pycom04g04990
NAC Family

Inactive beta-amylase 4

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
N/A
Physical Location & Seq
Forward (+)
4649370 .. 4649570
201 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 201 bp
ATGAATGGTACAGTGGTAGGTTGCTCCCTCATGCAGATGATATTCTTGCAAAGGCAGTTAACAAGTCTGAAGAAATATCAAGAAAATAAGCAAACTTCTATTCTATTCGCCGCTAAAATTGGTCGAATATATTGGTGGTACCAGACGATAGCACAGCCTGCTGAACTTACGTACAACTGGATACTGCAACACTGCTCTTAG

Protein Analysis

67

Amino Acids

7.79

Weight (kDa)

9.39

Isoelectric Point (pI)

32.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 138
AccB1I GGYRCC 1 cut(s) 138
AciI CCGC 1 cut(s) 111
AcuI CTGAAG 1 cut(s) 89
AfaI GTAC 3 cut(s) 10, 140, 173
Asp718I GGTACC 1 cut(s) 138
BaeI ACNNNNGTAYC 1 cut(s) 33
BanI GGYRCC 1 cut(s) 138
BciVI GTATCC 1 cut(s) 174
BfuI GTATCC 1 cut(s) 174
BisI GCNGC 1 cut(s) 111
BlsI GCNGC 1 cut(s) 112
BmiI GGNNCC 1 cut(s) 140
BsaAI YACGTR 1 cut(s) 171
Bse1I ACTGG 1 cut(s) 182
BseNI ACTGG 1 cut(s) 182
BshNI GGYRCC 1 cut(s) 138
BspACI CCGC 1 cut(s) 111
BspLI GGNNCC 1 cut(s) 140
BspT107I GGYRCC 1 cut(s) 138
BsrI ACTGG 1 cut(s) 182
Bst4CI ACNGT 1 cut(s) 13
BstAPI GCANNNNNTGC 1 cut(s) 158
BstBAI YACGTR 1 cut(s) 171
BstC8I GCNNGC 1 cut(s) 159
BstDEI CTNAG 1 cut(s) 198
BstMWI GCNNNNNNNGC 1 cut(s) 158
BstSNI TACGTA 1 cut(s) 171
BsuI GTATCC 1 cut(s) 174
BtsI GCAGTG 1 cut(s) 190
BtsIMutI CAGTG 2 cut(s) 18, 190
Cac8I GCNNGC 1 cut(s) 159
Csp6I GTAC 3 cut(s) 9, 139, 172
CviAII CATG 1 cut(s) 31
CviJI RGCY 1 cut(s) 157
CviKI_1 RGCY 1 cut(s) 157
CviQI GTAC 3 cut(s) 9, 139, 172
DdeI CTNAG 1 cut(s) 198
Eco105I TACGTA 1 cut(s) 171
Eco57I CTGAAG 1 cut(s) 89
FaeI CATG 1 cut(s) 34
FaiI YATR 2 cut(s) 32, 130
FatI CATG 1 cut(s) 30
Fnu4HI GCNGC 1 cut(s) 111
Fsp4HI GCNGC 1 cut(s) 111
GluI GCNGC 1 cut(s) 111
Hin1II CATG 1 cut(s) 34
HincII GTYRAC 1 cut(s) 60
HindII GTYRAC 1 cut(s) 60
HpaI GTTAAC 1 cut(s) 60
Hpy166II GTNNAC 1 cut(s) 60
Hpy188I TCNGA 1 cut(s) 69
Hpy188III TCNNGA 1 cut(s) 80
Hpy8I GTNNAC 1 cut(s) 60
HpyCH4III ACNGT 1 cut(s) 13
HpyCH4IV ACGT 1 cut(s) 170
HpyCH4V TGCA 3 cut(s) 34, 49, 187
HpyF10VI GCNNNNNNNGC 1 cut(s) 158
HpyF3I CTNAG 1 cut(s) 198
HpySE526I ACGT 1 cut(s) 170
Hsp92II CATG 1 cut(s) 34
KpnI GGTACC 1 cut(s) 142
KspAI GTTAAC 1 cut(s) 60
LmnI GCTCC 1 cut(s) 29
LpnPI CCDG 3 cut(s) 155, 163, 171
MaeII ACGT 1 cut(s) 170
MboII GAAGA 1 cut(s) 82
MluCI AATT 1 cut(s) 117
MnlI CCTC 1 cut(s) 38
MseI TTAA 1 cut(s) 59
MslI CAYNNNNRTG 1 cut(s) 35
MwoI GCNNNNNNNGC 1 cut(s) 158
NlaIII CATG 1 cut(s) 34
NlaIV GGNNCC 1 cut(s) 140
PkrI GCNGC 1 cut(s) 112
Ppu21I YACGTR 1 cut(s) 171
PspN4I GGNNCC 1 cut(s) 140
RsaI GTAC 3 cut(s) 10, 140, 173
RsaNI GTAC 3 cut(s) 9, 139, 172
RseI CAYNNNNRTG 1 cut(s) 35
SaqAI TTAA 1 cut(s) 59
SatI GCNGC 1 cut(s) 111
SetI ASST 2 cut(s) 22, 173
SgeI CNNG 7 cut(s) 43, 58, 75, 92, 154, 170, 190
SmiMI CAYNNNNRTG 1 cut(s) 35
SnaBI TACGTA 1 cut(s) 171
Sse9I AATT 1 cut(s) 117
SsiI CCGC 1 cut(s) 111
TaaI ACNGT 1 cut(s) 13
TaiI ACGT 1 cut(s) 173
TaqI TCGA 1 cut(s) 124
TasI AATT 1 cut(s) 117
TauI GCSGC 1 cut(s) 113
Tru1I TTAA 1 cut(s) 59
Tru9I TTAA 1 cut(s) 59
TscAI CASTG 2 cut(s) 18, 197
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 2 cut(s) 18, 197
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.