pycom04g07210

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
N/A
Physical Location & Seq
Reverse (-)
7612962 .. 7613421
460 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 309 bp
ATGGGAGAGGATATTGTGGTGGGTGGGACTGACATTTCCTCCAACACAACTGAGTTTGCACTGGCTGAAATCATGAACAAACCAGAGATGATGGAAAAAGCCCAGCAAGAATTAGAAGATGTGGTTGGCAAACACAACATTGTAGAAGAATCCCACATCAACAAATTACCATACTTACAAGTTGTGATGAAAGAAACTCTGCGCTTGCACCTAATCTTGCCTCTGTTAATCCCTCGTTGCCCAAGTGAAACTTGCATTGTGGGAGGCTACACCATTCCCATAGGATCTTGGATTTTCGTCAACATTTAG

Protein Analysis

103

Amino Acids

11.39

Weight (kDa)

4.76

Isoelectric Point (pI)

54.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 4 - 102 3.2e-27 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 292
AjuI GAANNNNNNNTTGG 2 cut(s) 108, 140
AlwI GGATC 1 cut(s) 292
AspLEI GCGC 1 cut(s) 204
BccI CCATC 1 cut(s) 85
BsaXI ACNNNNNCTCC 2 cut(s) 23, 53
Bse1I ACTGG 1 cut(s) 66
BseMII CTCAG 1 cut(s) 42
BseNI ACTGG 1 cut(s) 66
BseYI CCCAGC 1 cut(s) 102
BslFI GGGAC 1 cut(s) 40
BsmFI GGGAC 1 cut(s) 40
Bsp143I GATC 1 cut(s) 284
BspCNI CTCAG 1 cut(s) 43
BspHI TCATGA 1 cut(s) 72
BspPI GGATC 1 cut(s) 292
BsrI ACTGG 1 cut(s) 66
BssMI GATC 1 cut(s) 284
BstC8I GCNNGC 1 cut(s) 206
BstDEI CTNAG 1 cut(s) 51
BstHHI GCGC 1 cut(s) 204
BstKTI GATC 1 cut(s) 287
BstMBI GATC 1 cut(s) 284
BstX2I RGATCY 1 cut(s) 284
BstYI RGATCY 1 cut(s) 284
BtsIMutI CAGTG 1 cut(s) 59
Cac8I GCNNGC 1 cut(s) 206
CciI TCATGA 1 cut(s) 72
CfoI GCGC 1 cut(s) 204
CviAII CATG 1 cut(s) 73
CviJI RGCY 3 cut(s) 65, 101, 267
CviKI_1 RGCY 3 cut(s) 65, 101, 267
DdeI CTNAG 1 cut(s) 51
DpnI GATC 1 cut(s) 286
DpnII GATC 1 cut(s) 284
FaeI CATG 1 cut(s) 76
FaiI YATR 3 cut(s) 74, 172, 281
FalI AAGNNNNNCTT 2 cut(s) 235, 267
FaqI GGGAC 1 cut(s) 40
FatI CATG 1 cut(s) 72
GlaI GCGC 1 cut(s) 203
GsaI CCCAGC 1 cut(s) 106
HhaI GCGC 1 cut(s) 204
Hin1II CATG 1 cut(s) 76
Hin6I GCGC 1 cut(s) 202
HinP1I GCGC 1 cut(s) 202
HincII GTYRAC 1 cut(s) 301
HindII GTYRAC 1 cut(s) 301
HinfI GANTC 1 cut(s) 149
Hpy166II GTNNAC 1 cut(s) 301
Hpy188III TCNNGA 1 cut(s) 73
Hpy8I GTNNAC 1 cut(s) 301
HpyCH4V TGCA 3 cut(s) 59, 208, 255
HpyF3I CTNAG 1 cut(s) 51
Hsp92II CATG 1 cut(s) 76
HspAI GCGC 1 cut(s) 202
Kzo9I GATC 1 cut(s) 284
LpnPI CCDG 3 cut(s) 47, 96, 116
MalI GATC 1 cut(s) 286
MboI GATC 1 cut(s) 284
MboII GAAGA 2 cut(s) 128, 158
MflI RGATCY 1 cut(s) 284
MluCI AATT 2 cut(s) 110, 164
MmeI TCCRAC 1 cut(s) 66
MnlI CCTC 4 cut(s) 49, 231, 243, 257
MseI TTAA 1 cut(s) 227
NdeII GATC 1 cut(s) 284
NlaIII CATG 1 cut(s) 76
PagI TCATGA 1 cut(s) 72
PfeI GAWTC 1 cut(s) 149
PspFI CCCAGC 1 cut(s) 102
PsuI RGATCY 1 cut(s) 284
SaqAI TTAA 1 cut(s) 227
Sau3AI GATC 1 cut(s) 284
SetI ASST 1 cut(s) 213
Sse9I AATT 2 cut(s) 110, 164
TasI AATT 2 cut(s) 110, 164
TfiI GAWTC 1 cut(s) 149
Tru1I TTAA 1 cut(s) 227
Tru9I TTAA 1 cut(s) 227
TscAI CASTG 1 cut(s) 66
TspDTI ATGAA 2 cut(s) 89, 203
TspRI CASTG 1 cut(s) 66
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.