pycom04g12370

Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
N/A
Physical Location & Seq
Reverse (-)
15347619 .. 15348088
470 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 255 bp
ATGGAGGTGTCACGACATTGGCGGTACGGTGAATTTTTCTCTTTTACCACATCTTCACACCCAAATCTTGCAACTATATATGGAGCAGGGTGGCCGTACTATGCATTTTTGGGGGTTGCATTTGGACAATTAGCTTGGCAAATATCAACCGTTGATCTTTCATGCCCAGCTGATTGCAATAGAAAATTTGTGTCGAACAAGTGGTTTGGCGCTATTATGTTCATCGCAATCCTATTTGGACGACTTTCATCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

85

Amino Acids

9.54

Weight (kDa)

8.74

Isoelectric Point (pI)

29.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 22
AcoI YGGCCR 1 cut(s) 92
AcsI RAATTY 2 cut(s) 32, 185
AfaI GTAC 2 cut(s) 26, 98
AluBI AGCT 2 cut(s) 134, 170
AluI AGCT 2 cut(s) 134, 170
AoxI GGCC 1 cut(s) 92
ApoI RAATTY 2 cut(s) 32, 185
AspLEI GCGC 1 cut(s) 212
AsuHPI GGTGA 1 cut(s) 41
BceAI ACGGC 1 cut(s) 79
BfoI RGCGCY 1 cut(s) 213
BseYI CCCAGC 1 cut(s) 166
BshFI GGCC 1 cut(s) 94
BsnI GGCC 1 cut(s) 94
Bsp143I GATC 1 cut(s) 154
BspACI CCGC 1 cut(s) 22
BspANI GGCC 1 cut(s) 94
BssMI GATC 1 cut(s) 154
Bst4CI ACNGT 2 cut(s) 29, 151
BstH2I RGCGCY 1 cut(s) 213
BstHHI GCGC 1 cut(s) 212
BstKTI GATC 1 cut(s) 157
BstMBI GATC 1 cut(s) 154
BsuRI GGCC 1 cut(s) 94
BtgZI GCGATG 1 cut(s) 208
CfoI GCGC 1 cut(s) 212
Csp6I GTAC 2 cut(s) 25, 97
CviAII CATG 1 cut(s) 162
CviJI RGCY 3 cut(s) 94, 134, 170
CviKI_1 RGCY 3 cut(s) 94, 134, 170
CviQI GTAC 2 cut(s) 25, 97
DpnI GATC 1 cut(s) 156
DpnII GATC 1 cut(s) 154
EaeI YGGCCR 1 cut(s) 92
EcoT22I ATGCAT 1 cut(s) 106
FaeI CATG 1 cut(s) 165
FaiI YATR 7 cut(s) 77, 79, 81, 102, 163, 218, 253
FatI CATG 1 cut(s) 161
GlaI GCGC 1 cut(s) 211
GsaI CCCAGC 1 cut(s) 170
HaeII RGCGCY 1 cut(s) 213
HaeIII GGCC 1 cut(s) 94
HhaI GCGC 1 cut(s) 212
Hin1II CATG 1 cut(s) 165
Hin6I GCGC 1 cut(s) 210
HinP1I GCGC 1 cut(s) 210
HphI GGTGA 1 cut(s) 41
Hpy188III TCNNGA 1 cut(s) 12
HpyCH4III ACNGT 2 cut(s) 29, 151
HpyCH4V TGCA 4 cut(s) 71, 104, 119, 177
Hsp92II CATG 1 cut(s) 165
HspAI GCGC 1 cut(s) 210
Kzo9I GATC 1 cut(s) 154
LmnI GCTCC 1 cut(s) 83
LpnPI CCDG 2 cut(s) 72, 180
MaeIII GTNAC 1 cut(s) 9
MalI GATC 1 cut(s) 156
MboI GATC 1 cut(s) 154
MboII GAAGA 1 cut(s) 45
MluCI AATT 3 cut(s) 32, 128, 185
Mph1103I ATGCAT 1 cut(s) 106
MspA1I CMGCKG 1 cut(s) 170
NdeII GATC 1 cut(s) 154
NlaIII CATG 1 cut(s) 165
NmuCI GTSAC 1 cut(s) 9
NsiI ATGCAT 1 cut(s) 106
PspFI CCCAGC 1 cut(s) 166
PvuII CAGCTG 1 cut(s) 170
RsaI GTAC 2 cut(s) 26, 98
RsaNI GTAC 2 cut(s) 25, 97
Sau3AI GATC 1 cut(s) 154
SetI ASST 3 cut(s) 9, 136, 172
SgeI CNNG 7 cut(s) 24, 80, 99, 147, 174, 179, 211
Sse9I AATT 3 cut(s) 32, 128, 185
SsiI CCGC 1 cut(s) 22
TaaI ACNGT 2 cut(s) 29, 151
TaqI TCGA 1 cut(s) 194
TasI AATT 3 cut(s) 32, 128, 185
TseFI GTSAC 1 cut(s) 9
Tsp45I GTSAC 1 cut(s) 9
TspDTI ATGAA 3 cut(s) 150, 211, 237
XapI RAATTY 2 cut(s) 32, 185
Zsp2I ATGCAT 1 cut(s) 106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.