pycom04g03250

Serine threonine-protein kinase-like protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
N/A
Physical Location & Seq
Forward (+)
2970885 .. 2971246
362 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 321 bp
ATGTCAATATGGGATAAAAATTGTTCACTTCTTCTCCCTCTTCTCTTCCCCGATCCTTCCGACTCCTCCCTCTTCACCCCTCCCTTCTTTCTCCCCAGATCAACCTTCACCCACCTTAACCCAAACTACGCCGCCCCCGTCGCCTTCCTCAGTGCCATCGCCCAACCCATCCTCTCCTACCTCTCCCAAACCTCCCTCATTTCTTTCCTCTATGGCCACCCAACCCTCTTCATTTCCATACATCAAAACTTAGTCTTCCTACAAACATGTAGCCACACATCCCTGAATCAACAAACTTGGGCTTGGAGGACTTGGAATTGA

Protein Analysis

107

Amino Acids

12.09

Weight (kDa)

6.88

Isoelectric Point (pI)

42.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 132
AclWI GGATC 1 cut(s) 47
AcoI YGGCCR 1 cut(s) 214
AflIII ACRYGT 1 cut(s) 266
AlwI GGATC 1 cut(s) 47
AoxI GGCC 1 cut(s) 214
AsuHPI GGTGA 2 cut(s) 67, 100
BalI TGGCCA 1 cut(s) 216
BbsI GAAGAC 1 cut(s) 247
BccI CCATC 2 cut(s) 164, 176
BisI GCNGC 1 cut(s) 132
BlsI GCNGC 1 cut(s) 133
BpiI GAAGAC 1 cut(s) 247
BsaXI ACNNNNNCTCC 2 cut(s) 18, 48
BseGI GGATG 2 cut(s) 168, 278
BseMII CTCAG 1 cut(s) 163
BseRI GAGGAG 1 cut(s) 55
BshFI GGCC 1 cut(s) 216
BsnI GGCC 1 cut(s) 216
Bsp143I GATC 2 cut(s) 52, 98
BspACI CCGC 1 cut(s) 132
BspANI GGCC 1 cut(s) 216
BspCNI CTCAG 1 cut(s) 162
BspPI GGATC 1 cut(s) 47
BssMI GATC 2 cut(s) 52, 98
Bst6I CTCTTC 4 cut(s) 45, 50, 77, 233
BstDEI CTNAG 2 cut(s) 149, 250
BstF5I GGATG 2 cut(s) 168, 278
BstKTI GATC 2 cut(s) 55, 101
BstMBI GATC 2 cut(s) 52, 98
BstMWI GCNNNNNNNGC 1 cut(s) 140
BstNSI RCATGY 1 cut(s) 270
BstV2I GAAGAC 1 cut(s) 247
BsuRI GGCC 1 cut(s) 216
BtgZI GCGATG 1 cut(s) 142
BtsCI GGATG 2 cut(s) 168, 278
BtsIMutI CAGTG 1 cut(s) 157
CviAII CATG 1 cut(s) 267
CviJI RGCY 3 cut(s) 216, 273, 302
CviKI_1 RGCY 3 cut(s) 216, 273, 302
DdeI CTNAG 2 cut(s) 149, 250
DpnI GATC 2 cut(s) 54, 100
DpnII GATC 2 cut(s) 52, 98
EaeI YGGCCR 1 cut(s) 214
Eam1104I CTCTTC 4 cut(s) 45, 50, 77, 233
EarI CTCTTC 4 cut(s) 45, 50, 77, 233
FaeI CATG 1 cut(s) 270
FaiI YATR 4 cut(s) 10, 213, 239, 268
FatI CATG 1 cut(s) 266
Fnu4HI GCNGC 1 cut(s) 132
FokI GGATG 2 cut(s) 155, 265
Fsp4HI GCNGC 1 cut(s) 132
GluI GCNGC 1 cut(s) 132
HaeIII GGCC 1 cut(s) 216
Hin1II CATG 1 cut(s) 270
HinfI GANTC 2 cut(s) 62, 286
HphI GGTGA 2 cut(s) 67, 100
Hpy166II GTNNAC 1 cut(s) 26
Hpy188I TCNGA 1 cut(s) 61
Hpy8I GTNNAC 1 cut(s) 26
Hpy99I CGWCG 1 cut(s) 143
HpyAV CCTTC 4 cut(s) 66, 94, 115, 154
HpyF10VI GCNNNNNNNGC 1 cut(s) 140
HpyF3I CTNAG 2 cut(s) 149, 250
Hsp92II CATG 1 cut(s) 270
Kzo9I GATC 2 cut(s) 52, 98
LpnPI CCDG 2 cut(s) 109, 296
MalI GATC 2 cut(s) 54, 100
MboI GATC 2 cut(s) 52, 98
MboII GAAGA 6 cut(s) 23, 32, 37, 64, 220, 247
MlsI TGGCCA 1 cut(s) 216
MluCI AATT 2 cut(s) 19, 316
MluNI TGGCCA 1 cut(s) 216
MlyI GAGTC 1 cut(s) 56
MmeI TCCRAC 1 cut(s) 84
Mox20I TGGCCA 1 cut(s) 216
MscI TGGCCA 1 cut(s) 216
MseI TTAA 1 cut(s) 117
Msp20I TGGCCA 1 cut(s) 216
MwoI GCNNNNNNNGC 1 cut(s) 140
NdeII GATC 2 cut(s) 52, 98
NlaIII CATG 1 cut(s) 270
NspI RCATGY 1 cut(s) 270
PciI ACATGT 1 cut(s) 266
PcsI WCGNNNNNNNCGW 1 cut(s) 135
PfeI GAWTC 1 cut(s) 286
PkrI GCNGC 1 cut(s) 133
PleI GAGTC 1 cut(s) 56
PpsI GAGTC 1 cut(s) 56
PscI ACATGT 1 cut(s) 266
SaqAI TTAA 1 cut(s) 117
SatI GCNGC 1 cut(s) 132
Sau3AI GATC 2 cut(s) 52, 98
SchI GAGTC 1 cut(s) 56
SetI ASST 4 cut(s) 107, 117, 183, 194
SgeI CNNG 7 cut(s) 62, 108, 149, 279, 295, 309, 315
Sse9I AATT 2 cut(s) 19, 316
SsiI CCGC 1 cut(s) 132
TasI AATT 2 cut(s) 19, 316
TauI GCSGC 1 cut(s) 134
TfiI GAWTC 1 cut(s) 286
Tru1I TTAA 1 cut(s) 117
Tru9I TTAA 1 cut(s) 117
TscAI CASTG 1 cut(s) 157
TspDTI ATGAA 1 cut(s) 220
TspRI CASTG 1 cut(s) 157
XceI RCATGY 1 cut(s) 270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.