Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

N/A

Physical Location & Seq

Genomic Coordinates Reverse (-)

12702417 .. 12705777

Gene Structure 3361 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2568 bp

ATGGAGAGTCGAGGTCAAAAGCGTACTGAGCTTGATGATGAATTGCCAGCAGATAAGCGGGTGTGTAATTCAATGGAGTTTAGAGCTATTTCGTCGAACTCTTCAGCTCAAACCCATATGAATTCTGTGAACTCCACACCTGAAACCAATGACCATGATATGGATACTTCATCTTCTGCTTCGGCTAATAGTCGCTCAGAGGGAGAACGTGAGAGGGATTCAGCATATGGGTCTTGTGATTCAGATGATGCAGACGAAAGACACAGTGAACTCAAGGACTATCAGAGACGGAGATCTTCGGGTGATCATCGAAAGTTTAAGAGGTTCTTATCATCTTTAAGTGAAGAGACTGACCCTTCAGGGCAGTTAGCTGTGCTCACCGAGCTATGTGAAGTCCTGTCATTTTGTACAGAGGATTCACTCTCCGGGATGACATCAGACTCATTGTCACGGCTTCTTGTTAGACTTGCTAGGCATGAGACTAACCCGAATATCATGCTATTGGCTATAAGGGCTATAACTTATTTATGCGATGTGTATCCGCATTCATCGGGCTTCCTTGTTAGGCATGATGCAGTTCCTGCTCTTTGCGACAGACTAATGGCTATTGAATACTTGGATGTAGCTGAACAGTGCCTACAAGCATTGGAGAAAATGTCACAGGAGCAACCACTTGCATGCTTACAGTCTGGGGCAATAATGGCTGTCCTGAATTATATAGATTTCTTTTCGACAAGTATACAGAGAGTTGCCCTTTCCACTGTGGTGAACATATGTAAGAAACTTCCTTCTGAATGTCCTTCACCCATCATGGAGGCTGTTCCCATTCTGTGCAATCTTCTCCAGTGTGAGGACCCACAGCTTGTCGAAAATGTTGCTGTTTGCTTGATTAAAATTACAGAACGAGTGAGTGAGTCTACAGAGATGCTGGATGAACTTTGTAAGCATGGGCTGATTCGTCAAGTCACACATTTTTTGAGCTTGAATACCCGACCAACGGTATCCCAGCTAATTAGTAATAGTTTGATGGGGGTACTTGTCAAACTTTCTTCTGGTTCAGTTGTAGCCTTCAGGACGCTGTATGAGCTTAATATTAGCAGCATACTGAAGGATATCTTATCTACATATGACCTCTCGCATGGAATGTTATCTAATCATGTGGTGGATGGGCATTGCAATCAGGTATATGAAGTTTTGAAATTGCTAAATGAGCTTCTTCCAACTTCGACCAGAGATCAAGAGAATCCACAGTTGTCAGATAAAGAATCTCTTTTAGTTAATCAGCCTGATCTTCTGCAAAAGTTTGGGATGGATATACTTCCATTGTTGATTCAGGTTGTAAACTCCGGTGCCAATTTATATATTTGCTATGGCTGCTTATCTGTTATCGACAAGTTAATTTATTTGAGCACACCTGGCATGCTTGTAGAACTGCTTCAGAAGGCCAACATTTCAAGTTTTTTGGCTGGAGTGTTTACACGAAAGGATCCCCATGTGTTGATATTAGCTCTACGGATTACTGAGCTAATCCTGCAGAAACTTTCTGATTATTTCTTGGACTCTTTCATAAAAGAAGGCGTCTTTTTTGCCATCGATGCACTGTTAACACCGGAAAAGTGTCAATTGGTGACCCTGAAAAAATGCTCGAGGTTGTTGTTCCCTGTGTTTAGTGGCTCACAGATTTTGTTCGATCCTCATCAGAAGTCTGCCTCGAGTGAGGTCTTGAGGTGCTTATGTTATGCTTTTGCTACTGATAAATCACCATCAGTGTCAGAAAAAGGAAGTTGCATGCTTGAAAAGGATTCTGTTTATAATCTTGCAAAGCATATAAGGACCAAGTACTTTGCACAAGAATTATGTGACCCTGAGAAAGCGTTAACTGATGTCCTTCAGAAGCTTAGAAAATGTTCTTCTGCATTAAGTGATTTGAACATGTCCATGAATGATGATGCTCTTGAACAGCGTGAAGAAAGGTTCTATAGTATCATGCATCAAGTAATGGAAAAGCTTGGTGGAGGAGAACCCATTTCCACGTTTGAATTTATTGAATCTGGAATTCTAAGGTCCTTAATGACTTACCTGTCCAATGGCCAGTACTTGAAACAAAAAGGGGAGCTTAGTAGTGGTAACAGTGATATTTATTCTGTAGAAAAAAGATTTGAGGTGTTTGCAAGGCTGTTATTTTCTCCTTTAGACATGATCCCTGCCGACCTGCCCATGATAACATTAATACGCAAACTGCAAAATGCACTATCTTCTTTGGAAAATTTCCCTGTTATTTTGAGCCATGTGCCCAAAATAAGTTCTTATGCTACAGTACCACTTGGGCGTCGCACACCATATCCATGTATTGAAGTTCGTTTTGTGAAAGACAAAGCAGAGACATGCCTTTGTGATTACCATGAAGATGTTCTGACTGTGGACCCTTTTTCCTCATTGCATGCCATTGAAGAATTTCTGTGGCCTAAAGTGAATGCAAAAACAACCAGCCACATTAGTTCAGCTACACAAGTTAAGGACCAATCTGAAAGTCCACTGGATCGATCACCATCCAAATGCAAGCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

