134
BcnI CCSGG 2 cut(s) 143, 144
BcuI ACTAGT 1 cut(s) 152
BfaI CTAG 1 cut(s) 153
Bme1390I CCNGG 2 cut(s) 143, 144
BmeT110I CYCGRG 1 cut(s) 142
BmrFI CCNGG 2 cut(s) 143, 144
BpuMI CCSGG 2 cut(s) 143, 144
BsaAI YACGTR 1 cut(s) 134
BsaJI CCNNGG 3 cut(s) 81, 142, 143
BseDI CCNNGG 3 cut(s) 81, 142, 143
BseGI GGATG 1 cut(s) 67
BseSI GKGCMC 1 cut(s) 133
BsgI GTGCAG 2 cut(s) 73, 156
BsiHKCI CYCGRG 1 cut(s) 142
BsiSI CCGG 1 cut(s) 143
BsoBI CYCGRG 1 cut(s) 142
Bsp1286I GDGCHC 1 cut(s) 133
BssECI CCNNGG 3 cut(s) 81, 142, 143
Bst4CI ACNGT 1 cut(s) 202
BstBAI YACGTR 1 cut(s) 134
BstDEI CTNAG 1 cut(s) 188
BstF5I GGATG 1 cut(s) 67
BstSCI CCNGG 2 cut(s) 141, 142
BstSLI GKGCMC 1 cut(s) 133
BtsCI GGATG 1 cut(s) 67
BtsIMutI CAGTG 1 cut(s) 198
Cfr9I CCCGGG 1 cut(s) 142
CviJI RGCY 2 cut(s) 67, 104
CviKI_1 RGCY 2 cut(s) 67, 104
DdeI CTNAG 1 cut(s) 188
Eco72I CACGTG 1 cut(s) 134
Eco88I CYCGRG 1 cut(s) 142
FaiI YATR 1 cut(s) 101
FblI GTMKAC 1 cut(s) 36
FokI GGATG 1 cut(s) 74
FspBI CTAG 1 cut(s) 153
HapII CCGG 1 cut(s) 143
HpaII CCGG 1 cut(s) 143
Hpy166II GTNNAC 1 cut(s) 37
Hpy188III TCNNGA 1 cut(s) 76
Hpy8I GTNNAC 1 cut(s) 37
HpyCH4III ACNGT 1 cut(s) 202
HpyCH4IV ACGT 1 cut(s) 133
HpyCH4V TGCA 2 cut(s) 54, 137
HpyF3I CTNAG 1 cut(s) 188
HpySE526I ACGT 1 cut(s) 133
LpnPI CCDG 3 cut(s) 40, 152, 156
MaeI CTAG 1 cut(s) 153
MaeII ACGT 1 cut(s) 133
MaeIII GTNAC 1 cut(s) 196
MhlI GDGCHC 1 cut(s) 133
MluCI AATT 1 cut(s) 192
MnlI CCTC 1 cut(s) 76
MseI TTAA 3 cut(s) 26, 69, 120
MspI CCGG 1 cut(s) 143
MspR9I CCNGG 2 cut(s) 143, 144
NciI CCSGG 2 cut(s) 143, 144
NmuCI GTSAC 1 cut(s) 196
PmaCI CACGTG 1 cut(s) 134
PmlI CACGTG 1 cut(s) 134
Ppu21I YACGTR 1 cut(s) 134
PspCI CACGTG 1 cut(s) 134
SaqAI TTAA 3 cut(s) 26, 69, 120
ScrFI CCNGG 2 cut(s) 143, 144
SduI GDGCHC 1 cut(s) 133
SetI ASST 3 cut(s) 22, 69, 136
SmaI CCCGGG 1 cut(s) 144
SpeI ACTAGT 1 cut(s) 152
Sse9I AATT 1 cut(s) 192
SspI AATATT 1 cut(s) 89
SspMI CTAG 1 cut(s) 153
StyD4I CCNGG 2 cut(s) 141, 142
TaaI ACNGT 1 cut(s) 202
TaiI ACGT 1 cut(s) 136
TaqI TCGA 1 cut(s) 96
TaqII GACCGA 1 cut(s) 95
TasI AATT 1 cut(s) 192
Tru1I TTAA 3 cut(s) 26, 69, 120
Tru9I TTAA 3 cut(s) 26, 69, 120
TscAI CASTG 1 cut(s) 205
TseFI GTSAC 1 cut(s) 196
Tsp45I GTSAC 1 cut(s) 196
TspDTI ATGAA 1 cut(s) 17
TspMI CCCGGG 1 cut(s) 142
TspRI CASTG 1 cut(s) 205
XmaI CCCGGG 1 cut(s) 142
XmiI GTMKAC 1 cut(s) 36
XspI CTAG 1 cut(s) 153
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.