pycom04g16250

Protein of unknown function, DUF599

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
N/A
Physical Location & Seq
Forward (+)
18975025 .. 18975396
372 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 372 bp
ATGCATTTAAAAATAATTAATTTAAAAAAAAAAACCCAGAACCCCATCCCTTCCCTTTCCCCGCAACTCCCATCCCTTTCTTCGACAATCTCAGCTTCTCGTCTCCGGCCTCCACCTTCTTCCAACACCATCAGGACCACCAATACTACAATGAGCAGATCCACAACCACCACCACCATCGATCAGCGTCCATCCGGCCTCCTCCTTGAACATCTTCACCACCGATCAGCTATGGGTTTTCAGAAGGAGTACTTAGATGTTGTGCTGGTCCCGTTCGGACTGCTGATCATGCTAATCTACCACCTCTTCCTCCTCTACGAATACATCAATCACCCTCTCTCCATTGCCATTGGATCTGAAAACATTGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

124

Amino Acids

13.83

Weight (kDa)

9.69

Isoelectric Point (pI)

54.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes

No orthologs found for this gene in the current database.

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 62
AclWI GGATC 2 cut(s) 153, 361
AfaI GTAC 1 cut(s) 251
AgsI TTSAA 1 cut(s) 209
AluBI AGCT 2 cut(s) 95, 230
AluI AGCT 2 cut(s) 95, 230
Alw26I GTCTC 1 cut(s) 107
AlwI GGATC 2 cut(s) 153, 361
AoxI GGCC 2 cut(s) 107, 196
AseI ATTAAT 1 cut(s) 18
Asp700I GAANNNNTTC 1 cut(s) 213
AspS9I GGNCC 2 cut(s) 135, 268
AsuHPI GGTGA 2 cut(s) 209, 323
AvaII GGWCC 2 cut(s) 135, 268
BccI CCATC 5 cut(s) 53, 79, 137, 185, 199
BclI TGATCA 1 cut(s) 285
BcoDI GTCTC 1 cut(s) 107
BmcAI AGTACT 1 cut(s) 251
Bme18I GGWCC 2 cut(s) 135, 268
BmgT120I GGNCC 2 cut(s) 135, 268
BmiI GGNNCC 1 cut(s) 270
Bsa29I ATCGAT 1 cut(s) 180
BsaXI ACNNNNNCTCC 2 cut(s) 323, 353
Bse3DI GCAATG 1 cut(s) 342
BseCI ATCGAT 1 cut(s) 180
BseGI GGATG 3 cut(s) 45, 71, 191
BseMI GCAATG 1 cut(s) 342
BseMII CTCAG 1 cut(s) 105
BseRI GAGGAG 2 cut(s) 191, 302
BshFI GGCC 2 cut(s) 109, 198
BshVI ATCGAT 1 cut(s) 180
BsiSI CCGG 2 cut(s) 106, 195
BslFI GGGAC 1 cut(s) 254
BsmAI GTCTC 1 cut(s) 107
BsmBI CGTCTC 1 cut(s) 107
BsmFI GGGAC 1 cut(s) 254
BsnI GGCC 2 cut(s) 109, 198
Bsp143I GATC 5 cut(s) 158, 181, 224, 285, 353
BspACI CCGC 1 cut(s) 62
BspANI GGCC 2 cut(s) 109, 198
BspCNI CTCAG 1 cut(s) 104
BspDI ATCGAT 1 cut(s) 180
BspLI GGNNCC 1 cut(s) 270
BspPI GGATC 2 cut(s) 153, 361
BsrDI GCAATG 1 cut(s) 342
BssMI GATC 5 cut(s) 158, 181, 224, 285, 353
Bst6I CTCTTC 1 cut(s) 311
BstDEI CTNAG 2 cut(s) 91, 253
BstF5I GGATG 3 cut(s) 45, 71, 191
BstKTI GATC 5 cut(s) 161, 184, 227, 288, 356
BstMAI GTCTC 1 cut(s) 107
BstMBI GATC 5 cut(s) 158, 181, 224, 285, 353
BstMWI GCNNNNNNNGC 1 cut(s) 289
BstX2I RGATCY 2 cut(s) 158, 353
BstYI RGATCY 2 cut(s) 158, 353
Bsu15I ATCGAT 1 cut(s) 180
BsuRI GGCC 2 cut(s) 109, 198