HECT

Protein Analysis

856

Amino Acids

95.67

Weight (kDa)

5.36

Isoelectric Point (pI)

54.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_TRIP12_N	PF25579	4 - 229	6.4e-114	E3 ubiquitin-protein ligase TRIP12-like, TPR repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1812
AasI	GACNNNNNNGTC	1 cut(s)	2080
Acc36I	ACCTGC	1 cut(s)	2220
AccB1I	GGYRCC	1 cut(s)	1349
AccB7I	CCANNNNNTGG	1 cut(s)	160
AccI	GTMKAC	2 cut(s)	739, 917
AciI	CCGC	2 cut(s)	58, 542
AclWI	GGATC	5 cut(s)	1481, 1494, 1685, 2194, 2547
AcoI	YGGCCR	1 cut(s)	2089
AcsI	RAATTY	5 cut(s)	121, 2039, 2055, 2266, 2453
AcuI	CTGAAG	6 cut(s)	87, 342, 1054, 1127, 1421, 1874
AcyI	GRCGYC	2 cut(s)	1578, 2329
AfaI	GTAC	6 cut(s)	25, 409, 1035, 1841, 2096, 2319
AfiI	CCNNNNNNNGG	3 cut(s)	160, 850, 997
AflIII	ACRYGT	1 cut(s)	1932
AhdI	GACNNNNNGTC	1 cut(s)	445
AjnI	CCWGG	1 cut(s)	1414
AleI	CACNNNNGTG	1 cut(s)	764
Alw21I	GWGCWC	2 cut(s)	378, 1412
Alw26I	GTCTC	4 cut(s)	280, 341, 473, 2375
AlwI	GGATC	5 cut(s)	1481, 1494, 1685, 2194, 2547
AlwNI	CAGNNNCTG	1 cut(s)	581
Ama87I	CYCGRG	2 cut(s)	1645, 1711
AoxI	GGCC	3 cut(s)	1443, 2089, 2462
ApeKI	GCWGC	2 cut(s)	1098, 1374
ApoI	RAATTY	5 cut(s)	121, 2039, 2055, 2266, 2453
AseI	ATTAAT	1 cut(s)	2228
Asp700I	GAANNNNTTC	4 cut(s)	1434, 1906, 2409, 2454
AspS9I	GGNCC	5 cut(s)	853, 1833, 2064, 2422, 2518
AsuC2I	CCSGG	1 cut(s)	427
AsuHPI	GGTGA	7 cut(s)	314, 370, 778, 795, 1639, 1752, 2538
AvaI	CYCGRG	2 cut(s)	1645, 1711
AvaII	GGWCC	5 cut(s)	853, 1833, 2064, 2422, 2518
BaeGI	GKGCMC	1 cut(s)	2295
BalI	TGGCCA	1 cut(s)	2091
BamHI	GGATCC	1 cut(s)	1486
BanI	GGYRCC	1 cut(s)	1349
BarI	GAAGNNNNNNTAC	2 cut(s)	1419, 1451
Bbv12I	GWGCWC	2 cut(s)	378, 1412
BbvI	GCAGC	2 cut(s)	1110, 1361
BccI	CCATC	7 cut(s)	815, 1021, 1160, 1303, 1598, 1771, 2557
BceAI	ACGGC	1 cut(s)	467
BcgI	CGANNNNNNTGC	4 cut(s)	478, 512, 857, 891
BciT130I	CCWGG	1 cut(s)	1416
BciVI	GTATCC	3 cut(s)	157, 549, 1012
BclI	TGATCA	1 cut(s)	304
BcnI	CCSGG	1 cut(s)	427
BcoDI	GTCTC	4 cut(s)	280, 341, 473, 2375
BfaI	CTAG	2 cut(s)	471, 2566
BfmI	CTRYAG	5 cut(s)	918, 1532, 1978, 2145, 2313
