pycom04g09670
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N- methyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
N/A
Physical Location & Seq
Reverse (-)
12382739 .. 12394599
11861 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 222 bp
ATGATAGTATTCATGAATAATAACAGTTTGAAGGGGAAGATTGAAGAACTTGAGCTTCCCGTCCCTAAAGTGGATATAATTATCTTTGAATGGATGGGATATTTCTTGTTGTTTGAGAATATGTTAAACACGGTCCTCTATGCTCCTGATAACTGGCTTGTAAATAGTATTTACATTCCAAATTTATTGTTTGTGATATGTTGGTCAAGAAGCAAGCCATGA

Protein Analysis

74

Amino Acids

8.64

Weight (kDa)

4.77

Isoelectric Point (pI)

33.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 181
AfiI CCNNNNNNNGG 1 cut(s) 70
AgsI TTSAA 3 cut(s) 31, 44, 89
AluBI AGCT 1 cut(s) 55
AluI AGCT 1 cut(s) 55
ApoI RAATTY 1 cut(s) 181
AspS9I GGNCC 1 cut(s) 133
AvaII GGWCC 1 cut(s) 133
BccI CCATC 1 cut(s) 88
Bme18I GGWCC 1 cut(s) 133
BmgT120I GGNCC 1 cut(s) 133
BpuEI CTTGAG 1 cut(s) 71
Bsc4I CCNNNNNNNGG 1 cut(s) 70
Bse1I ACTGG 1 cut(s) 158
BseGI GGATG 1 cut(s) 99
BseLI CCNNNNNNNGG 1 cut(s) 70
BseNI ACTGG 1 cut(s) 158
BslFI GGGAC 1 cut(s) 47
BslI CCNNNNNNNGG 1 cut(s) 70
BsmFI GGGAC 1 cut(s) 47
BspHI TCATGA 1 cut(s) 12
BsrI ACTGG 1 cut(s) 158
Bst4CI ACNGT 2 cut(s) 26, 133
BstC8I GCNNGC 1 cut(s) 215
BstF5I GGATG 1 cut(s) 99
BtsCI GGATG 1 cut(s) 99
Cac8I GCNNGC 1 cut(s) 215
CciI TCATGA 1 cut(s) 12
Cfr13I GGNCC 1 cut(s) 133
CviAII CATG 2 cut(s) 13, 219
CviJI RGCY 3 cut(s) 55, 157, 217
CviKI_1 RGCY 3 cut(s) 55, 157, 217
Eco47I GGWCC 1 cut(s) 133
FaeI CATG 2 cut(s) 16, 222
FaiI YATR 6 cut(s) 14, 77, 122, 141, 199, 220
FaqI GGGAC 1 cut(s) 47
FatI CATG 2 cut(s) 12, 218
FokI GGATG 1 cut(s) 106
Hin1II CATG 2 cut(s) 16, 222
Hpy188III TCNNGA 3 cut(s) 13, 146, 207
HpyAV CCTTC 1 cut(s) 25
HpyCH4III ACNGT 2 cut(s) 26, 133
Hsp92II CATG 2 cut(s) 16, 222
LmnI GCTCC 1 cut(s) 148
LpnPI CCDG 2 cut(s) 139, 159
MboII GAAGA 2 cut(s) 49, 56
MluCI AATT 2 cut(s) 78, 181
MnlI CCTC 1 cut(s) 146
MseI TTAA 1 cut(s) 125
NlaIII CATG 2 cut(s) 16, 222
PagI TCATGA 1 cut(s) 12
PspPI GGNCC 1 cut(s) 133
SaqAI TTAA 1 cut(s) 125
Sau96I GGNCC 1 cut(s) 133
SetI ASST 1 cut(s) 57
SgeI CNNG 8 cut(s) 25, 62, 71, 118, 142, 158, 166, 170
SinI GGWCC 1 cut(s) 133
SmlI CTYRAG 1 cut(s) 50
SmoI CTYRAG 1 cut(s) 50
Sse9I AATT 2 cut(s) 78, 181
TaaI ACNGT 2 cut(s) 26, 133
TasI AATT 2 cut(s) 78, 181
Tru1I TTAA 1 cut(s) 125
Tru9I TTAA 1 cut(s) 125
TspDTI ATGAA 1 cut(s) 29
VpaK11BI GGWCC 1 cut(s) 133
XapI RAATTY 1 cut(s) 181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.