BsuTUI ATCGAT 1 cut(s) 180
BtsCI GGATG 3 cut(s) 45, 71, 191
Cfr13I GGNCC 2 cut(s) 135, 268
ClaI ATCGAT 1 cut(s) 180
CseI GACGC 1 cut(s) 176
Csp6I GTAC 1 cut(s) 250
CviAII CATG 1 cut(s) 289
CviJI RGCY 4 cut(s) 95, 109, 198, 230
CviKI_1 RGCY 4 cut(s) 95, 109, 198, 230
CviQI GTAC 1 cut(s) 250
DdeI CTNAG 2 cut(s) 91, 253
DpnI GATC 5 cut(s) 160, 183, 226, 287, 355
DpnII GATC 5 cut(s) 158, 181, 224, 285, 353
DraI TTTAAA 2 cut(s) 9, 24
Eam1104I CTCTTC 1 cut(s) 311
EarI CTCTTC 1 cut(s) 311
Eco47I GGWCC 2 cut(s) 135, 268
EcoT22I ATGCAT 1 cut(s) 6
Esp3I CGTCTC 1 cut(s) 107
FaeI CATG 1 cut(s) 292
FaiI YATR 2 cut(s) 233, 290
FalI AAGNNNNNCTT 2 cut(s) 236, 268
FaqI GGGAC 1 cut(s) 254
FatI CATG 1 cut(s) 288
FauI CCCGC 1 cut(s) 69
FbaI TGATCA 1 cut(s) 285
FokI GGATG 3 cut(s) 32, 58, 178
HaeIII GGCC 2 cut(s) 109, 198
HapII CCGG 2 cut(s) 106, 195
HgaI GACGC 1 cut(s) 176
Hin1II CATG 1 cut(s) 292
HpaII CCGG 2 cut(s) 106, 195
HphI GGTGA 2 cut(s) 209, 323
Hpy188I TCNGA 3 cut(s) 243, 278, 358
Hpy188III TCNNGA 1 cut(s) 133
HpyAV CCTTC 3 cut(s) 60, 126, 238
HpyCH4V TGCA 1 cut(s) 4
HpyF10VI GCNNNNNNNGC 1 cut(s) 289
HpyF3I CTNAG 2 cut(s) 91, 253
Hsp92II CATG 1 cut(s) 292
Ksp22I TGATCA 1 cut(s) 285
Kzo9I GATC 5 cut(s) 158, 181, 224, 285, 353
LpnPI CCDG 5 cut(s) 50, 118, 119, 208, 251
MalI GATC 5 cut(s) 160, 183, 226, 287, 355
MboI GATC 5 cut(s) 158, 181, 224, 285, 353
MboII GAAGA 4 cut(s) 72, 111, 206, 298
MflI RGATCY 2 cut(s) 158, 353
MluCI AATT 2 cut(s) 15, 19
MmeI TCCRAC 1 cut(s) 147
MnlI CCTC 7 cut(s) 120, 209, 212, 314, 320, 323, 345
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 1 cut(s) 213
MseI TTAA 3 cut(s) 8, 18, 23
MspI CCGG 2 cut(s) 106, 195
MwoI GCNNNNNNNGC 1 cut(s) 289
NdeII GATC 5 cut(s) 158, 181, 224, 285, 353
NlaIII CATG 1 cut(s) 292
NlaIV GGNNCC 1 cut(s) 270
NsiI ATGCAT 1 cut(s) 6
PdmI GAANNNNTTC 1 cut(s) 213
PshBI ATTAAT 1 cut(s) 18
PspN4I GGNNCC 1 cut(s) 270
PspPI GGNCC 2 cut(s) 135, 268
PsuI RGATCY 2 cut(s) 158, 353
RsaI GTAC 1 cut(s) 251
RsaNI GTAC 1 cut(s) 250
SaqAI TTAA 3 cut(s) 8, 18, 23
Sau3AI GATC 5 cut(s) 158, 181, 224, 285, 353
Sau96I GGNCC 2 cut(s) 135, 268
ScaI AGTACT 1 cut(s) 251
SetI ASST 4 cut(s) 97, 118, 232, 306
SinI GGWCC 2 cut(s) 135, 268
Sse9I AATT 2 cut(s) 15, 19
SsiI CCGC 1 cut(s) 62
TaqI TCGA 2 cut(s) 83, 180
TasI AATT 2 cut(s) 15, 19
TatI WGTACW 1 cut(s) 249
Tru1I TTAA 3 cut(s) 8, 18, 23
Tru9I TTAA 3 cut(s) 8, 18, 23
VpaK11BI GGWCC 2 cut(s) 135, 268
VspI ATTAAT 1 cut(s) 18
XmnI GAANNNNTTC 1 cut(s) 213
ZrmI AGTACT 1 cut(s) 251
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.