BfuAI	ACCTGC	1 cut(s)	2220
BfuI	GTATCC	3 cut(s)	157, 549, 1012
BglII	AGATCT	1 cut(s)	293
BisI	GCNGC	2 cut(s)	1099, 1375
BlsI	GCNGC	2 cut(s)	1100, 1376
BmcAI	AGTACT	2 cut(s)	1841, 2096
Bme1390I	CCNGG	2 cut(s)	427, 1416
Bme18I	GGWCC	5 cut(s)	853, 1833, 2064, 2422, 2518
BmeRI	GACNNNNNGTC	1 cut(s)	445
BmeT110I	CYCGRG	2 cut(s)	1645, 1711
BmgT120I	GGNCC	5 cut(s)	853, 1833, 2064, 2422, 2518
BmiI	GGNNCC	4 cut(s)	855, 1351, 1488, 2424
BmrFI	CCNGG	2 cut(s)	427, 1416
BmsI	GCATC	6 cut(s)	238, 562, 915, 1585, 1939, 1999
BpmI	CTGGAG	2 cut(s)	827, 1488
BpuEI	CTTGAG	2 cut(s)	257, 1744
BpuMI	CCSGG	1 cut(s)	427
Bsa29I	ATCGAT	2 cut(s)	1593, 2542
BsaBI	GATNNNNATC	3 cut(s)	537, 1695, 2548
BsaHI	GRCGYC	2 cut(s)	1578, 2329
BsaWI	WCCGGW	2 cut(s)	1346, 1609
BsaXI	ACNNNNNCTCC	2 cut(s)	641, 671
Bsc4I	CCNNNNNNNGG	3 cut(s)	160, 850, 997
Bse1I	ACTGG	3 cut(s)	844, 2092, 2541
Bse3DI	GCAATG	2 cut(s)	1171, 2435
Bse8I	GATNNNNATC	3 cut(s)	537, 1695, 2548
BseBI	CCWGG	1 cut(s)	1416
BseCI	ATCGAT	2 cut(s)	1593, 2542
BseGI	GGATG	6 cut(s)	435, 625, 937, 1171, 1314, 2549
BseJI	GATNNNNATC	3 cut(s)	537, 1695, 2548
BseLI	CCNNNNNNNGG	3 cut(s)	160, 850, 997
BseMI	GCAATG	2 cut(s)	1171, 2435
BseMII	CTCAG	4 cut(s)	18, 210, 1512, 1857
BseNI	ACTGG	3 cut(s)	844, 2092, 2541
BseRI	GAGGAG	1 cut(s)	2031
BseSI	GKGCMC	1 cut(s)	2295
BseXI	GCAGC	2 cut(s)	1110, 1361
BseYI	CCCAGC	1 cut(s)	1005
BshFI	GGCC	3 cut(s)	1445, 2091, 2464
BshNI	GGYRCC	1 cut(s)	1349
BshVI	ATCGAT	2 cut(s)	1593, 2542
BsiHKAI	GWGCWC	2 cut(s)	378, 1412
BsiHKCI	CYCGRG	2 cut(s)	1645, 1711
BsiSI	CCGG	3 cut(s)	426, 1347, 1610
BslI	CCNNNNNNNGG	3 cut(s)	160, 850, 997
BsmAI	GTCTC	4 cut(s)	280, 341, 473, 2375
BsmBI	CGTCTC	1 cut(s)	280
BsmI	GAATGC	2 cut(s)	544, 2479
BsnI	GGCC	3 cut(s)	1445, 2091, 2464
BsoBI	CYCGRG	2 cut(s)	1645, 1711
Bsp1286I	GDGCHC	3 cut(s)	378, 1412, 2295
Bsp1407I	TGTACA	1 cut(s)	407
Bsp143I	GATC	9 cut(s)	293, 304, 1234, 1288, 1486, 1690, 2199, 2539, 2543
BspACI	CCGC	2 cut(s)	58, 542
BspANI	GGCC	3 cut(s)	1445, 2091, 2464
BspCNI	CTCAG	4 cut(s)	19, 209, 1513, 1858
BspDI	ATCGAT	2 cut(s)	1593, 2542
