pycom04g04830

Sulfate transporter

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
N/A
Physical Location & Seq
Forward (+)
4468578 .. 4469231
654 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 231 bp
ATGACCTTGAATGTCATGGTGATGAAAGGAGATGTCAAGTATCCTCTTTGTCTGGATCTCAAAGTGGTACATGAGGAGGAAGATAAAATAAAATCTTTTGGAGAAACAAGCTTACACTATGTTATAATACATATTGGCAGTAACATCGATACTAGCGGGATCACCAAGCTTGAAGAGGTCCAGAAAAATGTAGACAGAAAGTGTCTCAAGCAAACCCCCGAAGTAAGGTGA

Protein Analysis

77

Amino Acids

8.69

Weight (kDa)

6.27

Isoelectric Point (pI)

39.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 125
AccI GTMKAC 1 cut(s) 192
AciI CCGC 1 cut(s) 156
AclWI GGATC 2 cut(s) 63, 167
AfaI GTAC 1 cut(s) 69
AfiI CCNNNNNNNGG 1 cut(s) 225
AgsI TTSAA 2 cut(s) 10, 173
AluBI AGCT 2 cut(s) 111, 169
AluI AGCT 2 cut(s) 111, 169
Alw26I GTCTC 1 cut(s) 209
AlwI GGATC 2 cut(s) 63, 167
AspS9I GGNCC 1 cut(s) 178
AsuHPI GGTGA 2 cut(s) 31, 154
AvaII GGWCC 1 cut(s) 178
BcgI CGANNNNNNTGC 2 cut(s) 127, 161
BciVI GTATCC 1 cut(s) 51
BcoDI GTCTC 1 cut(s) 209
BfaI CTAG 1 cut(s) 153
BfuI GTATCC 1 cut(s) 51
Bme18I GGWCC 1 cut(s) 178
BmgT120I GGNCC 1 cut(s) 178
BpuEI CTTGAG 1 cut(s) 191
Bsa29I ATCGAT 1 cut(s) 147
Bsc4I CCNNNNNNNGG 1 cut(s) 225
BseCI ATCGAT 1 cut(s) 147
BseLI CCNNNNNNNGG 1 cut(s) 225
BseRI GAGGAG 1 cut(s) 89
BshVI ATCGAT 1 cut(s) 147
BslI CCNNNNNNNGG 1 cut(s) 225
BsmAI GTCTC 1 cut(s) 209
Bsp143I GATC 2 cut(s) 55, 159
BspACI CCGC 1 cut(s) 156
BspDI ATCGAT 1 cut(s) 147
BspPI GGATC 2 cut(s) 63, 167
BssMI GATC 2 cut(s) 55, 159
Bst6I CTCTTC 1 cut(s) 168
BstKTI GATC 2 cut(s) 58, 162
BstMAI GTCTC 1 cut(s) 209
BstMBI GATC 2 cut(s) 55, 159
BstX2I RGATCY 1 cut(s) 55
BstYI RGATCY 1 cut(s) 55
Bsu15I ATCGAT 1 cut(s) 147
BsuI GTATCC 1 cut(s) 51
BsuTUI ATCGAT 1 cut(s) 147
Cfr13I GGNCC 1 cut(s) 178
ClaI ATCGAT 1 cut(s) 147
Csp6I GTAC 1 cut(s) 68
CviAII CATG 2 cut(s) 16, 71
CviJI RGCY 2 cut(s) 111, 169
CviKI_1 RGCY 2 cut(s) 111, 169
CviQI GTAC 1 cut(s) 68
DpnI GATC 2 cut(s) 57, 161
DpnII GATC 2 cut(s) 55, 159
Eam1104I CTCTTC 1 cut(s) 168
EarI CTCTTC 1 cut(s) 168
Eco47I GGWCC 1 cut(s) 178
FaeI CATG 2 cut(s) 19, 74
FaiI YATR 5 cut(s) 17, 72, 120, 125, 132
FatI CATG 2 cut(s) 15, 70
FauI CCCGC 1 cut(s) 149
FblI GTMKAC 1 cut(s) 192
FspBI CTAG 1 cut(s) 153
Hin1II CATG 2 cut(s) 19, 74
HindIII AAGCTT 2 cut(s) 109, 167
HphI GGTGA 2 cut(s) 31, 154
Hpy166II GTNNAC 1 cut(s) 193
Hpy188III TCNNGA 2 cut(s) 53, 181
Hpy8I GTNNAC 1 cut(s) 193
Hsp92II CATG 2 cut(s) 19, 74
Kzo9I GATC 2 cut(s) 55, 159
LpnPI CCDG 2 cut(s) 38, 194
MaeI CTAG 1 cut(s) 153
MaeIII GTNAC 1 cut(s) 140
MalI GATC 2 cut(s) 57, 161
MboI GATC 2 cut(s) 55, 159
MboII GAAGA 2 cut(s) 92, 185
MflI RGATCY 1 cut(s) 55
MnlI CCTC 4 cut(s) 54, 67, 70, 169
MslI CAYNNNNRTG 1 cut(s) 20
NdeII GATC 2 cut(s) 55, 159
NlaIII CATG 2 cut(s) 19, 74
PsiI TTATAA 1 cut(s) 125
PspPI GGNCC 1 cut(s) 178
PsuI RGATCY 1 cut(s) 55
RsaI GTAC 1 cut(s) 69
RsaNI GTAC 1 cut(s) 68
RseI CAYNNNNRTG 1 cut(s) 20
Sau3AI GATC 2 cut(s) 55, 159
Sau96I GGNCC 1 cut(s) 178
SetI ASST 5 cut(s) 8, 113, 171, 180, 230
SinI GGWCC 1 cut(s) 178
SmiMI CAYNNNNRTG 1 cut(s) 20
SmlI CTYRAG 1 cut(s) 206
SmoI CTYRAG 1 cut(s) 206
SsiI CCGC 1 cut(s) 156
SspMI CTAG 1 cut(s) 153
TaqI TCGA 1 cut(s) 147
TspDTI ATGAA 1 cut(s) 38
VpaK11BI GGWCC 1 cut(s) 178
XmiI GTMKAC 1 cut(s) 192
XspI CTAG 1 cut(s) 153
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.