pycom04g14960

Protein of unknown function (DUF2985)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
N/A
Physical Location & Seq
Reverse (-)
17764879 .. 17765079
201 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 201 bp
ATGTATATGCACACTGCAACATTTCTCCTCTTCCGCACAGCCCCATTTTGGATCCTCAGTTTGGCTGCCTCCCATATCGACAACGAAATTGCAAGAGAAGCCTTGATTTTAACTGGCATTGTCGTTTTGTATATCTGGTTTGCTGTACGGTGGCTTCTGGAGAATCCAAATGAGGAAGAGATTCAACTTGCCGGCGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

67

Amino Acids

7.66

Weight (kDa)

4.73

Isoelectric Point (pI)

68.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 34
AclWI GGATC 2 cut(s) 46, 59
AfaI GTAC 1 cut(s) 147
AfiI CCNNNNNNNGG 2 cut(s) 48, 61
AgsI TTSAA 1 cut(s) 185
AlwI GGATC 2 cut(s) 46, 59
ApeKI GCWGC 1 cut(s) 65
Asp700I GAANNNNTTC 1 cut(s) 180
BamHI GGATCC 1 cut(s) 51
BarI GAAGNNNNNNTAC 2 cut(s) 138, 170
BbvI GCAGC 1 cut(s) 52
BisI GCNGC 1 cut(s) 66
BlsI GCNGC 1 cut(s) 67
BmiI GGNNCC 1 cut(s) 53
BpmI CTGGAG 1 cut(s) 179
Bsc4I CCNNNNNNNGG 2 cut(s) 48, 61
Bse118I RCCGGY 1 cut(s) 191
Bse1I ACTGG 1 cut(s) 118
BseLI CCNNNNNNNGG 2 cut(s) 48, 61
BseMII CTCAG 1 cut(s) 70
BseNI ACTGG 1 cut(s) 118
BseRI GAGGAG 1 cut(s) 17
BseXI GCAGC 1 cut(s) 52
BsiSI CCGG 1 cut(s) 192
BslI CCNNNNNNNGG 2 cut(s) 48, 61
Bsp143I GATC 1 cut(s) 51
BspACI CCGC 1 cut(s) 34
BspCNI CTCAG 1 cut(s) 69
BspLI GGNNCC 1 cut(s) 53
BspPI GGATC 2 cut(s) 46, 59
BsrFI RCCGGY 1 cut(s) 191
BsrI ACTGG 1 cut(s) 118
BssAI RCCGGY 1 cut(s) 191
BssMI GATC 1 cut(s) 51
Bst4CI ACNGT 1 cut(s) 150
Bst6I CTCTTC 2 cut(s) 35, 171
BstC8I GCNNGC 1 cut(s) 193
BstDEI CTNAG 1 cut(s) 56
BstKTI GATC 1 cut(s) 54
BstMBI GATC 1 cut(s) 51
BstMWI GCNNNNNNNGC 1 cut(s) 98
BstV1I GCAGC 1 cut(s) 52
BstX2I RGATCY 1 cut(s) 51
BstYI RGATCY 1 cut(s) 51
BtsI GCAGTG 1 cut(s) 12
BtsIMutI CAGTG 1 cut(s) 12
Cac8I GCNNGC 1 cut(s) 193
Cfr10I RCCGGY 1 cut(s) 191
Csp6I GTAC 1 cut(s) 146
CviJI RGCY 4 cut(s) 41, 65, 101, 154
CviKI_1 RGCY 4 cut(s) 41, 65, 101, 154
CviQI GTAC 1 cut(s) 146
DdeI CTNAG 1 cut(s) 56
DpnI GATC 1 cut(s) 53
DpnII GATC 1 cut(s) 51
Eam1104I CTCTTC 2 cut(s) 35, 171
EarI CTCTTC 2 cut(s) 35, 171
FaiI YATR 4 cut(s) 6, 8, 75, 132
Fnu4HI GCNGC 1 cut(s) 66
Fsp4HI GCNGC 1 cut(s) 66
GluI GCNGC 1 cut(s) 66
GsuI CTGGAG 1 cut(s) 179
HapII CCGG 1 cut(s) 192
HinfI GANTC 2 cut(s) 163, 181
HpaII CCGG 1 cut(s) 192
Hpy188III TCNNGA 1 cut(s) 158
HpyCH4III ACNGT 1 cut(s) 150
HpyCH4V TGCA 3 cut(s) 10, 17, 92
HpyF10VI GCNNNNNNNGC 1 cut(s) 98
HpyF3I CTNAG 1 cut(s) 56
KroI GCCGGC 1 cut(s) 191
KroNI GCCGGC 1 cut(s) 193
Kzo9I GATC 1 cut(s) 51
LpnPI CCDG 3 cut(s) 99, 121, 143
Lsp1109I GCAGC 1 cut(s) 52
MalI GATC 1 cut(s) 53
MboI GATC 1 cut(s) 51
MboII GAAGA 2 cut(s) 22, 188
MflI RGATCY 1 cut(s) 51
MluCI AATT 1 cut(s) 87
MnlI CCTC 4 cut(s) 38, 65, 79, 166
MroNI GCCGGC 1 cut(s) 191
MroXI GAANNNNTTC 1 cut(s) 180
MseI TTAA 1 cut(s) 110
MspI CCGG 1 cut(s) 192
MwoI GCNNNNNNNGC 1 cut(s) 98
NaeI GCCGGC 1 cut(s) 193
NdeII GATC 1 cut(s) 51
NgoMIV GCCGGC 1 cut(s) 191
NlaIV GGNNCC 1 cut(s) 53
PdiI GCCGGC 1 cut(s) 193
PdmI GAANNNNTTC 1 cut(s) 180
PfeI GAWTC 2 cut(s) 163, 181
PkrI GCNGC 1 cut(s) 67
PspN4I GGNNCC 1 cut(s) 53
PsuI RGATCY 1 cut(s) 51
RsaI GTAC 1 cut(s) 147
RsaNI GTAC 1 cut(s) 146
SaqAI TTAA 1 cut(s) 110
SatI GCNGC 1 cut(s) 66
Sau3AI GATC 1 cut(s) 51
SgeI CNNG 5 cut(s) 105, 115, 126, 148, 170
Sse9I AATT 1 cut(s) 87
SsiI CCGC 1 cut(s) 34
TaaI ACNGT 1 cut(s) 150
TaqI TCGA 1 cut(s) 78
TasI AATT 1 cut(s) 87
TfiI GAWTC 2 cut(s) 163, 181
Tru1I TTAA 1 cut(s) 110
Tru9I TTAA 1 cut(s) 110
TscAI CASTG 1 cut(s) 19
TseI GCWGC 1 cut(s) 65
TspRI CASTG 1 cut(s) 19
XmnI GAANNNNTTC 1 cut(s) 180
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.