BspLI	GGNNCC	4 cut(s)	855, 1351, 1488, 2424
BspMAI	CTGCAG	1 cut(s)	1536
BspMI	ACCTGC	1 cut(s)	2220
BspPI	GGATC	5 cut(s)	1481, 1494, 1685, 2194, 2547
BspT107I	GGYRCC	1 cut(s)	1349
BsrDI	GCAATG	2 cut(s)	1171, 2435
BsrGI	TGTACA	1 cut(s)	407
BsrI	ACTGG	3 cut(s)	844, 2092, 2541
BssMI	GATC	9 cut(s)	293, 304, 1234, 1288, 1486, 1690, 2199, 2539, 2543
BssNAI	GTATAC	1 cut(s)	740
BssNI	GRCGYC	2 cut(s)	1578, 2329
Bst1107I	GTATAC	1 cut(s)	740
Bst2UI	CCWGG	1 cut(s)	1416
Bst6I	CTCTTC	2 cut(s)	106, 339
BstACI	GRCGYC	2 cut(s)	1578, 2329
BstAPI	GCANNNNNTGC	1 cut(s)	581
BstAUI	TGTACA	1 cut(s)	407
BstC8I	GCNNGC	6 cut(s)	48, 679, 1421, 1790, 2442, 2561
BstDEI	CTNAG	7 cut(s)	27, 196, 1521, 1866, 1898, 2060, 2117
BstEII	GGTNACC	1 cut(s)	1627
BstF5I	GGATG	6 cut(s)	435, 625, 937, 1171, 1314, 2549
BstKTI	GATC	9 cut(s)	296, 307, 1237, 1291, 1489, 1693, 2202, 2542, 2546
BstMAI	GTCTC	4 cut(s)	280, 341, 473, 2375
BstMBI	GATC	9 cut(s)	293, 304, 1234, 1288, 1486, 1690, 2199, 2539, 2543
BstNI	CCWGG	1 cut(s)	1416
BstNSI	RCATGY	6 cut(s)	681, 1423, 1792, 1936, 2388, 2444
BstPI	GGTNACC	1 cut(s)	1627
BstSCI	CCNGG	2 cut(s)	425, 1414
BstSFI	CTRYAG	5 cut(s)	918, 1532, 1978, 2145, 2313
BstSLI	GKGCMC	1 cut(s)	2295
BstV1I	GCAGC	2 cut(s)	1110, 1361
BstX2I	RGATCY	2 cut(s)	293, 1486
BstYI	RGATCY	2 cut(s)	293, 1486
BstZ17I	GTATAC	1 cut(s)	740
Bsu15I	ATCGAT	2 cut(s)	1593, 2542
BsuI	GTATCC	3 cut(s)	157, 549, 1012
BsuRI	GGCC	3 cut(s)	1445, 2091, 2464
BsuTUI	ATCGAT	2 cut(s)	1593, 2542
BtgZI	GCGATG	1 cut(s)	546
BtsCI	GGATG	6 cut(s)	435, 625, 937, 1171, 1314, 2549
BtsIMutI	CAGTG	8 cut(s)	271, 638, 759, 851, 1598, 1773, 2137, 2534
BveI	ACCTGC	1 cut(s)	2220
Cac8I	GCNNGC	6 cut(s)	48, 679, 1421, 1790, 2442, 2561
CaiI	CAGNNNCTG	1 cut(s)	581
Cfr13I	GGNCC	5 cut(s)	853, 1833, 2064, 2422, 2518
ClaI	ATCGAT	2 cut(s)	1593, 2542
CseI	GACGC	3 cut(s)	1084, 1567, 2318
Csp6I	GTAC	6 cut(s)	24, 408, 1034, 1840, 2095, 2318
CviQI	GTAC	6 cut(s)	24, 408, 1034, 1840, 2095, 2318
DdeI	CTNAG	7 cut(s)	27, 196, 1521, 1866, 1898, 2060, 2117
DpnI	GATC	9 cut(s)	295, 306, 1236, 1290, 1488, 1692, 2201, 2541, 2545
DpnII	GATC	9 cut(s)	293, 304, 1234, 1288, 1486, 1690, 2199, 2539, 2543
DrdI	GACNNNNNNGTC	1 cut(s)	2080
DriI	GACNNNNNGTC	1 cut(s)	445
DseDI	GACNNNNNNGTC	1 cut(s)	2080
EaeI	YGGCCR	1 cut(s)	2089
Eam1104I	CTCTTC	2 cut(s)	106, 339
Eam1105I	GACNNNNNGTC	1 cut(s)	445
EarI	CTCTTC	2 cut(s)	106, 339
Eco32I	GATATC	1 cut(s)	1114
Eco47I	GGWCC	5 cut(s)	853, 1833, 2064, 2422, 2518
Eco57I	CTGAAG	6 cut(s)	87, 342, 1054, 1127, 1421, 1874
Eco88I	CYCGRG	2 cut(s)	1645, 1711
Eco91I	GGTNACC	1 cut(s)	1627
EcoO109I	RGGNCCY	2 cut(s)	853, 2064
EcoO65I	GGTNACC	1 cut(s)	1627
EcoRI	GAATTC	2 cut(s)	121, 2055
EcoRII	CCWGG	1 cut(s)	1414
EcoRV	GATATC	1 cut(s)	1114
EcoT22I	ATGCAT	1 cut(s)	1992
Esp3I	CGTCTC	1 cut(s)	280
FalI	AAGNNNNNCTT	8 cut(s)	311, 343, 1100, 1132, 1254, 1286, 2100, 2132
FauI	CCCGC	1 cut(s)	51
FauNDI	CATATG	4 cut(s)	117, 226, 773, 1126
FbaI	TGATCA	1 cut(s)	304
FblI	GTMKAC	2 cut(s)	739, 917
Fnu4HI	GCNGC	2 cut(s)	1099, 1375
FokI	GGATG	6 cut(s)	442, 632, 944, 1178, 1321, 2536
Fsp4HI	GCNGC	2 cut(s)	1099, 1375
FspBI	CTAG	2 cut(s)	471, 2566
GluI	GCNGC	2 cut(s)	1099, 1375
GsaI	CCCAGC	1 cut(s)	1009
GsuI	CTGGAG	2 cut(s)	827, 1488
HaeIII	GGCC	3 cut(s)	1445, 2091, 2464
HapII	CCGG	3 cut(s)	426, 1347, 1610
HgaI	GACGC	3 cut(s)	1084, 1567, 2318
Hin1I	GRCGYC	2 cut(s)	1578, 2329
HincII	GTYRAC	2 cut(s)	1605, 1878
HindII	GTYRAC	2 cut(s)	1605, 1878
HindIII	AAGCTT	2 cut(s)	1895, 2006
HpaI	GTTAAC	2 cut(s)	1605, 1878
HpaII	CCGG	3 cut(s)	426, 1347, 1610
HphI	GGTGA	7 cut(s)	314, 370, 778, 795, 1639, 1752, 2538
Hpy188III	TCNNGA	6 cut(s)	709, 1072, 1238, 1723, 1955, 2052
Hpy99I	CGWCG	2 cut(s)	97, 2334
HpyAV	CCTTC	8 cut(s)	366, 798, 810, 1078, 1102, 1435, 1568, 1898
HpyCH4IV	ACGT	2 cut(s)	208, 2033
HpyF3I	CTNAG	7 cut(s)	27, 196, 1521, 1866, 1898, 2060, 2117
HpySE526I	ACGT	2 cut(s)	208, 2033
Hsp92I	GRCGYC	2 cut(s)	1578, 2329
Ksp22I	TGATCA	1 cut(s)	304
KspAI	GTTAAC	2 cut(s)	1605, 1878
Kzo9I	GATC	9 cut(s)	293, 304, 1234, 1288, 1486, 1690, 2199, 2539, 2543
LmnI	GCTCC	2 cut(s)	664, 2113
Lsp1109I	GCAGC	2 cut(s)	1110, 1361
LweI	GCATC	6 cut(s)	238, 562, 915, 1585, 1939, 1999
MaeI	CTAG	2 cut(s)	471, 2566
MaeII	ACGT	2 cut(s)	208, 2033
MaeIII	GTNAC	6 cut(s)	447, 657, 964, 1627, 1859, 2126
MalI	GATC	9 cut(s)	295, 306, 1236, 1290, 1488, 1692, 2201, 2541, 2545
MboI	GATC	9 cut(s)	293, 304, 1234, 1288, 1486, 1690, 2199, 2539, 2543
MfeI	CAATTG	1 cut(s)	1622
MflI	RGATCY	2 cut(s)	293, 1486
MhlI	GDGCHC	3 cut(s)	378, 1412, 2295
MlsI	TGGCCA	1 cut(s)	2091
MluNI	TGGCCA	1 cut(s)	2091
MlyI	GAGTC	4 cut(s)	16, 434, 923, 1553
MmeI	TCCRAC	1 cut(s)	1244
Mox20I	TGGCCA	1 cut(s)	2091
Mph1103I	ATGCAT	1 cut(s)	1992
MroXI	GAANNNNTTC	4 cut(s)	1434, 1906, 2409, 2454
MscI	TGGCCA	1 cut(s)	2091
MslI	CAYNNNNRTG	6 cut(s)	676, 764, 1937, 2344, 2406, 2554
Msp20I	TGGCCA	1 cut(s)	2091
MspI	CCGG	3 cut(s)	426, 1347, 1610
MspR9I	CCNGG	2 cut(s)	427, 1416
MunI	CAATTG	1 cut(s)	1622
Mva1269I	GAATGC	2 cut(s)	544, 2479
MvaI	CCWGG	1 cut(s)	1416
NciI	CCSGG	1 cut(s)	427
NdeI	CATATG	4 cut(s)	117, 226, 773, 1126
NdeII	GATC	9 cut(s)	293, 304, 1234, 1288, 1486, 1690, 2199, 2539, 2543
NlaIV	GGNNCC	4 cut(s)	855, 1351, 1488, 2424
NmuCI	GTSAC	5 cut(s)	447, 657, 964, 1627, 1859
NsiI	ATGCAT	1 cut(s)	1992
NspI	RCATGY	6 cut(s)	681, 1423, 1792, 1936, 2388, 2444
OliI	CACNNNNGTG	1 cut(s)	764
PaeI	GCATGC	4 cut(s)	681, 1423, 1792, 2444
PaeR7I	CTCGAG	2 cut(s)	1645, 1711
PciI	ACATGT	1 cut(s)	1932
PctI	GAATGC	2 cut(s)	544, 2479
PdmI	GAANNNNTTC	4 cut(s)	1434, 1906, 2409, 2454
PfeI	GAWTC	9 cut(s)	218, 239, 416, 955, 1243, 1265, 1330, 1802, 2048
PflMI	CCANNNNNTGG	1 cut(s)	160
PfoI	TCCNGGA	1 cut(s)	425
PkrI	GCNGC	2 cut(s)	1100, 1376
PleI	GAGTC	4 cut(s)	15, 434, 922, 1553
PpsI	GAGTC	4 cut(s)	15, 434, 922, 1553
PpuMI	RGGWCCY	2 cut(s)	853, 2064
PscI	ACATGT	1 cut(s)	1932
PshBI	ATTAAT	1 cut(s)	2228
PsiI	TTATAA	1 cut(s)	1812
Psp5II	RGGWCCY	2 cut(s)	853, 2064
Psp6I	CCWGG	1 cut(s)	1414
PspEI	GGTNACC	1 cut(s)	1627
PspFI	CCCAGC	1 cut(s)	1005
PspGI	CCWGG	1 cut(s)	1414
PspN4I	GGNNCC	4 cut(s)	855, 1351, 1488, 2424
PspPI	GGNCC	5 cut(s)	853, 1833, 2064, 2422, 2518
PspPPI	RGGWCCY	2 cut(s)	853, 2064
PspXI	VCTCGAGB	2 cut(s)	1645, 1711
PsrI	GAACNNNNNNTAC	2 cut(s)	621, 653
PstI	CTGCAG	1 cut(s)	1536
PstNI	CAGNNNCTG	1 cut(s)	581
PsuI	RGATCY	2 cut(s)	293, 1486
RsaI	GTAC	6 cut(s)	25, 409, 1035, 1841, 2096, 2319
RsaNI	GTAC	6 cut(s)	24, 408, 1034, 1840, 2095, 2318
RseI	CAYNNNNRTG	6 cut(s)	676, 764, 1937, 2344, 2406, 2554
SatI	GCNGC	2 cut(s)	1099, 1375
Sau3AI	GATC	9 cut(s)	293, 304, 1234, 1288, 1486, 1690, 2199, 2539, 2543
Sau96I	GGNCC	5 cut(s)	853, 1833, 2064, 2422, 2518
ScaI	AGTACT	2 cut(s)	1841, 2096
SchI	GAGTC	4 cut(s)	16, 434, 923, 1553
ScrFI	CCNGG	2 cut(s)	427, 1416
SduI	GDGCHC	3 cut(s)	378, 1412, 2295
SfaNI	GCATC	6 cut(s)	238, 562, 915, 1585, 1939, 1999
SfcI	CTRYAG	5 cut(s)	918, 1532, 1978, 2145, 2313
Sfr274I	CTCGAG	2 cut(s)	1645, 1711
SinI	GGWCC	5 cut(s)	853, 1833, 2064, 2422, 2518
SlaI	CTCGAG	2 cut(s)	1645, 1711
SmiMI	CAYNNNNRTG	6 cut(s)	676, 764, 1937, 2344, 2406, 2554
SmlI	CTYRAG	4 cut(s)	272, 1645, 1711, 1723
SmoI	CTYRAG	4 cut(s)	272, 1645, 1711, 1723
SphI	GCATGC	4 cut(s)	681, 1423, 1792, 2444
SsiI	CCGC	2 cut(s)	58, 542
SspI	AATATT	1 cut(s)	1093
SspMI	CTAG	2 cut(s)	471, 2566
StyD4I	CCNGG	2 cut(s)	425, 1414
TaiI	ACGT	2 cut(s)	211, 2036
TatI	WGTACW	3 cut(s)	407, 1839, 2094
TfiI	GAWTC	9 cut(s)	218, 239, 416, 955, 1243, 1265, 1330, 1802, 2048
TscAI	CASTG	8 cut(s)	271, 638, 766, 851, 1605, 1773, 2137, 2541
TseFI	GTSAC	5 cut(s)	447, 657, 964, 1627, 1859
TseI	GCWGC	2 cut(s)	1098, 1374
Tsp45I	GTSAC	5 cut(s)	447, 657, 964, 1627, 1859
TspDTI	ATGAA	9 cut(s)	54, 134, 159, 537, 948, 1203, 1555, 1955, 2418
TspGWI	ACGGA	2 cut(s)	304, 1528
TspRI	CASTG	8 cut(s)	271, 638, 766, 851, 1605, 1773, 2137, 2541
Van91I	CCANNNNNTGG	1 cut(s)	160
VpaK11BI	GGWCC	5 cut(s)	853, 1833, 2064, 2422, 2518
VspI	ATTAAT	1 cut(s)	2228
XapI	RAATTY	5 cut(s)	121, 2039, 2055, 2266, 2453
XceI	RCATGY	6 cut(s)	681, 1423, 1792, 1936, 2388, 2444
XhoI	CTCGAG	2 cut(s)	1645, 1711
XmiI	GTMKAC	2 cut(s)	739, 917
XmnI	GAANNNNTTC	4 cut(s)	1434, 1906, 2409, 2454
XspI	CTAG	2 cut(s)	471, 2566
ZrmI	AGTACT	2 cut(s)	1841, 2096
Zsp2I	ATGCAT	1 cut(s)	1992

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.